BLASTX nr result
ID: Lithospermum22_contig00013260
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00013260
(1635 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu... 573 e-161
ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-l... 540 e-151
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i... 540 e-151
ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-l... 536 e-150
ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i... 532 e-149
>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
gi|223540085|gb|EEF41662.1| RNA binding protein, putative
[Ricinus communis]
Length = 436
Score = 573 bits (1477), Expect = e-161
Identities = 292/425 (68%), Positives = 340/425 (80%), Gaps = 18/425 (4%)
Frame = -3
Query: 1432 AEEESVKLFVGQVPKKMTEAQLVEMFKEIAIVNEVNIIKDKTTKASRGCCFVICPSREEA 1253
+ EESVKLFVGQVPK MTE QL+ MFKE A+V+EVNIIKDKTT+ASRGCCFVICPSR+EA
Sbjct: 10 SSEESVKLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
Query: 1252 DKAVDACHNKKTLPGASCPLQVKYADGELERLEHKLFVGMLPKNASESEVSQLFSQYGTI 1073
DKAV+ACHNKKTLPGAS PLQVKYADGELERLEHKLFVGMLPKN SE+EVS+LFS YGTI
Sbjct: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSELFSTYGTI 129
Query: 1072 TDLQILKGSQQTSKGCAFLKFETKEQAVAAIEALSGKHKMEGSTAPLVVKWADTEKERQA 893
DLQIL+GSQQTSKGCAFLK+ETKEQA+AA+EA++GKHKMEGS+ PLVVKWADTEKERQA
Sbjct: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
Query: 892 RRFQKAHSQESNVPNADAQPPSLFRALXXXXXXXXXXXXYQI----------------QS 761
RR QK SQ SN+PNAD+Q PSLF AL YQ Q
Sbjct: 190 RRAQKVQSQASNLPNADSQHPSLFGALPMGYVPQYNGYGYQAPGTYGLMPYRLPPLQSQP 249
Query: 760 AFHNPISPVNQRNAMR-GVQPNISPGIGLRNYQMTPGAYMRSAYQAIPTVPYPVPYSVGI 584
AFH+ I PVNQ NA+R GV+P++ P +G RNY + P +Y+ SAY A+P + YP+ Y G+
Sbjct: 250 AFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALPPASYVGSAYPAVPGIQYPMAYPGGM 309
Query: 583 ISKRPLHWSPGSV-PHLSADTPVASSSINKSSGGHLEGPPGANLFIYDIPQEFRDQELAD 407
+S RPL SPG+V P + + SS ++ SSGG LEGPPG+NLFIY IPQEF DQELA
Sbjct: 310 MSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGPPGSNLFIYHIPQEFGDQELAS 369
Query: 406 AFKPYGRIVSAKVYVDRATGVSKCFGFVSYDSREAAETAINMMNGCQLGGKKLKVEHKRE 227
AF+PYG+++SAKV+VD+ATGVSKCFGFVSYDS AA+TAINMMNGCQLGGKKLKV+ KR+
Sbjct: 370 AFQPYGKVLSAKVFVDKATGVSKCFGFVSYDSPTAAQTAINMMNGCQLGGKKLKVQLKRD 429
Query: 226 DNQKK 212
+ Q K
Sbjct: 430 NKQSK 434
>ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
Length = 431
Score = 540 bits (1392), Expect = e-151
Identities = 278/424 (65%), Positives = 331/424 (78%), Gaps = 17/424 (4%)
Frame = -3
Query: 1432 AEEESVKLFVGQVPKKMTEAQLVEMFKEIAIVNEVNIIKDKTTKASRGCCFVICPSREEA 1253
+ EESVKLFVGQVPK MTE +L+ MFKE A+V+EVNIIKDK T+ASRGCCFVICPSREEA
Sbjct: 10 SSEESVKLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEA 69
Query: 1252 DKAVDACHNKKTLPGASCPLQVKYADGELERLEHKLFVGMLPKNASESEVSQLFSQYGTI 1073
DKAV+ACHNK+TLPGAS PLQVKYADGELERLEHKLF+GMLPKN SE E+S LFS+YGTI
Sbjct: 70 DKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEISALFSKYGTI 129
Query: 1072 TDLQILKGSQQTSKGCAFLKFETKEQAVAAIEALSGKHKMEGSTAPLVVKWADTEKERQA 893
DLQIL+GSQQTSKGCAFLK+ETKEQA+ A+EA++GKHKMEGS+ PLVVKWADTEKERQA
Sbjct: 130 KDLQILRGSQQTSKGCAFLKYETKEQALTALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
Query: 892 RRFQKAHSQESNVPNADAQPPSLFRALXXXXXXXXXXXXYQI----------------QS 761
RR QKA SQ SNVP+ D+Q PSLF AL YQ Q
Sbjct: 190 RRAQKAQSQASNVPHTDSQHPSLFGALPMSYVPPYNGYGYQAPVGYGLMPYRMPPMQSQH 249
Query: 760 AFHNPISPVNQRNAMRGVQPNISPGIGLRNYQMTPGAYMRSAYQAIPTVPYPVPYSVGII 581
+HN + +NQ NA+R P++ P + RNY + P +Y+ S Y A+P + +P+ Y G+I
Sbjct: 250 GYHNMMPHMNQGNALR---PDLGPNMNPRNYHVPPASYVGS-YPAVPGLQHPMAYPTGMI 305
Query: 580 SKRPLHWSPGSV-PHLSADTPVASSSINKSSGGHLEGPPGANLFIYDIPQEFRDQELADA 404
S RP++ SPGSV P + ASS +K+SGG EGPPGANLFIY IPQEF DQELA A
Sbjct: 306 SPRPMNTSPGSVSPASGNNNHAASSGASKNSGGQAEGPPGANLFIYHIPQEFGDQELATA 365
Query: 403 FKPYGRIVSAKVYVDRATGVSKCFGFVSYDSREAAETAINMMNGCQLGGKKLKVEHKRED 224
F+P+GR++SAKV+VD+ATGVSKCFGFVSYD+ EAA++AI+MMNGCQLGGKKLKV+ KR++
Sbjct: 366 FQPFGRVLSAKVFVDKATGVSKCFGFVSYDTPEAAQSAISMMNGCQLGGKKLKVQLKRDN 425
Query: 223 NQKK 212
Q K
Sbjct: 426 KQGK 429
>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis vinifera]
gi|296086641|emb|CBI32276.3| unnamed protein product
[Vitis vinifera]
Length = 437
Score = 540 bits (1392), Expect = e-151
Identities = 279/425 (65%), Positives = 336/425 (79%), Gaps = 19/425 (4%)
Frame = -3
Query: 1432 AEEESVKLFVGQVPKKMTEAQLVEMFKEIAIVNEVNIIKDKTTKASRGCCFVICPSREEA 1253
A E+SVKLFVGQVPK MTEAQL+ MFKE A+V+EVNIIKDK T+ASRGCCFVICPSR+EA
Sbjct: 10 ASEDSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEA 69
Query: 1252 DKAVDACHNKKTLPGASCPLQVKYADGELERLEHKLFVGMLPKNASESEVSQLFSQYGTI 1073
DKAV+ACHNK+TLPGAS PLQVKYADGELERLEHKLFVGMLPKN SE+EVS LFS+YGTI
Sbjct: 70 DKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSSLFSKYGTI 129
Query: 1072 TDLQILKGSQQTSKGCAFLKFETKEQAVAAIEALSGKHKMEGSTAPLVVKWADTEKERQA 893
DLQIL+GSQQTSKGCAFLK+ETKEQA+AA+EA++GKHKMEGS+ PLVVKWADTEKERQA
Sbjct: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
Query: 892 RRFQKAHSQESNVPNADA-QPPSLFRALXXXXXXXXXXXXYQI----------------Q 764
R+ QKA SQ SN+P+AD+ Q PSLF AL YQ Q
Sbjct: 190 RKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRMPPMQSQ 249
Query: 763 SAFHNPISPVNQRNAMRGVQPNISPGIGLRNYQMTPGAYMRSAYQAIPTVPYPVPYSVGI 584
+AFHN I VNQ +AMR + P+++ + RNY + +YM SAY A+P + YP+ Y GI
Sbjct: 250 AAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYPMAYHGGI 309
Query: 583 ISKRPLHWSPGSVP--HLSADTPVASSSINKSSGGHLEGPPGANLFIYDIPQEFRDQELA 410
+S +PL SPGS P +++++P +S SSGG +EGPPGANLFIY IPQEF D ELA
Sbjct: 310 MSHQPLSGSPGSRPPAMMTSNSP-TNSGAGASSGGQVEGPPGANLFIYHIPQEFGDHELA 368
Query: 409 DAFKPYGRIVSAKVYVDRATGVSKCFGFVSYDSREAAETAINMMNGCQLGGKKLKVEHKR 230
AF+ +GR++SAKV+VD+ATG SKCFGFVSYDS +A++AI+MMNGCQLGGKKLKV+ KR
Sbjct: 369 HAFQQFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQSAISMMNGCQLGGKKLKVQLKR 428
Query: 229 EDNQK 215
++N++
Sbjct: 429 DNNKQ 433
>ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-like [Glycine max]
Length = 429
Score = 536 bits (1381), Expect = e-150
Identities = 276/424 (65%), Positives = 333/424 (78%), Gaps = 17/424 (4%)
Frame = -3
Query: 1432 AEEESVKLFVGQVPKKMTEAQLVEMFKEIAIVNEVNIIKDKTTKASRGCCFVICPSREEA 1253
+ EESVKLFVGQVPK MTE +L+ MFKE A+V+EVNIIKDK T+ASRGCCF+ICPSREEA
Sbjct: 8 SSEESVKLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFLICPSREEA 67
Query: 1252 DKAVDACHNKKTLPGASCPLQVKYADGELERLEHKLFVGMLPKNASESEVSQLFSQYGTI 1073
DKAV+ACHNKKTLPGAS PLQVKYADGELERLEHKLF+GMLPKN SE E+S LFS+YGTI
Sbjct: 68 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEISALFSKYGTI 127
Query: 1072 TDLQILKGSQQTSKGCAFLKFETKEQAVAAIEALSGKHKMEGSTAPLVVKWADTEKERQA 893
DLQIL+GSQQTSKGCAFLK+ETKEQA+AA+EA++GKHKME S+ PLVVKWADTEKERQA
Sbjct: 128 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEDSSVPLVVKWADTEKERQA 187
Query: 892 RRFQKAHSQESNVPNADAQPPSLFRALXXXXXXXXXXXXYQI----------------QS 761
RR QKA SQ SNVP+ D+Q S+F AL YQ Q
Sbjct: 188 RRAQKAQSQASNVPHTDSQHLSMFGALPMSYVPPYNGYAYQAPGGYGLMPYRMPPMQSQH 247
Query: 760 AFHNPISPVNQRNAMRGVQPNISPGIGLRNYQMTPGAYMRSAYQAIPTVPYPVPYSVGII 581
+HN + +NQ NA+R P++ P + RNY + P +Y+ S+Y A+P + +P+ Y G+I
Sbjct: 248 GYHNVMPHMNQVNALR---PDLGPNMNPRNYHVPPASYV-SSYPAVPGLQHPMAYPTGMI 303
Query: 580 SKRPLHWSPGSV-PHLSADTPVASSSINKSSGGHLEGPPGANLFIYDIPQEFRDQELADA 404
S RP++ SPGSV P ++ ASS +K+SGG +EGPPGANLFIY IPQEF DQELA A
Sbjct: 304 SPRPMNTSPGSVSPAGGNNSSAASSGASKNSGGQVEGPPGANLFIYHIPQEFGDQELATA 363
Query: 403 FKPYGRIVSAKVYVDRATGVSKCFGFVSYDSREAAETAINMMNGCQLGGKKLKVEHKRED 224
F+P+GR++SAKV+VD+ATGVSKCFGFVSYD+ EAA++AI+MMNGCQLGGKKLKV+ KR++
Sbjct: 364 FQPFGRVLSAKVFVDKATGVSKCFGFVSYDTPEAAQSAISMMNGCQLGGKKLKVQLKRDN 423
Query: 223 NQKK 212
Q K
Sbjct: 424 KQGK 427
>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis vinifera]
Length = 447
Score = 532 bits (1371), Expect = e-149
Identities = 279/435 (64%), Positives = 336/435 (77%), Gaps = 29/435 (6%)
Frame = -3
Query: 1432 AEEESVKLFVGQVPKKMTEAQLVEMFKEIAIVNEVNIIKDKTTKASRGCCFVICPSREEA 1253
A E+SVKLFVGQVPK MTEAQL+ MFKE A+V+EVNIIKDK T+ASRGCCFVICPSR+EA
Sbjct: 10 ASEDSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEA 69
Query: 1252 DKAVDACHNKKTLPGASCPLQVKYADGELERL----------EHKLFVGMLPKNASESEV 1103
DKAV+ACHNK+TLPGAS PLQVKYADGELERL EHKLFVGMLPKN SE+EV
Sbjct: 70 DKAVNACHNKRTLPGASSPLQVKYADGELERLGVIFCHPCYPEHKLFVGMLPKNVSEAEV 129
Query: 1102 SQLFSQYGTITDLQILKGSQQTSKGCAFLKFETKEQAVAAIEALSGKHKMEGSTAPLVVK 923
S LFS+YGTI DLQIL+GSQQTSKGCAFLK+ETKEQA+AA+EA++GKHKMEGS+ PLVVK
Sbjct: 130 SSLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 189
Query: 922 WADTEKERQARRFQKAHSQESNVPNADA-QPPSLFRALXXXXXXXXXXXXYQI------- 767
WADTEKERQAR+ QKA SQ SN+P+AD+ Q PSLF AL YQ
Sbjct: 190 WADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLM 249
Query: 766 ---------QSAFHNPISPVNQRNAMRGVQPNISPGIGLRNYQMTPGAYMRSAYQAIPTV 614
Q+AFHN I VNQ +AMR + P+++ + RNY + +YM SAY A+P +
Sbjct: 250 QYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGL 309
Query: 613 PYPVPYSVGIISKRPLHWSPGSVP--HLSADTPVASSSINKSSGGHLEGPPGANLFIYDI 440
YP+ Y GI+S +PL SPGS P +++++P +S SSGG +EGPPGANLFIY I
Sbjct: 310 QYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSP-TNSGAGASSGGQVEGPPGANLFIYHI 368
Query: 439 PQEFRDQELADAFKPYGRIVSAKVYVDRATGVSKCFGFVSYDSREAAETAINMMNGCQLG 260
PQEF D ELA AF+ +GR++SAKV+VD+ATG SKCFGFVSYDS +A++AI+MMNGCQLG
Sbjct: 369 PQEFGDHELAHAFQQFGRVLSAKVFVDKATGASKCFGFVSYDSPASAQSAISMMNGCQLG 428
Query: 259 GKKLKVEHKREDNQK 215
GKKLKV+ KR++N++
Sbjct: 429 GKKLKVQLKRDNNKQ 443