BLASTX nr result

ID: Lithospermum22_contig00013184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013184
         (1412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534512.1| conserved hypothetical protein [Ricinus comm...    83   2e-13
emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]    75   3e-11
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-10
ref|XP_003623084.1| F-box protein [Medicago truncatula] gi|35549...    67   9e-09
emb|CAN60955.1| hypothetical protein VITISV_008877 [Vitis vinifera]    67   9e-09

>ref|XP_002534512.1| conserved hypothetical protein [Ricinus communis]
           gi|223525141|gb|EEF27869.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 383

 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 84/306 (27%), Positives = 138/306 (45%), Gaps = 24/306 (7%)
 Frame = +1

Query: 115 KKRETSITILPEEIIFNILICLPAHVLYNVMRYVCRQWRRIIEDPQFVNTHF---LLATT 285
           K   ++I  LP EI+ +IL  +    L+ ++++VC+ WR + +DP  V+ HF   +    
Sbjct: 5   KATNSTIDSLPREIMADILSRVTTPSLF-IIKFVCQSWRNLAQDPLLVDLHFSHKIENNP 63

Query: 286 TLLMHS--PKRSRYYLLDLRECHARLSGFEFNIPSKYKYQ---IYTCNGLMLIFRGLVTN 450
            L++HS  P +++ Y L L   +    G    IP   K +   + +C G + ++  L  N
Sbjct: 64  CLILHSDHPTKNQLYALCLYPHNTSQDGMVMKIPVPVKLEFDVVGSCKGWLCLYDSLHKN 123

Query: 451 STYYVGNPITRRALALPRLSF-RVVCCALAF-----EASSEVYKVVVVYRTEKGCSMPYN 612
            T+Y+ NP T   + LP  +F   V   L F         +V KV  + RT       Y 
Sbjct: 124 -TFYMYNPFTNSCMELPISNFPSDVWTVLGFGFDPVRKKYKVLKVSYIRRTNNTAGERYG 182

Query: 613 LDL--GCAILTVGIDNAWRFLN----YALTKEDMTLLDTRPPITSTYFVYWAHPF--NHY 768
           L L     ILTVG   +WR L     Y +       ++ R      ++V W   +     
Sbjct: 183 LSLRSEVQILTVG-SPSWRSLGETPYYPIHSPSQVYVNGR-----LHWVNWPVRYRPGRK 236

Query: 769 ILALDLKSESIKRISPPLSFRCTQYINILNYLAKGNSISVWYVSRNF-SMEVWLLKDY-T 942
           +++ DL+ E  + +  P S        +L  +    S +V+   RN+ S EVW++KDY  
Sbjct: 237 LISFDLEDEKFREVPLPGSDGIKWGDYMLVVIRDCLSAAVY---RNYGSFEVWVMKDYGL 293

Query: 943 SEEWVK 960
            E W+K
Sbjct: 294 KESWIK 299


>emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]
          Length = 862

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 89/324 (27%), Positives = 146/324 (45%), Gaps = 41/324 (12%)
 Frame = +1

Query: 106  PQVKKRETSITILPEEIIFNILICLPAHVLYNVMRYVCRQWRRIIEDPQFVNTHFLLATT 285
            P++K+   SI   P+E++F IL  +P   L    R VC++WR +I DP F+  H   + T
Sbjct: 472  PRMKENPVSI---PDELVFEILTYIPVKSLLQC-RGVCKRWRSMISDPSFIEAHRSRSAT 527

Query: 286  TLLM-----HSPKRSRYYLLDLRECHAR-LSGFEFNIPSKYKYQIYTCNGLMLIF----R 435
            TLL+     H P+R +++L  +R+  AR LSG      S++     + NGL+ ++    R
Sbjct: 528  TLLISFPDTHRPRR-KHHLFSIRDGEARQLSG------SRHWNTSQSVNGLICLYEQHDR 580

Query: 436  GLVTNS-TYYVGNPITRRALALP--RLSFRVVC-----CALAFEASSEVYKVVVVYRTEK 591
                 S    + NP TR  + LP  R S   +C      +L F+ S++ YK++ V+    
Sbjct: 581  SFPKLSFRVTLCNPSTRERVTLPPTRFSNPDLCFDHQHISLGFDPSTKTYKILKVWFERF 640

Query: 592  GCSMPYNLDLGCAILTVGIDNAWRF----LNYALTKEDMTLLDTRPPITSTYFVYWA--- 750
               M       C ILT+G   AWR     L Y L  + + L  T         +YWA   
Sbjct: 641  NSIM-------CEILTLG-XRAWRIIKDGLEYTLEAKGICLNGT---------IYWADAR 683

Query: 751  ---HPFNHY------ILALDLKSESIKRI----SPPLSFRC-TQYINILNYLAKGNSISV 888
                 + H+      ++A D+  E  + +      P+  +C +  I I  ++A  +    
Sbjct: 684  HISEDYPHFVVMQNRVIAFDVGEEKFRSVPVPPEVPIWDKCMSSIIQIGGHMAIAD---Y 740

Query: 889  WYVSRNFS--MEVWLLKDYTSEEW 954
             +V+   S  M +W L+D  +  W
Sbjct: 741  QHVATGISTVMLIWKLEDSVNGIW 764


>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 71/318 (22%), Positives = 139/318 (43%), Gaps = 30/318 (9%)
 Frame = +1

Query: 109 QVKKRETSITILPEEIIFNILICLPAHVLYNVMRYVCRQWRRIIEDPQFVNTHFLLATTT 288
           QV+  E S++ LP++I  +IL+ LP        R VCR WR ++ D  F       A + 
Sbjct: 17  QVQDAEWSMSALPDDITADILLQLPLKSKIQC-RCVCRTWRNLLSDSYFSEVQRERAQSM 75

Query: 289 LLMHSPKR-----------SRYYLLDLRECHARLSGFEF----NIPSKYKYQIYTCNGLM 423
           L++ SP             + +Y++DL     R +  +     N+P+ +   + +CNGL+
Sbjct: 76  LVLRSPPSCVSRKAAALAPNDFYVVDLESGSVRNNVMKLNTKNNLPTCHVELVGSCNGLL 135

Query: 424 LIFRGLVTNSTYYVGNPITRRALALP-------RLSFRVVCCALAFEASSEVYKVVVVYR 582
            +F    +   +Y+ NP+T   +  P       +    ++   L F  S +    +V+  
Sbjct: 136 CLF-DKNSKKVFYLCNPVTGEHVRTPANCKKEKQRGKTILDAVLGFGFSPKSNHYMVLRI 194

Query: 583 TEKGCSMPYNLDLGCAILTVGIDNAWRFLNYALTKEDMTLLDTRP--PITSTYFVYWAHP 756
           T K  + P ++      + +  DN W+ +       ++   D +    ++    ++W   
Sbjct: 195 TRKKLTYPISILRSEGEICIFGDNEWKSIG------EIPFPDCKKFFGVSLNGALHWILN 248

Query: 757 FNHY-----ILALDLKSESIKRISPPLSFRCTQYINILNYLAKGNSISVWYVSRNFSMEV 921
            + Y     I ALD+ S+ I+ +SPP  FR       L  L   + + +      +++++
Sbjct: 249 LDDYEDADLICALDIDSKKIRPMSPPNGFRRDTTEMTLGVLR--DCLFICDSMTLYNLDI 306

Query: 922 WLLKDY-TSEEWVKILYI 972
           W++K+Y   + W K + I
Sbjct: 307 WVMKEYGVKDSWTKEIVI 324


>ref|XP_003623084.1| F-box protein [Medicago truncatula] gi|355498099|gb|AES79302.1|
           F-box protein [Medicago truncatula]
          Length = 369

 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 75/320 (23%), Positives = 128/320 (40%), Gaps = 23/320 (7%)
 Frame = +1

Query: 82  KVEPMPPQPQVKKRETSITILPEEIIFNILICLPAHVLYNVMRYVCRQWRRIIEDPQFVN 261
           K++P+P +         I ILP+E+I  +L  LP   L    +  C+ W  +  DP FV 
Sbjct: 13  KMQPLPLKCPPNSASGPI-ILPDELITELLSFLPVKSLIR-FKCCCKSWETLFSDPSFVK 70

Query: 262 -------THFLLATTTLLMHSPKRSRYYLLDLRECHARLSGFEFNIPSKYKYQIYTCNGL 420
                  +HFL + +  +  +     YY L  ++C                  + +CNGL
Sbjct: 71  FVLPIFLSHFLESPSKSITQTT--DPYYSLKEKDC---------------TMVVDSCNGL 113

Query: 421 MLIFRGLVTNSTYYVGNPITRRA------LALPRLSFRVVCCALAFEASSEVYKVVVVYR 582
           + +  G      + V NP TR          LP L+  ++     ++ S++ YKVV +  
Sbjct: 114 LCLV-GCSNEIWFRVWNPATRTISDKLGHADLPDLTQTLLKFTFGYDNSTDTYKVVALE- 171

Query: 583 TEKGCSMPYNLDLGCAILTVGIDNAWRFLNYAL---------TKEDMTLLDTRPPITSTY 735
                      D    + ++G DN WR +++ +             + LL  R  I   Y
Sbjct: 172 -----------DAAARVFSLG-DNVWRNIHFPVYFYLDDGVHLNGSVNLLAIRDYIRDYY 219

Query: 736 FVYWAHPFNHYILALDLKSESIKRISPPLSFRCTQYINILNYLAKGNSISVWYVSRNFSM 915
              +       I++LDL +E+ K  SPP  F    Y+    ++   + +    V +    
Sbjct: 220 DPRYITVEQVTIISLDLGTETYKEFSPPRGFDQKPYVKPSLFVLM-DCLCFSEVVKETHF 278

Query: 916 EVWLLKDYTSEE-WVKILYI 972
            +W + DY  EE W ++L I
Sbjct: 279 VIWKMTDYGVEESWTQLLKI 298


>emb|CAN60955.1| hypothetical protein VITISV_008877 [Vitis vinifera]
          Length = 289

 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 74/271 (27%), Positives = 111/271 (40%), Gaps = 33/271 (12%)
 Frame = +1

Query: 106 PQVKKRETSITILPEEIIFNILICLPAHVLYNVMRYVCRQWRRIIEDPQFVNTHFLLATT 285
           P  K    SI    +E++F IL  +P   L    R VC+ WR +I DP FV  H   + T
Sbjct: 12  PTEKNNTVSIA---DELVFEILTYIPVKSLLQ-FRSVCKSWRSMISDPSFVEAHQSRSAT 67

Query: 286 TLLMHSP----KRSRYYLLDLRECHAR-LSGFEFNIPSKYKYQIYTCNGLMLIFRGLVTN 450
           TLL+  P       R +L  + +  AR LSGF     S+      + NGL+ I+  LV +
Sbjct: 68  TLLISFPDTRRPSGRRHLFSISDGEARQLSGFSHWNNSQ------SVNGLICIYEQLVPS 121

Query: 451 S-----TYYVGNPITRRALALP-------RLSFRVVCCALAFEASSEVYKVVVVYRTEKG 594
           S        V NP T   + LP         SF     +L F+ S++ YK++  +    G
Sbjct: 122 SPKLSFRVIVCNPSTGERVTLPPTHFSKADFSFCHQNISLGFDPSTKTYKILRAWWGRYG 181

Query: 595 CSMPYNLDLGCAILTVGIDNAWRFL----NYALTKEDMTLLDTRPPITSTYFVYWAHPFN 762
             +     LG         +AWR +     YAL  + + L  T         +YWA  F+
Sbjct: 182 GPIHEIFTLG--------SHAWRIIKDDPEYALETKGICLNGT---------IYWAATFD 224

Query: 763 ------------HYILALDLKSESIKRISPP 819
                       + ++A D+  E  + +  P
Sbjct: 225 LSKDNSSFVVMKNRVIAFDVGEEKFRSVPVP 255


Top