BLASTX nr result

ID: Lithospermum22_contig00013269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013269
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40756.1| unknown [Medicago truncatula]                          106   2e-21
gb|ACJ85988.1| unknown [Medicago truncatula]                          106   2e-21
ref|XP_002865230.1| predicted protein [Arabidopsis lyrata subsp....    99   3e-19
ref|NP_199380.1| FKBP-type peptidyl-prolyl cis-trans isomerase 3...    99   4e-19
emb|CAD35362.1| FK506 binding protein 1 [Arabidopsis thaliana]         99   4e-19

>gb|AFK40756.1| unknown [Medicago truncatula]
          Length = 207

 Score =  106 bits (264), Expect = 2e-21
 Identities = 65/144 (45%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
 Frame = -3

Query: 415 MSTSSPF----CLGTISPRKPAIVPSFSPTNNNEVQLSQPSEALSINPLNISSLPATCST 248
           MS+ +P+    CL ++ P+K   + S + T + +VQ   P      N L           
Sbjct: 1   MSSLAPYSVGTCLTSLQPQKLNHLNSLTTTCSVQVQQQPPVLVQKDNQLK---------- 50

Query: 247 LVNRREAIGFGL--GLCFLLMPQWCNVAHATETAPCQFTLTQSGLAYCDKAIGYGSQPSK 74
              RREAIG  L  GL   L+      A A E  PCQ T+  SGL+YCDK +GYG Q  K
Sbjct: 51  ---RREAIGLSLSFGLLHSLLQPIIPTATAAEAVPCQLTVAPSGLSYCDKVVGYGPQAVK 107

Query: 73  GQLIKAHYVGKLENGTVFDSSYNR 2
           GQLIKAHYVG+LENG VFDSSYNR
Sbjct: 108 GQLIKAHYVGRLENGKVFDSSYNR 131


>gb|ACJ85988.1| unknown [Medicago truncatula]
          Length = 155

 Score =  106 bits (264), Expect = 2e-21
 Identities = 65/144 (45%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
 Frame = -3

Query: 415 MSTSSPF----CLGTISPRKPAIVPSFSPTNNNEVQLSQPSEALSINPLNISSLPATCST 248
           MS+ +P+    CL ++ P+K   + S + T + +VQ   P      N L           
Sbjct: 1   MSSLAPYSVGTCLTSLQPQKLNHLNSLTTTCSVQVQQQPPVLVQKDNQLK---------- 50

Query: 247 LVNRREAIGFGL--GLCFLLMPQWCNVAHATETAPCQFTLTQSGLAYCDKAIGYGSQPSK 74
              RREAIG  L  GL   L+      A A E  PCQ T+  SGL+YCDK +GYG Q  K
Sbjct: 51  ---RREAIGLSLSFGLLHSLLQPIIPTATAAEAVPCQLTVAPSGLSYCDKVVGYGPQAVK 107

Query: 73  GQLIKAHYVGKLENGTVFDSSYNR 2
           GQLIKAHYVG+LENG VFDSSYNR
Sbjct: 108 GQLIKAHYVGRLENGKVFDSSYNR 131


>ref|XP_002865230.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311065|gb|EFH41489.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 64/141 (45%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
 Frame = -3

Query: 409 TSSPFCLGTISP----RKPAIVPSFSPTNNNEVQLSQPSEALSINPLNISSLPATCSTLV 242
           +S  F +GT SP    RK   + + S      + L    +A S   L+   L ++C    
Sbjct: 2   SSLGFSVGTCSPPSEQRKCRFLVNNSLNKAETINLRNTQKASSDPELSFVQL-SSCG--- 57

Query: 241 NRREAI-GFGLGLCFLLMPQWCNVAHATETAPCQFTLTQSGLAYCDKAIGYGSQPSKGQL 65
            RREAI GFG  +  L      NV+   ET  C+F+++ SGLA+CDK +GYG +  KGQL
Sbjct: 58  -RREAIIGFGFSIGLL-----DNVSALAETTSCEFSVSPSGLAFCDKVVGYGPEAVKGQL 111

Query: 64  IKAHYVGKLENGTVFDSSYNR 2
           IKAHYVGKLENG VFDSSYNR
Sbjct: 112 IKAHYVGKLENGKVFDSSYNR 132


>ref|NP_199380.1| FKBP-type peptidyl-prolyl cis-trans isomerase 3 [Arabidopsis
           thaliana] gi|21542069|sp|Q9SCY2.2|FKB13_ARATH RecName:
           Full=Peptidyl-prolyl cis-trans isomerase FKBP13,
           chloroplastic; Short=PPIase FKBP13; AltName:
           Full=FK506-binding protein 1; AltName:
           Full=FK506-binding protein 13; Short=AtFKBP13; AltName:
           Full=Immunophilin FKBP13; AltName: Full=Rotamase; Flags:
           Precursor gi|9758671|dbj|BAB09210.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|18086457|gb|AAL57682.1| AT5g45680/MRA19_7
           [Arabidopsis thaliana] gi|20147125|gb|AAM10279.1|
           AT5g45680/MRA19_7 [Arabidopsis thaliana]
           gi|332007900|gb|AED95283.1| FKBP-type peptidyl-prolyl
           cis-trans isomerase 3 [Arabidopsis thaliana]
          Length = 208

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 63/141 (44%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
 Frame = -3

Query: 409 TSSPFCLGTISP----RKPAIVPSFSPTNNNEVQLSQPSEALSINPLNISSLPATCSTLV 242
           +S  F +GT SP    RK   + + S      + L    +  S   L+ + L ++C    
Sbjct: 2   SSLGFSVGTCSPPSEKRKCRFLVNNSLNKAEAINLRNKQKVSSDPELSFAQL-SSCG--- 57

Query: 241 NRREAI-GFGLGLCFLLMPQWCNVAHATETAPCQFTLTQSGLAYCDKAIGYGSQPSKGQL 65
            RREAI GFG  +  L      NV+   ET  C+F+++ SGLA+CDK +GYG +  KGQL
Sbjct: 58  -RREAIIGFGFSIGLL-----DNVSALAETTSCEFSVSPSGLAFCDKVVGYGPEAVKGQL 111

Query: 64  IKAHYVGKLENGTVFDSSYNR 2
           IKAHYVGKLENG VFDSSYNR
Sbjct: 112 IKAHYVGKLENGKVFDSSYNR 132


>emb|CAD35362.1| FK506 binding protein 1 [Arabidopsis thaliana]
          Length = 208

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 63/141 (44%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
 Frame = -3

Query: 409 TSSPFCLGTISP----RKPAIVPSFSPTNNNEVQLSQPSEALSINPLNISSLPATCSTLV 242
           +S  F +GT SP    RK   + + S      + L    +  S   L+ + L ++C    
Sbjct: 2   SSLGFTVGTCSPPSEKRKCRFLVNNSLNKAEAINLRNKQKVSSDPELSFAQL-SSCG--- 57

Query: 241 NRREAI-GFGLGLCFLLMPQWCNVAHATETAPCQFTLTQSGLAYCDKAIGYGSQPSKGQL 65
            RREAI GFG  +  L      NV+   ET  C+F+++ SGLA+CDK +GYG +  KGQL
Sbjct: 58  -RREAIIGFGFSIGLL-----DNVSALAETTSCEFSVSPSGLAFCDKVVGYGPEAVKGQL 111

Query: 64  IKAHYVGKLENGTVFDSSYNR 2
           IKAHYVGKLENG VFDSSYNR
Sbjct: 112 IKAHYVGKLENGKVFDSSYNR 132


Top