BLASTX nr result

ID: Lithospermum22_contig00013178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013178
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327939.1| predicted protein [Populus trichocarpa] gi|2...    70   4e-10
ref|XP_002328901.1| predicted protein [Populus trichocarpa] gi|2...    69   9e-10
gb|AFW68176.1| hypothetical protein ZEAMMB73_712841 [Zea mays]         69   1e-09
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    69   1e-09
ref|XP_002456488.1| hypothetical protein SORBIDRAFT_03g037190 [S...    69   1e-09

>ref|XP_002327939.1| predicted protein [Populus trichocarpa] gi|222837348|gb|EEE75727.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
 Frame = +3

Query: 270 LRWQQSPTGFIKVNVDAAYIKESNKGTMSVVARQRQREFL-GAS*Q*LTHVSSSLIAKSL 446
           + W++ P GF+K+N DA+Y    +K +++ V R     +L G S +      S+  A+ L
Sbjct: 53  IHWKKPPLGFVKLNTDASYKYNCSKSSVAGVCRDEHGIWLFGFSSR--VKSGSAFEAELL 110

Query: 447 TMRMGLEFAWKNNWRRVIMESDCKKLVQCLNNE--HRTPNELQLIIAD-TTYLPCHMEVQ 617
            +R  L+ AW    +RVI+ESD + +V  + N+   +  N+++ +I +  +Y+       
Sbjct: 111 AVREALKLAWDKGLKRVIVESDSESVVNRIRNQLTRQPKNQIEAVILECQSYVSREWNCF 170

Query: 618 FQHTSRVSNNVAHSVAHWDYGGLMEMHWLHYPPRWLSTALDED 746
            QHT R  N  A ++         E+H  ++PP+ LS  L  D
Sbjct: 171 LQHTHREGNFAADALTKIIISESFELHVFNHPPKSLSLILLAD 213


>ref|XP_002328901.1| predicted protein [Populus trichocarpa] gi|222839331|gb|EEE77668.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 4/163 (2%)
 Frame = +3

Query: 270 LRWQQSPTGFIKVNVDAAYIKESNKGTMSVVARQRQREFL-GAS*Q*LTHVSSSLIAKSL 446
           +RW + P GF+K+N DA+Y   S+K +++ V R     +L G S +      S+  A+ L
Sbjct: 49  IRWNKPPPGFVKLNTDASYKYISSKSSIAGVCRDEHGIWLFGFSCR--VKSESAFEAELL 106

Query: 447 TMRMGLEFAWKNNWRRVIMESDCKKLVQCLNNE--HRTPNELQLIIAD-TTYLPCHMEVQ 617
            +R  L+ AW    ++VI+ESD + +V+ + N+   +  N+ + +I +   Y+    +  
Sbjct: 107 AVREALKLAWDKGLKKVILESDSENVVKRIRNQVTRQPKNQFEAVILECQAYVNRDWDCF 166

Query: 618 FQHTSRVSNNVAHSVAHWDYGGLMEMHWLHYPPRWLSTALDED 746
            QHT R  N  A ++         E+H   +PP  LS  L  D
Sbjct: 167 IQHTLREGNFAADALTKIGISESFELHVWKHPPESLSLILLAD 209


>gb|AFW68176.1| hypothetical protein ZEAMMB73_712841 [Zea mays]
          Length = 269

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
 Frame = +3

Query: 270 LRWQQSPTGFIKVNVDAAYIKESNKGTMSVVARQRQREFLGAS*Q*LTHVSSSLIAKSLT 449
           ++W+    G++K+N DAA++ E+ KG   VV R  Q E L A+ Q   H+  +L +++L 
Sbjct: 103 VKWKAPLKGWVKINSDAAFVAETGKGARGVVMRNSQGEVLAAAAQLYEHIPDALTSEALA 162

Query: 450 MRMGLEFAWKNNWRRVIMESDCKKLVQCLNNEHRTPNELQLI---IADTTYLPCHMEVQF 620
            R G+  A   +  +VI+E D   LV  L +E    + +  +   I + + +    +V F
Sbjct: 163 ARDGVVLAQMLSMEKVILEVDNSVLVALLRSEEGRRSAIAGLWQEIRERSVVFRSFDVSF 222

Query: 621 QHTSRVSNNVAHSVAHWDYGGLMEMHWLHYPPRWLSTALDED 746
              ++  N VAH  A         + WL   P WL  A   D
Sbjct: 223 --VNKEGNEVAHICASKAIELASVLFWLDCFPNWLMEAASRD 262


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
 Frame = +3

Query: 273  RWQQSPTGFIKVNVDAAYIKESNKGTMSVVARQRQREFLGAS*Q*LTHVSSSLIAKSLTM 452
            +WQ+   G+IK+NVD A   +  KG +  V R  Q  F+G   +   H +   + ++L +
Sbjct: 663  KWQKPDYGWIKINVDGAVFPD--KGAIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGV 720

Query: 453  RMGLEFAWKNNWRRVIMESDCKKLVQCLNNEHRTPNELQLIIADTTYLPCHM-EVQFQHT 629
            R  L +  + +  R+++E+DC ++VQ + ++         II D   +  H+ +VQ  + 
Sbjct: 721  REVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYA 780

Query: 630  SRVSNNVAHSVAHWDYGGLMEMHWLHYPPRWLSTALDEDI 749
             R +N+ AH +A+          W + PP+ + + L  D+
Sbjct: 781  RRSANSAAHCLANGACSFTSLHIWGYTPPQCILSCLHYDV 820


>ref|XP_002456488.1| hypothetical protein SORBIDRAFT_03g037190 [Sorghum bicolor]
           gi|241928463|gb|EES01608.1| hypothetical protein
           SORBIDRAFT_03g037190 [Sorghum bicolor]
          Length = 589

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
 Frame = +3

Query: 273 RWQQSPTGFIKVNVDAAYIKESNKGTMSVVARQRQREFLGAS*Q*LTHVSSSLIAKSLTM 452
           RW     G +K+N D A++++   G    V R     F  AS + L  V S LIA++  +
Sbjct: 427 RWSPPAPGMLKINSDGAFLQDRGTGAAGAVVRDSSGNFCAASARWLGPVGSVLIAEAEAI 486

Query: 453 RMGLEFAWKNNWRRVIMESDCKKLVQCLNNEHRTPNELQLIIAD-TTYLPCHMEVQFQHT 629
           R GL    +     +I E+D +++V    N  R  +E+  I+ +    +      +  H 
Sbjct: 487 RDGLRLIPQGTMEHIIGETDAREVVALWKNRTRQRSEIAAILKEIEEIVSAFTSFELIHV 546

Query: 630 SRVSNNVAHSVAHWDYGGLMEMHWLHYPPRWLSTALDED 746
            R +N+VAH+ A +    L    W   PP +L   L  D
Sbjct: 547 RREANSVAHTCARFASSSLDSHVWFS-PPSFLQRCLQSD 584


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