BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013214
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531104.1| DNA repair and recombination protein radB, p...   305   1e-80
emb|CBI16200.3| unnamed protein product [Vitis vinifera]              302   1e-79
ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog ...   297   2e-78
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]   294   3e-77
ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog ...   282   8e-74

>ref|XP_002531104.1| DNA repair and recombination protein radB, putative [Ricinus
           communis] gi|223529300|gb|EEF31269.1| DNA repair and
           recombination protein radB, putative [Ricinus communis]
          Length = 315

 Score =  305 bits (780), Expect = 1e-80
 Identities = 154/259 (59%), Positives = 195/259 (75%), Gaps = 4/259 (1%)
 Frame = +2

Query: 2   GITQILDVMNNQ-HQPWLNGQELLENALLNKQSLSVGCDRINALLQGGLRKGRLTELVGP 178
           GI QIL +++ Q HQPWLNG +LL++AL NK  LS G D I++LL GG+R+G+LTELVG 
Sbjct: 57  GINQILSIIDKQQHQPWLNGFQLLKDALQNKHVLSTGFDGIDSLLGGGVREGQLTELVGS 116

Query: 179 SSSGKTQICFQAASYAATHGIANVMFIDTGNSFSPKRIAQFVNKMSNHVIDQESLRRIMN 358
           SSSGKTQ+C Q A+  A   +  V+F+DTGNSFSP+RI QFV ++S   ++Q     +M+
Sbjct: 117 SSSGKTQVCLQVAANVAKQHMGRVIFVDTGNSFSPRRIEQFVGRISGSALNQT----VMS 172

Query: 359 KIVCHSVYDILSLLDILHQLEINLK---HQNDFQVMMLIVDSLSSLITPVLGADGAHGHA 529
            I+CHSV+DI S+ D+LHQLEI+L+   H  DF+V  LIVDS+SSLITP+LG  G+ GHA
Sbjct: 173 NILCHSVFDIFSMFDVLHQLEISLRSQGHSGDFKVQSLIVDSISSLITPILGGGGSQGHA 232

Query: 530 LLVQVGFMLKKIAYEHNIAVLVTNHMVASEGGSLKPALGERWKSIPHVRLHLSRDSSNNT 709
           L+   G +LKK+A+EHNIAVLVTNHMVA EGG+ KPALGE WKSIPHVRL LSRD   N 
Sbjct: 233 LMTSAGILLKKLAHEHNIAVLVTNHMVAGEGGNFKPALGESWKSIPHVRLLLSRDQGKNV 292

Query: 710 SWMSILGHPSVATGVAVEF 766
             ++IL HPS A+G A  F
Sbjct: 293 CNVTILKHPSQASGKAARF 311


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score =  302 bits (773), Expect = 1e-79
 Identities = 151/250 (60%), Positives = 192/250 (76%), Gaps = 6/250 (2%)
 Frame = +2

Query: 2   GITQILDVMNNQHQPWLNGQELLENALLNKQSLSVGCDRINALLQGGLRKGRLTELVGPS 181
           GITQIL +++ QHQPWLNG ELLE+A  NKQ LS GC+ I+ LL GGL  G LTELVGPS
Sbjct: 109 GITQILSIIDGQHQPWLNGMELLEDAQQNKQVLSTGCEGIDMLLHGGLCVGHLTELVGPS 168

Query: 182 SSGKTQICFQAASYAATHGIANVMFIDTGNSFSPKRIAQFVNKMSNHV---IDQESLRRI 352
           S+GKTQIC + AS  AT  +  V+FIDTGNSFSP RIA F+N++ + +   + Q  L ++
Sbjct: 169 SAGKTQICLKVASGVATRYMGGVVFIDTGNSFSPLRIAHFINQIPDTIFKEVKQNILEKV 228

Query: 353 MNKIVCHSVYDILSLLDILHQLEINLKHQ---NDFQVMMLIVDSLSSLITPVLGADGAHG 523
           M++I+CHSV+DI ++LD++HQLE +L+ Q      QV +LIVDS+SSLITP+LG  G+HG
Sbjct: 229 MSQILCHSVFDIFAMLDVVHQLEYSLRSQVQTGADQVRLLIVDSISSLITPILGGSGSHG 288

Query: 524 HALLVQVGFMLKKIAYEHNIAVLVTNHMVASEGGSLKPALGERWKSIPHVRLHLSRDSSN 703
            AL++  GF+LKK+A+EHN+AV+VTNHMV  EGG LKPALGE WKSIPHVRL LSRD  +
Sbjct: 289 RALMISAGFLLKKLAHEHNLAVVVTNHMVGGEGGILKPALGESWKSIPHVRLLLSRDPGS 348

Query: 704 NTSWMSILGH 733
           +   MSIL H
Sbjct: 349 SICHMSILKH 358


>ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog 4-like [Vitis vinifera]
          Length = 326

 Score =  297 bits (761), Expect = 2e-78
 Identities = 150/247 (60%), Positives = 189/247 (76%), Gaps = 3/247 (1%)
 Frame = +2

Query: 2   GITQILDVMNNQHQPWLNGQELLENALLNKQSLSVGCDRINALLQGGLRKGRLTELVGPS 181
           GITQIL +++ QHQPWLNG ELLE+A  NKQ LS GC+ I+ LL GGL  G LTELVGPS
Sbjct: 57  GITQILSIIDGQHQPWLNGMELLEDAQQNKQVLSTGCEGIDMLLHGGLCVGHLTELVGPS 116

Query: 182 SSGKTQICFQAASYAATHGIANVMFIDTGNSFSPKRIAQFVNKMSNHVIDQESLRRIMNK 361
           S+GKTQIC + AS  AT  +  V+FIDTGNSFSP RIA F+N++ + +  +     IM++
Sbjct: 117 SAGKTQICLKVASGVATRYMGGVVFIDTGNSFSPLRIAHFINQIPDTIFKEV----IMSQ 172

Query: 362 IVCHSVYDILSLLDILHQLEINLKHQ---NDFQVMMLIVDSLSSLITPVLGADGAHGHAL 532
           I+CHSV+DI ++LD++HQLE +L+ Q      QV +LIVDS+SSLITP+LG  G+HG AL
Sbjct: 173 ILCHSVFDIFAMLDVVHQLEYSLRSQVQTGADQVRLLIVDSISSLITPILGGSGSHGRAL 232

Query: 533 LVQVGFMLKKIAYEHNIAVLVTNHMVASEGGSLKPALGERWKSIPHVRLHLSRDSSNNTS 712
           ++  GF+LKK+A+EHN+AV+VTNHMV  EGG LKPALGE WKSIPHVRL LSRD  ++  
Sbjct: 233 MISAGFLLKKLAHEHNLAVVVTNHMVGGEGGILKPALGESWKSIPHVRLLLSRDPGSSIC 292

Query: 713 WMSILGH 733
            MSIL H
Sbjct: 293 HMSILKH 299


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score =  294 bits (752), Expect = 3e-77
 Identities = 154/278 (55%), Positives = 197/278 (70%), Gaps = 25/278 (8%)
 Frame = +2

Query: 2   GITQILDVMNNQHQPWLNGQELLENALLNKQSLSVGCDRINALLQGGLRKGRLTELVGPS 181
           GITQIL +++ QHQPWLNG ELLE+A  NKQ LS GC+ I+ LLQGGL  G LTELVGPS
Sbjct: 57  GITQILSIIDGQHQPWLNGMELLEDAQQNKQVLSTGCEGIDMLLQGGLCVGHLTELVGPS 116

Query: 182 SSGKTQICFQAASYAATHGIANVMFIDTGNSFSPKRIAQFVNKMSNHV---IDQESLRRI 352
           SSGKTQIC + AS  AT  +  V+FIDTGNSFSP RIA F+N++ + +   + Q  L ++
Sbjct: 117 SSGKTQICLKVASGVATRYMGGVVFIDTGNSFSPLRIAHFINQIPDTIFKEVKQNILEKV 176

Query: 353 MNKIVCHSVYDILSLLDILHQLEINLKHQ---NDFQVMMLIVDSLSSLITPVLGADGAHG 523
           M++I+CHSV+DI ++LD++HQLE +L+ Q      QV +LIVDS+SSLITP+LG  G+HG
Sbjct: 177 MSQILCHSVFDIFAMLDVVHQLEYSLRSQVQTGADQVRLLIVDSISSLITPILGGSGSHG 236

Query: 524 HALLVQVGFMLKKIAYEHNIAVL-------------------VTNHMVASEGGSLKPALG 646
            AL++  GF+LKK+A+EHN+AV+                   VTNHMV  EGG LKPALG
Sbjct: 237 RALMISAGFLLKKLAHEHNLAVVPIIKVSILTIITIMIHWLKVTNHMVGGEGGILKPALG 296

Query: 647 ERWKSIPHVRLHLSRDSSNNTSWMSILGHPSVATGVAV 760
           E WKSIPHVRL LSRD  ++   MSIL H  ++   A+
Sbjct: 297 ESWKSIPHVRLLLSRDPGSSICHMSILKHSYMSRTKAI 334


>ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Cucumis
           sativus] gi|449518921|ref|XP_004166484.1| PREDICTED: DNA
           repair protein RAD51 homolog 4-like [Cucumis sativus]
          Length = 314

 Score =  282 bits (722), Expect = 8e-74
 Identities = 144/259 (55%), Positives = 190/259 (73%), Gaps = 4/259 (1%)
 Frame = +2

Query: 2   GITQILDVMN-NQHQPWLNGQELLENALLNKQSLSVGCDRINALLQGGLRKGRLTELVGP 178
           GITQIL +++  + QPW+NG ELLE+A  NK  LS+G + ++ LL GGLR+G+LTE+VGP
Sbjct: 57  GITQILSIIDATERQPWVNGLELLEDARENKNILSIGFEGVDVLLGGGLREGQLTEIVGP 116

Query: 179 SSSGKTQICFQAASYAATHGIANVMFIDTGNSFSPKRIAQFVNKMSNHVIDQESLRRIMN 358
           SSSGKTQ+C +AAS  A +  A V ++DTGNSFSP+RI+ FV        +Q  L+R+M 
Sbjct: 117 SSSGKTQVCLRAASNVAKNYKAEVFYMDTGNSFSPQRISGFVCTS-----EQSMLQRVMT 171

Query: 359 KIVCHSVYDILSLLDILHQLEINLKHQN---DFQVMMLIVDSLSSLITPVLGADGAHGHA 529
            I CHSV++I +L D+LHQLE NL+ Q    D +V +LI+DS+SSLITP+LG   + GHA
Sbjct: 172 SISCHSVFNIFALFDVLHQLEFNLRSQTCKGDRRVQLLIIDSISSLITPILGGSSSQGHA 231

Query: 530 LLVQVGFMLKKIAYEHNIAVLVTNHMVASEGGSLKPALGERWKSIPHVRLHLSRDSSNNT 709
           L++  G +LKKIA+EHNIAVLVTNH V  + G+ KPALGE WKS+PHVRL LSRD+ +N 
Sbjct: 232 LMISAGTLLKKIAHEHNIAVLVTNHTVGGDRGTSKPALGESWKSVPHVRLQLSRDAGSNV 291

Query: 710 SWMSILGHPSVATGVAVEF 766
              SIL H S+A+G+   F
Sbjct: 292 CQASILKHSSMASGMTARF 310