BLASTX nr result

ID: Lithospermum22_contig00013139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013139
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...   108   5e-22
ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vi...   108   6e-22
emb|CBI34603.3| unnamed protein product [Vitis vinifera]              108   6e-22
dbj|BAD33090.1| putative RNA-binding protein RBP37 [Oryza sativa...   108   8e-22
dbj|BAD33089.1| putative RNA-binding protein RBP37 [Oryza sativa...   108   8e-22

>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
           gi|223541913|gb|EEF43459.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 379

 Score =  108 bits (271), Expect = 5e-22
 Identities = 52/62 (83%), Positives = 56/62 (90%)
 Frame = +3

Query: 3   VYRIRMLGDFHHPTRIAFVEFVLANSAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPHAM 182
           VYR+R+LGD+HH TRIAFVEFV+A SAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP   
Sbjct: 318 VYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRIP 377

Query: 183 TH 188
            H
Sbjct: 378 MH 379


>ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
          Length = 398

 Score =  108 bits (270), Expect = 6e-22
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = +3

Query: 3   VYRIRMLGDFHHPTRIAFVEFVLANSAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPHAM 182
           VYR+R+LGD+HH TRIAFVEF++A SAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP   
Sbjct: 337 VYRLRLLGDYHHSTRIAFVEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLP 396

Query: 183 TH 188
            H
Sbjct: 397 IH 398


>emb|CBI34603.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  108 bits (270), Expect = 6e-22
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = +3

Query: 3   VYRIRMLGDFHHPTRIAFVEFVLANSAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPHAM 182
           VYR+R+LGD+HH TRIAFVEF++A SAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP   
Sbjct: 336 VYRLRLLGDYHHSTRIAFVEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLP 395

Query: 183 TH 188
            H
Sbjct: 396 IH 397


>dbj|BAD33090.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
          Length = 201

 Score =  108 bits (269), Expect = 8e-22
 Identities = 50/62 (80%), Positives = 56/62 (90%)
 Frame = +3

Query: 3   VYRIRMLGDFHHPTRIAFVEFVLANSAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPHAM 182
           VYR+R+LGD+HH TRIAFVEFV+A SA AALNCSGV+LGSLPIRVSPSKTPVRPRAP  +
Sbjct: 140 VYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQL 199

Query: 183 TH 188
            H
Sbjct: 200 MH 201


>dbj|BAD33089.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
           gi|182375457|dbj|BAG24017.1| RNA-binding protein [Oryza
           sativa Japonica Group] gi|215736921|dbj|BAG95850.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222639804|gb|EEE67936.1| hypothetical protein
           OsJ_25822 [Oryza sativa Japonica Group]
          Length = 302

 Score =  108 bits (269), Expect = 8e-22
 Identities = 50/62 (80%), Positives = 56/62 (90%)
 Frame = +3

Query: 3   VYRIRMLGDFHHPTRIAFVEFVLANSAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPHAM 182
           VYR+R+LGD+HH TRIAFVEFV+A SA AALNCSGV+LGSLPIRVSPSKTPVRPRAP  +
Sbjct: 241 VYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQL 300

Query: 183 TH 188
            H
Sbjct: 301 MH 302


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