BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013348
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...   213   6e-53
ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Me...   212   1e-52
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin...   212   1e-52
ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabi...   211   3e-52
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...   211   3e-52

>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  213 bits (542), Expect = 6e-53
 Identities = 107/128 (83%), Positives = 116/128 (90%)
 Frame = +3

Query: 285 MSGASPEDIFLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGEL 464
           MS A PEDI+LSTSLASYLDKKLLVLLRDGRKLMG LRSFDQFANAVLEGAC+RVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60

Query: 465 YCDIPLGLYVIRGENVVLIGELTPNEEELPPHMTRVSVDAIRQAQKVEMQASELKGTMRK 644
           YCDIPLGLY+IRGENVVLIGEL   +EELPPHMTRVS   IR+AQK E  A++LKGTMRK
Sbjct: 61  YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120

Query: 645 RMEFLDMD 668
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
           gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like
           protein LSm1 [Medicago truncatula]
          Length = 131

 Score =  212 bits (540), Expect = 1e-52
 Identities = 108/131 (82%), Positives = 118/131 (90%), Gaps = 3/131 (2%)
 Frame = +3

Query: 285 MSGASPEDIFLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGEL 464
           MS A+PED++LSTSLASYLDKKLL+LLRDGRKLMGTLRSFDQFANAVLEGAC+RVIVG+L
Sbjct: 1   MSWAAPEDLYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 465 YCDIPLGLYVIRGENVVLIGELTPNEEELPPHMTRVSVDAIR---QAQKVEMQASELKGT 635
           YCDIPLGLYVIRGENVVLIGE+    EELPPHMTRV  + IR   +AQKVE  ASELKGT
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEMDVEREELPPHMTRVPTEEIRRGIRAQKVERDASELKGT 120

Query: 636 MRKRMEFLDMD 668
           MRKRMEFLD+D
Sbjct: 121 MRKRMEFLDLD 131


>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
           gi|255628281|gb|ACU14485.1| unknown [Glycine max]
          Length = 128

 Score =  212 bits (540), Expect = 1e-52
 Identities = 108/128 (84%), Positives = 115/128 (89%)
 Frame = +3

Query: 285 MSGASPEDIFLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGEL 464
           MS A PEDI+LSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGAC+RVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 465 YCDIPLGLYVIRGENVVLIGELTPNEEELPPHMTRVSVDAIRQAQKVEMQASELKGTMRK 644
           YCDIPLGLYVIRGENVVLIGEL    EELP HMTRVS   I++AQK E +AS+LKGTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120

Query: 645 RMEFLDMD 668
           RMEFLD D
Sbjct: 121 RMEFLDFD 128


>ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
           gi|30682974|ref|NP_850580.1| U6 snRNA-associated Sm-like
           protein LSm1 [Arabidopsis thaliana]
           gi|21536995|gb|AAM61336.1| Sm protein, putative
           [Arabidopsis thaliana] gi|27754337|gb|AAO22620.1|
           putative Sm protein [Arabidopsis thaliana]
           gi|28393853|gb|AAO42334.1| putative Sm protein
           [Arabidopsis thaliana] gi|332641944|gb|AEE75465.1| U6
           snRNA-associated Sm-like protein LSm1 [Arabidopsis
           thaliana] gi|332641945|gb|AEE75466.1| U6
           snRNA-associated Sm-like protein LSm1 [Arabidopsis
           thaliana]
          Length = 128

 Score =  211 bits (536), Expect = 3e-52
 Identities = 107/128 (83%), Positives = 115/128 (89%)
 Frame = +3

Query: 285 MSGASPEDIFLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGEL 464
           MS A PE+I+LSTSLASYLD+KLLVLLRDGRKLMGTLRSFDQFANAVLEGAC+RVIVGE 
Sbjct: 1   MSWAGPEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60

Query: 465 YCDIPLGLYVIRGENVVLIGELTPNEEELPPHMTRVSVDAIRQAQKVEMQASELKGTMRK 644
           YCDIPLGLYVIRGENVVLIGEL    EELPPHM RVS   I++AQKVE +ASEL+GTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDTEREELPPHMIRVSEAEIKRAQKVEREASELRGTMRK 120

Query: 645 RMEFLDMD 668
           RMEFLD D
Sbjct: 121 RMEFLDFD 128


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  211 bits (536), Expect = 3e-52
 Identities = 106/128 (82%), Positives = 116/128 (90%)
 Frame = +3

Query: 285 MSGASPEDIFLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGEL 464
           MS A PEDI+LSTSLASYLDKKLLVLLRD RKL+G LRSFDQFANAVLEGAC+RVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 465 YCDIPLGLYVIRGENVVLIGELTPNEEELPPHMTRVSVDAIRQAQKVEMQASELKGTMRK 644
           YCDIPLGLYVIRGENVVLIGEL   +EELPPHMTRVS   I++AQK E +AS+LKGTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120

Query: 645 RMEFLDMD 668
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128