BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013353
         (1753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containi...   656   0.0  
ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containi...   577   e-162
ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|2...   572   e-160
ref|NP_171976.1| pentatricopeptide repeat-containing protein [Ar...   468   e-129
ref|XP_002892245.1| pentatricopeptide repeat-containing protein ...   462   e-128

>ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            [Vitis vinifera]
          Length = 677

 Score =  656 bits (1693), Expect = 0.0
 Identities = 318/547 (58%), Positives = 417/547 (76%), Gaps = 1/547 (0%)
 Frame = -2

Query: 1638 HVPTKTPVNISQNQLENQLIALIHSSKTTQQVKQIHAQLFPYNLYSNSRIITQLISCLLS 1459
            H P+++P        E   I LIH+S T  Q+ QIHAQ+F +NL+SNSR++TQLIS   S
Sbjct: 33   HGPSRSP--------ETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCS 84

Query: 1458 THKTFIAYSLRIFKFFPEPRNVFIFNAVIRGLTENKYYKRSIFYFKLMLSQNVRPDRLTF 1279
                 + Y+L IF+ F  P N+F+FNA+IRGL EN  ++ S+ +F LML  ++RPDRLT 
Sbjct: 85   LKS--LDYALSIFRCFDHP-NLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTL 141

Query: 1278 PFVLIAIGGLGESYDAYSLSSVVYGQIMKLGLEFDTFVRVSLVDLYVKVGSLSLALQVFD 1099
            PFVL ++  L +      L   ++G +MKLGLEFD+FVRVSLVD+YVK+G L   LQ+FD
Sbjct: 142  PFVLKSVAALVD----VGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFD 197

Query: 1098 ESSERNKAESILLWNIVVKGSCKNGQVEKAIEVFEAMPERNLGSWNSLVDGLMRNGEVDK 919
            ES +RNKAESILLWN+++ G CK G + KA  +FEAMPERN GSWNSL++G +RNG++D+
Sbjct: 198  ESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDR 257

Query: 918  AI*YFGIMDERNVVSWTTVMHGLSMNGMHERALELFFQMIEEGVTPNDLTIVSALSACAK 739
            A   F  M E+NVVSWTT+++G S NG HE+AL +F++M+EEGV PNDLT+VSAL AC K
Sbjct: 258  ARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTK 317

Query: 738  IGAFDVGKKVHDCIEANKRRINLAVGNALLDMYCKCGYVEIASHIFDEMKVKDIRTWSIL 559
            IGA  VG+++H+ + +N  ++N  +G AL+DMY KCG ++ AS +F E K KD+ TWS++
Sbjct: 318  IGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVM 377

Query: 558  IWGWAINGCFEQSMLCFEKMK-LGIKPDEVTFVAALTACSHAGKIDKGLQLFDSMKSDYS 382
            IWGWAI+GCF+Q++ CF KMK  GI PDEV F+A LTACSH+G +D+GL  F+SM+ DYS
Sbjct: 378  IWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYS 437

Query: 381  IKPTMKHYAIIVDIYGRAGLLNEALNFIENMPQNPDPVVWGTLFSACRARKNIDIAKLAS 202
            I+PTMKHY +IVD+ GRAG L+EAL+FI++MP NPD V+WG LF ACRA KNI++A+L +
Sbjct: 438  IEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTA 497

Query: 201  QKLLELEPKHPGSYVFLSNVYAGLGRWEDVEDLRTSMKRKGVGKDPGWSCIAVNEKMHSF 22
            +KLL+LEPKHPGSYVFLSNVYA +GRWEDVE +RT MK +GV KDPGWS I V  ++HSF
Sbjct: 498  EKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSF 557

Query: 21   VAGDQTH 1
            VAGD  H
Sbjct: 558  VAGDHAH 564


>ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            [Cucumis sativus] gi|449505311|ref|XP_004162432.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  577 bits (1488), Expect = e-162
 Identities = 283/533 (53%), Positives = 384/533 (72%), Gaps = 1/533 (0%)
 Frame = -2

Query: 1596 LENQLIALIHSSKTTQQVKQIHAQLFPYNLYSNSRIITQLISCLLSTHKTFIAYSLRIFK 1417
            LE   I LIH+S +T +++QIH QL+  N++S+SR++TQ IS   S +   + Y++ IF+
Sbjct: 41   LETHFIDLIHASNSTHKLRQIHGQLYRCNVFSSSRVVTQFISSCSSLNS--VDYAISIFQ 98

Query: 1416 FFPEPRNVFIFNAVIRGLTENKYYKRSIFYFKLMLSQNVRPDRLTFPFVLIAIGGLGESY 1237
             F E +N ++FNA+IRGL EN  ++ SI +F LML   + PDRLTFPFVL +   L    
Sbjct: 99   RF-ELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNG- 156

Query: 1236 DAYSLSSVVYGQIMKLGLEFDTFVRVSLVDLYVKVGSLSLALQVFDESSERNKAESILLW 1057
                +   ++  I+K GLEFD+FVRVSLVD+YVKV  L  AL+VFDES E  K  S+L+W
Sbjct: 157  ---GVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIW 213

Query: 1056 NIVVKGSCKNGQVEKAIEVFEAMPERNLGSWNSLVDGLMRNGEVDKAI*YFGIMDERNVV 877
            N+++ G C+ G + KA E+F++MP+++ GSWNSL++G M+ G++ +A   F  M E+NVV
Sbjct: 214  NVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVV 273

Query: 876  SWTTVMHGLSMNGMHERALELFFQMIEEGVTPNDLTIVSALSACAKIGAFDVGKKVHDCI 697
            SWTT+++G S NG  E+ALE FF M+EEG  PND TIVSALSACAKIGA D G ++H+ +
Sbjct: 274  SWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYL 333

Query: 696  EANKRRINLAVGNALLDMYCKCGYVEIASHIFDEMKVKDIRTWSILIWGWAINGCFEQSM 517
              N  ++NL +G AL+DMY KCG +E A  +F E K K +  WS++IWGWAI+G F +++
Sbjct: 334  SGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKAL 393

Query: 516  LCFEKMKL-GIKPDEVTFVAALTACSHAGKIDKGLQLFDSMKSDYSIKPTMKHYAIIVDI 340
              FE MK  G KPD V F+A L ACSH+G++++GL+ FD+M+  Y I+P+MKHY ++VD+
Sbjct: 394  QYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDM 453

Query: 339  YGRAGLLNEALNFIENMPQNPDPVVWGTLFSACRARKNIDIAKLASQKLLELEPKHPGSY 160
             GRAG L+EAL FI  MP  PD VVWG LF ACR  KN+++A+LAS+KLL+LEPKHPGSY
Sbjct: 454  LGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSY 513

Query: 159  VFLSNVYAGLGRWEDVEDLRTSMKRKGVGKDPGWSCIAVNEKMHSFVAGDQTH 1
            VFLSN YA +GRW+D E +R SM+  G  KDPGWS I V+ K+H FVAGD TH
Sbjct: 514  VFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTH 566


>ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|222847424|gb|EEE84971.1|
            predicted protein [Populus trichocarpa]
          Length = 719

 Score =  572 bits (1473), Expect = e-160
 Identities = 286/552 (51%), Positives = 387/552 (70%), Gaps = 2/552 (0%)
 Frame = -2

Query: 1650 LKLFHVPTKTPVNISQNQLENQLIALIHSSKTTQQVKQIHAQLFPYNLYSNSRIITQLIS 1471
            L    +P  TP        E   I+LIH SKT  Q+ QIHAQ+  +NL S+S I TQLIS
Sbjct: 69   LSALFIPPTTPT-------EAHFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLIS 121

Query: 1470 CLLSTHKTFIAYSLRIFKFFPEPRNVFIFNAVIRGLTENKYYKRSIFYFKLMLSQNVRPD 1291
               S+ +  I +SL +F    +P+N+F FNA+IRGLT N ++  +IF+F+LML   ++PD
Sbjct: 122  S--SSLRKSINHSLAVFNHH-KPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPD 178

Query: 1290 RLTFPFVLIAIGGLGESYDAYSLSSVVYGQIMKLGLEFDTFVRVSLVDLYVKVGSLSLAL 1111
            RLT+PFVL ++ GL  +     L   ++  I++ G+E D+FVRVSLVD+YVKV  L  A 
Sbjct: 179  RLTYPFVLKSMAGLFST----ELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAF 234

Query: 1110 QVFDESSER-NKAESILLWNIVVKGSCKNGQVEKAIEVFEAMPERNLGSWNSLVDGLMRN 934
            +VFDES ER +   S LLWN+++KG CK G ++KA+++F+AMP++   SW++L+DG  +N
Sbjct: 235  KVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKN 294

Query: 933  GEVDKAI*YFGIMDERNVVSWTTVMHGLSMNGMHERALELFFQMIEEGVTPNDLTIVSAL 754
            G++D+A+  F  M E+NVVSWTT++ G S NG  E+AL +F +M+EEGV PN  TIVSAL
Sbjct: 295  GDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSAL 354

Query: 753  SACAKIGAFDVGKKVHDCIEANKRRINLAVGNALLDMYCKCGYVEIASHIFDEMKVKDIR 574
            SACAKIG  + G ++H  I+ N   +  A+G AL+DMY KCG +E AS +F E + K IR
Sbjct: 355  SACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIR 414

Query: 573  TWSILIWGWAINGCFEQSMLCFEKMKL-GIKPDEVTFVAALTACSHAGKIDKGLQLFDSM 397
            TW+++IWGWAI+G  EQ++ CF++M   GIKPDEV F+A LTAC H+G++D GL  FDSM
Sbjct: 415  TWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSM 474

Query: 396  KSDYSIKPTMKHYAIIVDIYGRAGLLNEALNFIENMPQNPDPVVWGTLFSACRARKNIDI 217
            + DY I+P+MKHY +IVD+ GR+G L EAL FIE MP NPD V+WG LF ACRA K   +
Sbjct: 475  RLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKM 534

Query: 216  AKLASQKLLELEPKHPGSYVFLSNVYAGLGRWEDVEDLRTSMKRKGVGKDPGWSCIAVNE 37
            AK A  KLL+LEP H G+Y+FLSN YA LG+WED E +R  M+ +GV K+ GWSCI V  
Sbjct: 535  AKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEG 594

Query: 36   KMHSFVAGDQTH 1
            ++H FV+GD  H
Sbjct: 595  QVHRFVSGDHDH 606


>ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g04840 gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17
            [Arabidopsis thaliana] gi|332189629|gb|AEE27750.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 665

 Score =  468 bits (1204), Expect = e-129
 Identities = 239/532 (44%), Positives = 352/532 (66%), Gaps = 1/532 (0%)
 Frame = -2

Query: 1593 ENQLIALIHSSKTTQQVKQIHAQLFPYNLYSNSRIITQLISCLLSTHKTFIAYSLRIFKF 1414
            E+  I+LIH+ K T  ++ +HAQ+    + S SR+  QL+SC  S+      YSL IF+ 
Sbjct: 29   ESHFISLIHACKDTASLRHVHAQILRRGVLS-SRVAAQLVSC--SSLLKSPDYSLSIFRN 85

Query: 1413 FPEPRNVFIFNAVIRGLTENKYYKRSIFYFKLMLSQNVRPDRLTFPFVLIAIGGLGESYD 1234
              E RN F+ NA+IRGLTEN  ++ S+ +F LML   V+PDRLTFPFVL +   LG  + 
Sbjct: 86   -SEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRW- 143

Query: 1233 AYSLSSVVYGQIMKLGLEFDTFVRVSLVDLYVKVGSLSLALQVFDESSERNKAESILLWN 1054
               L   ++   +K  ++ D+FVR+SLVD+Y K G L  A QVF+ES +R K ESIL+WN
Sbjct: 144  ---LGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200

Query: 1053 IVVKGSCKNGQVEKAIEVFEAMPERNLGSWNSLVDGLMRNGEVDKAI*YFGIMDERNVVS 874
            +++ G C+   +  A  +F +MPERN GSW++L+ G + +GE+++A   F +M E+NVVS
Sbjct: 201  VLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVS 260

Query: 873  WTTVMHGLSMNGMHERALELFFQMIEEGVTPNDLTIVSALSACAKIGAFDVGKKVHDCIE 694
            WTT+++G S  G +E A+  +F+M+E+G+ PN+ TI + LSAC+K GA   G ++H  I 
Sbjct: 261  WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL 320

Query: 693  ANKRRINLAVGNALLDMYCKCGYVEIASHIFDEMKVKDIRTWSILIWGWAINGCFEQSML 514
             N  +++ A+G AL+DMY KCG ++ A+ +F  M  KDI +W+ +I GWA++G F Q++ 
Sbjct: 321  DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQ 380

Query: 513  CFEKMKL-GIKPDEVTFVAALTACSHAGKIDKGLQLFDSMKSDYSIKPTMKHYAIIVDIY 337
            CF +M   G KPDEV F+A LTAC ++ ++D GL  FDSM+ DY+I+PT+KHY ++VD+ 
Sbjct: 381  CFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLL 440

Query: 336  GRAGLLNEALNFIENMPQNPDPVVWGTLFSACRARKNIDIAKLASQKLLELEPKHPGSYV 157
            GRAG LNEA   +ENMP NPD   W  L+ AC+A K    A+  SQ LLEL+P+  GSY+
Sbjct: 441  GRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYI 500

Query: 156  FLSNVYAGLGRWEDVEDLRTSMKRKGVGKDPGWSCIAVNEKMHSFVAGDQTH 1
            FL   +A  G  +DVE  R S++++   +  GWS I ++ +++ F AGD +H
Sbjct: 501  FLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSH 552


>ref|XP_002892245.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297338087|gb|EFH68504.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 664

 Score =  462 bits (1190), Expect = e-128
 Identities = 239/532 (44%), Positives = 355/532 (66%), Gaps = 1/532 (0%)
 Frame = -2

Query: 1593 ENQLIALIHSSKTTQQVKQIHAQLFPYNLYSNSRIITQLISCLLSTHKTFIAYSLRIFKF 1414
            E+  I+LIH+ K T  ++ +HA +    + S SR+  QL+SC  S+      YSL IF+ 
Sbjct: 29   ESHFISLIHTCKDTVSLRLVHAHILRRGVLS-SRVAAQLVSC--SSLLKSPDYSLSIFRN 85

Query: 1413 FPEPRNVFIFNAVIRGLTENKYYKRSIFYFKLMLSQNVRPDRLTFPFVLIAIGGLGESYD 1234
              E RN F+FNA+IRGLTEN  ++ S+ +F LML+  V+PDRLTFPFVL +   LG  + 
Sbjct: 86   -SEERNPFVFNALIRGLTENARFECSVRHFILMLTLGVKPDRLTFPFVLKSNSKLGFRW- 143

Query: 1233 AYSLSSVVYGQIMKLGLEFDTFVRVSLVDLYVKVGSLSLALQVFDESSERNKAESILLWN 1054
               L   ++   +K  ++ D+FVRVSLVD+Y K G L+ A QVF+E+ +R K ESILLWN
Sbjct: 144  ---LGRALHAATLKNFVDCDSFVRVSLVDMYAKTGQLNHAFQVFEETPDRIKKESILLWN 200

Query: 1053 IVVKGSCKNGQVEKAIEVFEAMPERNLGSWNSLVDGLMRNGEVDKAI*YFGIMDERNVVS 874
            ++V G C+   ++ A  +F +MPERN GSW++L+ G + NGE+++A   F +M E+NVVS
Sbjct: 201  VLVNGYCRAKDMQMATTLFRSMPERNSGSWSTLIKGYVDNGELNRAKQLFELMPEKNVVS 260

Query: 873  WTTVMHGLSMNGMHERALELFFQMIEEGVTPNDLTIVSALSACAKIGAFDVGKKVHDCIE 694
            WTT+++G S  G +E A+  +F+M+E+G+ PN+ T+ + LSAC+K GA   G ++H  I 
Sbjct: 261  WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSKSGALGSGIRIHGYIL 320

Query: 693  ANKRRINLAVGNALLDMYCKCGYVEIASHIFDEMKVKDIRTWSILIWGWAINGCFEQSML 514
             N  +++ A+G +LLDMY KCG V+ A+ +F  M  KDI +W+ +I GWA++G F Q++ 
Sbjct: 321  DNGIKLDRAIGTSLLDMYAKCGEVDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQ 380

Query: 513  CFEKMKL-GIKPDEVTFVAALTACSHAGKIDKGLQLFDSMKSDYSIKPTMKHYAIIVDIY 337
            CF +M   G KPDEV F+A LTAC ++G++D GL  FDSM+ DY+I+PT+KHY ++VD+ 
Sbjct: 381  CFRQMMYSGEKPDEVVFLAVLTACLNSGEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLL 440

Query: 336  GRAGLLNEALNFIENMPQNPDPVVWGTLFSACRARKNIDIAKLASQKLLELEPKHPGSYV 157
            GRAG L+EA   +E MP NPD   W  L+ AC+A K+ +   +  Q LLEL+P+  GSY+
Sbjct: 441  GRAGKLDEAHELVEYMPINPDLTTWAALYRACKAHKS-NRTDIVLQNLLELDPELRGSYI 499

Query: 156  FLSNVYAGLGRWEDVEDLRTSMKRKGVGKDPGWSCIAVNEKMHSFVAGDQTH 1
            FL   +A  G+++DVE  R S+++K   +  G S I ++ +++ F A D TH
Sbjct: 500  FLDKTHAAKGKYQDVEKRRLSLQKKVKERSMGCSYIELDCQLNKFAADDYTH 551