BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013157
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su...   237   1e-60
ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin...   237   1e-60
ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerase II su...   235   5e-60
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su...   234   1e-59
ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II su...   231   8e-59

>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Cucumis sativus] gi|449517969|ref|XP_004166016.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB9-like [Cucumis sativus]
          Length = 114

 Score =  237 bits (605), Expect = 1e-60
 Identities = 105/114 (92%), Positives = 111/114 (97%)
 Frame = +2

Query: 86  MSAMKFCRECNNILYPKEDRDQKILLFACRNCEHQEVADNNCVYRNEIHHPVGERTQVLQ 265
           MS MKFCRECNNILYPKEDRD+KILL+ACRNC+HQEVADNNCVYRNEIHH VGERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ 60

Query: 266 DVAADPTLPRTKSVRCAECGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 427
           DVAADPTLPRTK+VRCA+C HGEAVFFQATARGEEGMTLFFVCCNP+CGHRWRD
Sbjct: 61  DVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
           gi|255627167|gb|ACU13928.1| unknown [Glycine max]
          Length = 114

 Score =  237 bits (605), Expect = 1e-60
 Identities = 106/114 (92%), Positives = 111/114 (97%)
 Frame = +2

Query: 86  MSAMKFCRECNNILYPKEDRDQKILLFACRNCEHQEVADNNCVYRNEIHHPVGERTQVLQ 265
           MSAMKFCRECNNILYPKEDRDQK+LLFACRNC+HQEVADN CVYRNEIHH VGERTQVLQ
Sbjct: 1   MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQ 60

Query: 266 DVAADPTLPRTKSVRCAECGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 427
           DVAADPTLPRTKSVRC++C HGEAVFFQATARGEEGMTLFFVCCNP+CGHRWRD
Sbjct: 61  DVAADPTLPRTKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Glycine max]
          Length = 114

 Score =  235 bits (600), Expect = 5e-60
 Identities = 105/114 (92%), Positives = 110/114 (96%)
 Frame = +2

Query: 86  MSAMKFCRECNNILYPKEDRDQKILLFACRNCEHQEVADNNCVYRNEIHHPVGERTQVLQ 265
           MSAMKFCRECNNILYPKEDR+QK+LLFACRNC+HQEVADN CVYRNEI HPVGERTQVLQ
Sbjct: 1   MSAMKFCRECNNILYPKEDREQKVLLFACRNCDHQEVADNFCVYRNEIQHPVGERTQVLQ 60

Query: 266 DVAADPTLPRTKSVRCAECGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 427
           DVAADPTLPRTKSVRC +C HGEAVFFQATARGEEGMTLFFVCCNP+CGHRWRD
Sbjct: 61  DVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
           vinifera] gi|147769002|emb|CAN66735.1| hypothetical
           protein VITISV_024186 [Vitis vinifera]
           gi|296083263|emb|CBI22899.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  234 bits (597), Expect = 1e-59
 Identities = 104/114 (91%), Positives = 111/114 (97%)
 Frame = +2

Query: 86  MSAMKFCRECNNILYPKEDRDQKILLFACRNCEHQEVADNNCVYRNEIHHPVGERTQVLQ 265
           MS MKFCRECNNILYPKEDR+QKILL+ACRNC+HQEVA+NNCVYRNEIHH VGERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQ 60

Query: 266 DVAADPTLPRTKSVRCAECGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 427
           DVAADPTLPRTKSVRCA+C HGEAVFFQATARGEEGMTLFFVCCNP+CG+RWRD
Sbjct: 61  DVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_003579291.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Brachypodium distachyon] gi|326497375|dbj|BAK02272.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 114

 Score =  231 bits (590), Expect = 8e-59
 Identities = 103/114 (90%), Positives = 107/114 (93%)
 Frame = +2

Query: 86  MSAMKFCRECNNILYPKEDRDQKILLFACRNCEHQEVADNNCVYRNEIHHPVGERTQVLQ 265
           MSAMKFCRECNNILYPKEDRDQK+LLFACRNC+HQEVADNNCVYRN +HH  GE TQVLQ
Sbjct: 1   MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60

Query: 266 DVAADPTLPRTKSVRCAECGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 427
           DVA DPTLPRTK VRCA CGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWR+
Sbjct: 61  DVAGDPTLPRTKEVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114