BLASTX nr result
ID: Lithospermum22_contig00013135
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00013135
(2142 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP73462.1| F-box/kelch protein [Camellia sinensis] 63 3e-17
ref|XP_002525399.1| conserved hypothetical protein [Ricinus comm... 60 2e-16
ref|XP_002315685.1| f-box family protein [Populus trichocarpa] g... 65 4e-15
ref|XP_004135258.1| PREDICTED: F-box/kelch-repeat protein At1g23... 56 4e-15
ref|XP_004155362.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-... 56 5e-15
>gb|AFP73462.1| F-box/kelch protein [Camellia sinensis]
Length = 394
Score = 58.5 bits (140), Expect(2) = 3e-17
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 11/78 (14%)
Frame = +2
Query: 278 IIIHSQST-RGYDPRSHVWIEASQ--PSI---QNICTLRSSTSNLLYMITLKYFSFSRNP 439
+I H+ +T +DPRSHVWIE Q P I Q I TLRSS SNLLYM++ SFS +P
Sbjct: 81 LIAHTHTTSHAFDPRSHVWIEIKQQQPPIKQQQQISTLRSSHSNLLYMLSPSKLSFSFDP 140
Query: 440 LYPT*QH-----VSRINP 478
L+ T H V R++P
Sbjct: 141 LHLTWHHTDAPLVWRVDP 158
Score = 58.2 bits (139), Expect(2) = 3e-17
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = +3
Query: 153 GDLLEIILSHVPLVDLVRASRVSKLWNQATISSLNNFNKPKP 278
GD+LE ILS+VPL+DLV AS V K W +A SSL + NKPKP
Sbjct: 38 GDMLETILSYVPLIDLVPASHVCKSWKRAVFSSLRHLNKPKP 79
Score = 62.8 bits (151), Expect(2) = 5e-11
Identities = 47/162 (29%), Positives = 71/162 (43%)
Frame = +3
Query: 1458 PKKRTWSQPYHIRPDPKTFYSVLAHSGRRVXXXXXXXXTCEKIEGVKIYKVKIKDGHIIC 1637
P+ +TWS Y +RPDP FYSV+A S R+ + + GVK++ V +
Sbjct: 236 PETKTWSGQYDLRPDPCIFYSVIAFSDDRL-ILAGLIGEMDNVRGVKLWGVNCESFEC-- 292
Query: 1638 NXXXXXXXXXXXXXXRNDMFGFMEVNVCMAGDFVYVYNSTLXXXXXXXXXXXXXXWKWWS 1817
+ + F + VC AG V +YN L +WWS
Sbjct: 293 -EEIGEMPLEFLEKLKGESFQLSSIAVCFAGKVVNIYN-PLMAEEVFMCEFVDGGCQWWS 350
Query: 1818 LANAASSDRNRIMERNVIACVEVGLLEELRGVMFQKGRRVKV 1943
+ NAA++ NR ME V +VG +E+L ++ + RR V
Sbjct: 351 VRNAAANRWNR-METVVFTSSKVG-IEDLHRAVWSENRRFAV 390
Score = 33.1 bits (74), Expect(2) = 5e-11
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +1
Query: 1291 CYHRR*SDKVCVEMYNLESSRVDHVRV--------HANKWLSSIVVEDNLFIMENSTGVT 1446
CY D + VE+Y++E+ + A+ WLS + LF+ E +GVT
Sbjct: 174 CYFE--DDPLAVEIYDVETRAWELCDPMPAILKDSSASTWLSIASDDLKLFVTEKHSGVT 231
Query: 1447 HIFDPK 1464
H FDP+
Sbjct: 232 HTFDPE 237
>ref|XP_002525399.1| conserved hypothetical protein [Ricinus communis]
gi|223535362|gb|EEF37037.1| conserved hypothetical
protein [Ricinus communis]
Length = 381
Score = 60.1 bits (144), Expect(2) = 2e-16
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 8/64 (12%)
Frame = +2
Query: 278 IIIHSQSTRG--------YDPRSHVWIEASQPSIQNICTLRSSTSNLLYMITLKYFSFSR 433
+I+H+Q+TR YDPRS VW++ QP I I LRSS S LLYM++ FSFS
Sbjct: 64 LILHTQATRSPYSTAAHAYDPRSDVWVQVQQPPISYISALRSSHSTLLYMLSPSNFSFSF 123
Query: 434 NPLY 445
+P++
Sbjct: 124 DPMH 127
Score = 53.9 bits (128), Expect(2) = 2e-16
Identities = 23/52 (44%), Positives = 39/52 (75%)
Frame = +3
Query: 123 ERKNDEAPIFGDLLEIILSHVPLVDLVRASRVSKLWNQATISSLNNFNKPKP 278
E++ +++ I GD+LE I++ VPL+DL+ +VS WN+A ++SL+ FN+ KP
Sbjct: 11 EQEQEQSTIHGDILESIVTRVPLIDLLSTFQVSISWNRAVLTSLHRFNRIKP 62
>ref|XP_002315685.1| f-box family protein [Populus trichocarpa]
gi|222864725|gb|EEF01856.1| f-box family protein
[Populus trichocarpa]
Length = 408
Score = 64.7 bits (156), Expect(2) = 4e-15
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = +2
Query: 287 HSQSTRGYDPRSHVWIEASQPSIQNICTLRSSTSNLLYMITLKYFSFSRNPLYPT*QHVS 466
HS + YDPRSHVWIE +PSI+ I LRSS S LLYM++ S S +PL+ T H+
Sbjct: 81 HSTTAHAYDPRSHVWIEIHEPSIKFISALRSSHSTLLYMLSPSSLSLSYDPLHLTWHHIK 140
Query: 467 -----RINP 478
RI+P
Sbjct: 141 APLIWRIDP 149
Score = 45.1 bits (105), Expect(2) = 4e-15
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +3
Query: 135 DEAPIFGDLLEIILSHVPLVDLVRASRVSKLWNQATISSL 254
D I GD+LE I +HVPLVDLV AS V+K W A +SL
Sbjct: 13 DSNQIHGDILESIFNHVPLVDLVPASYVTKSWKLAVSTSL 52
>ref|XP_004135258.1| PREDICTED: F-box/kelch-repeat protein At1g23390-like [Cucumis
sativus]
Length = 376
Score = 56.2 bits (134), Expect(2) = 4e-15
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +3
Query: 135 DEAPIFGDLLEIILSHVPLVDLVRASRVSKLWNQATISSLNNFNKPKP 278
D A + GD+LE ILSHV L+DL +S VS+ W +A SSL++FN PKP
Sbjct: 11 DGAVVHGDILESILSHVHLIDLASSSCVSRGWERAVSSSLSHFNSPKP 58
Score = 53.5 bits (127), Expect(2) = 4e-15
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +2
Query: 284 IHSQSTRGYDPRSHVWIEAS--QPSIQNICTLRSSTSNLLYMITLKYFSFSRNPLYPT*Q 457
+ S ST YDPRS VW++ + P + LRSS S LLY +T FSFS +PL+ T
Sbjct: 65 LSSASTAAYDPRSAVWMDINCRHPITPSTAPLRSSHSTLLYALTPSQFSFSIDPLHLTWH 124
Query: 458 HVS 466
HVS
Sbjct: 125 HVS 127
>ref|XP_004155362.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-repeat protein
At1g23390-like [Cucumis sativus]
Length = 376
Score = 55.8 bits (133), Expect(2) = 5e-15
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +3
Query: 135 DEAPIFGDLLEIILSHVPLVDLVRASRVSKLWNQATISSLNNFNKPKP 278
D A + GD+LE ILSHV L+DL +S VS+ W +A SSL++FN PKP
Sbjct: 11 DGAVVHGDILESILSHVHLIDLASSSCVSRGWERAVSSSLSHFNXPKP 58
Score = 53.5 bits (127), Expect(2) = 5e-15
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +2
Query: 284 IHSQSTRGYDPRSHVWIEAS--QPSIQNICTLRSSTSNLLYMITLKYFSFSRNPLYPT*Q 457
+ S ST YDPRS VW++ + P + LRSS S LLY +T FSFS +PL+ T
Sbjct: 65 LSSASTAAYDPRSAVWMDINCRHPITPSTAPLRSSHSTLLYALTPSQFSFSIDPLHLTWH 124
Query: 458 HVS 466
HVS
Sbjct: 125 HVS 127