BLASTX nr result

ID: Lithospermum22_contig00013144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013144
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...   342   6e-92
ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   340   4e-91
ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   337   3e-90
ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun...   335   7e-90
emb|CBI15329.3| unnamed protein product [Vitis vinifera]              335   7e-90

>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score =  342 bits (878), Expect = 6e-92
 Identities = 154/196 (78%), Positives = 179/196 (91%)
 Frame = -3

Query: 971 GAYIIAGTDHSIPHLYDVNTFQCYISASFQEIGASGAINQVRYSSSGGMYVTASKDGVIR 792
           G +++AGTDH I HLYDVNTFQCY+SA+  EIG +GAINQVRYSS+GGMYVTASKDG IR
Sbjct: 238 GDFLLAGTDHQIAHLYDVNTFQCYLSANVPEIGMNGAINQVRYSSTGGMYVTASKDGAIR 297

Query: 791 LWDGVTSDCVRTITGAHGTAEATSANFTKDQRYVLSCGKDSSVKLWEVATGRLVKQYIGA 612
           LWDGVT++C+R+I GAHGTAE+TSA FTKDQR+VLSCGKDSS+KLWEV +GRLVKQYIGA
Sbjct: 298 LWDGVTANCIRSIVGAHGTAESTSATFTKDQRFVLSCGKDSSIKLWEVGSGRLVKQYIGA 357

Query: 611 THMQQRCQAVFNNTEEFVLCIDEQSNEIVIWDSLTSEKVARWPTNHVGAPRWLEHSPTEA 432
           TH Q RCQAVFN TEEFV+ IDE SNEI+IWD+LT+EKVARWP+NH GAPRW+EHSP EA
Sbjct: 358 THTQLRCQAVFNETEEFVISIDEPSNEIIIWDALTAEKVARWPSNHNGAPRWIEHSPVEA 417

Query: 431 AFVTCGTDRSIRYWKD 384
           AF++CGTDRS+R+WKD
Sbjct: 418 AFISCGTDRSVRFWKD 433


>ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 435

 Score =  340 bits (871), Expect = 4e-91
 Identities = 151/196 (77%), Positives = 180/196 (91%)
 Frame = -3

Query: 971 GAYIIAGTDHSIPHLYDVNTFQCYISASFQEIGASGAINQVRYSSSGGMYVTASKDGVIR 792
           G Y++AGTDH IPHLYDVNTFQC++SA+  EIG +GAINQ+RYS++G MYVTASKDG +R
Sbjct: 238 GDYLLAGTDHQIPHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVR 297

Query: 791 LWDGVTSDCVRTITGAHGTAEATSANFTKDQRYVLSCGKDSSVKLWEVATGRLVKQYIGA 612
           LWDG+ + C+R+I  AHGTAEATSA FTKD+RYVLSCGKDSSVKLW+V TGRLVKQY+GA
Sbjct: 298 LWDGIGAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGA 357

Query: 611 THMQQRCQAVFNNTEEFVLCIDEQSNEIVIWDSLTSEKVARWPTNHVGAPRWLEHSPTEA 432
           TH+Q RCQAVFN+TEEFVL IDE SNEIVIWD+LT+E+VARWP+NHVGAPRWLEHSPTE+
Sbjct: 358 THIQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTES 417

Query: 431 AFVTCGTDRSIRYWKD 384
           AF++CGTD+SIR+WK+
Sbjct: 418 AFISCGTDKSIRFWKE 433


>ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 437

 Score =  337 bits (864), Expect = 3e-90
 Identities = 150/196 (76%), Positives = 179/196 (91%)
 Frame = -3

Query: 971 GAYIIAGTDHSIPHLYDVNTFQCYISASFQEIGASGAINQVRYSSSGGMYVTASKDGVIR 792
           G Y++AGTDH IPHLYDVNTFQC++SA+  EIG +GAINQ+RYS++G MYVTASKDG +R
Sbjct: 240 GDYLLAGTDHQIPHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSMYVTASKDGAVR 299

Query: 791 LWDGVTSDCVRTITGAHGTAEATSANFTKDQRYVLSCGKDSSVKLWEVATGRLVKQYIGA 612
           LWDG+ + C+R+I  AHGTAEATSA FTKD+RYVLSC KDSSVKLW+V TGRLVKQY+GA
Sbjct: 300 LWDGIGAKCIRSIVSAHGTAEATSAKFTKDERYVLSCXKDSSVKLWDVGTGRLVKQYVGA 359

Query: 611 THMQQRCQAVFNNTEEFVLCIDEQSNEIVIWDSLTSEKVARWPTNHVGAPRWLEHSPTEA 432
           TH+Q RCQAVFN+TEEFVL IDE SNEIVIWD+LT+E+VARWP+NHVGAPRWLEHSPTE+
Sbjct: 360 THIQLRCQAVFNDTEEFVLSIDEPSNEIVIWDALTAERVARWPSNHVGAPRWLEHSPTES 419

Query: 431 AFVTCGTDRSIRYWKD 384
           AF++CGTD+SIR+WK+
Sbjct: 420 AFISCGTDKSIRFWKE 435


>ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis
           vinifera]
          Length = 440

 Score =  335 bits (860), Expect = 7e-90
 Identities = 152/197 (77%), Positives = 180/197 (91%)
 Frame = -3

Query: 971 GAYIIAGTDHSIPHLYDVNTFQCYISASFQEIGASGAINQVRYSSSGGMYVTASKDGVIR 792
           G +++AGTDH + HLYDVNTFQCY+SA+ Q++G S +INQVRYSS+G MYVTASKDG IR
Sbjct: 243 GDFLLAGTDHPVAHLYDVNTFQCYLSANVQDLGISASINQVRYSSNGDMYVTASKDGAIR 302

Query: 791 LWDGVTSDCVRTITGAHGTAEATSANFTKDQRYVLSCGKDSSVKLWEVATGRLVKQYIGA 612
           LWDGVT++CVR+I GAHGTAEATSA+FTKDQR+VLSCGKDSSVKLWE+ +G+LVKQY+GA
Sbjct: 303 LWDGVTANCVRSIVGAHGTAEATSASFTKDQRFVLSCGKDSSVKLWEIGSGKLVKQYLGA 362

Query: 611 THMQQRCQAVFNNTEEFVLCIDEQSNEIVIWDSLTSEKVARWPTNHVGAPRWLEHSPTEA 432
            H Q RCQAVFN TEEFVL IDEQSNEIV+WD+LT+E VAR P+NH+GAPRWLEHSPTEA
Sbjct: 363 AHTQLRCQAVFNETEEFVLSIDEQSNEIVVWDALTAEIVARLPSNHIGAPRWLEHSPTEA 422

Query: 431 AFVTCGTDRSIRYWKDI 381
           AFV+CGTDRS+R+WK+I
Sbjct: 423 AFVSCGTDRSVRFWKEI 439


>emb|CBI15329.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score =  335 bits (860), Expect = 7e-90
 Identities = 152/197 (77%), Positives = 180/197 (91%)
 Frame = -3

Query: 971 GAYIIAGTDHSIPHLYDVNTFQCYISASFQEIGASGAINQVRYSSSGGMYVTASKDGVIR 792
           G +++AGTDH + HLYDVNTFQCY+SA+ Q++G S +INQVRYSS+G MYVTASKDG IR
Sbjct: 287 GDFLLAGTDHPVAHLYDVNTFQCYLSANVQDLGISASINQVRYSSNGDMYVTASKDGAIR 346

Query: 791 LWDGVTSDCVRTITGAHGTAEATSANFTKDQRYVLSCGKDSSVKLWEVATGRLVKQYIGA 612
           LWDGVT++CVR+I GAHGTAEATSA+FTKDQR+VLSCGKDSSVKLWE+ +G+LVKQY+GA
Sbjct: 347 LWDGVTANCVRSIVGAHGTAEATSASFTKDQRFVLSCGKDSSVKLWEIGSGKLVKQYLGA 406

Query: 611 THMQQRCQAVFNNTEEFVLCIDEQSNEIVIWDSLTSEKVARWPTNHVGAPRWLEHSPTEA 432
            H Q RCQAVFN TEEFVL IDEQSNEIV+WD+LT+E VAR P+NH+GAPRWLEHSPTEA
Sbjct: 407 AHTQLRCQAVFNETEEFVLSIDEQSNEIVVWDALTAEIVARLPSNHIGAPRWLEHSPTEA 466

Query: 431 AFVTCGTDRSIRYWKDI 381
           AFV+CGTDRS+R+WK+I
Sbjct: 467 AFVSCGTDRSVRFWKEI 483


Top