BLASTX nr result

ID: Lithospermum22_contig00013092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013092
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protei...   115   1e-23
ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protei...   115   1e-23
ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protei...   115   1e-23
ref|NP_190188.1| RNA recognition motif-containing protein [Arabi...   114   2e-23
ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arab...   113   4e-23

>ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
           sativus]
          Length = 95

 Score =  115 bits (287), Expect = 1e-23
 Identities = 54/80 (67%), Positives = 68/80 (85%)
 Frame = -1

Query: 653 MARSLFVSRLSFYTTTEQLRRIFSPFGKITEARLVRDPKTQRPKGFGFVSFQSEIDAQIA 474
           +   LF+SRLS YTT E+L+ +FSPFG I+EARL+RDPKT+RPKGFGFV+FQS  +A+ A
Sbjct: 5   LGSELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKA 64

Query: 473 LNSLNGRIVDGRLIFVEIAK 414
           L +++GRIVDGRLIFVE AK
Sbjct: 65  LKAMDGRIVDGRLIFVEFAK 84


>ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
           [Cucumis sativus] gi|449435013|ref|XP_004135290.1|
           PREDICTED: cold-inducible RNA-binding protein B-like
           isoform 2 [Cucumis sativus]
          Length = 89

 Score =  115 bits (287), Expect = 1e-23
 Identities = 54/80 (67%), Positives = 68/80 (85%)
 Frame = -1

Query: 653 MARSLFVSRLSFYTTTEQLRRIFSPFGKITEARLVRDPKTQRPKGFGFVSFQSEIDAQIA 474
           +   LF+SRLS YTT E+L+ +FSPFG I+EARL+RDPKT+RPKGFGFV+FQS  +A+ A
Sbjct: 5   LGSELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKA 64

Query: 473 LNSLNGRIVDGRLIFVEIAK 414
           L +++GRIVDGRLIFVE AK
Sbjct: 65  LKAMDGRIVDGRLIFVEFAK 84


>ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|297746123|emb|CBI16179.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  115 bits (287), Expect = 1e-23
 Identities = 54/76 (71%), Positives = 67/76 (88%)
 Frame = -1

Query: 641 LFVSRLSFYTTTEQLRRIFSPFGKITEARLVRDPKTQRPKGFGFVSFQSEIDAQIALNSL 462
           +FV+RLS YTT E+L  +FSPFG +T+ARL++DPKTQRPKGFGFV F+SE+DA+ AL ++
Sbjct: 27  IFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDAEKALKAM 86

Query: 461 NGRIVDGRLIFVEIAK 414
           NGRIV GRLIFVEIAK
Sbjct: 87  NGRIVRGRLIFVEIAK 102


>ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|7630030|emb|CAB88326.1| RNA binding protein-like
           [Arabidopsis thaliana] gi|46931202|gb|AAT06405.1|
           At3g46020 [Arabidopsis thaliana]
           gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis
           thaliana] gi|332644581|gb|AEE78102.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 102

 Score =  114 bits (285), Expect = 2e-23
 Identities = 55/80 (68%), Positives = 69/80 (86%)
 Frame = -1

Query: 653 MARSLFVSRLSFYTTTEQLRRIFSPFGKITEARLVRDPKTQRPKGFGFVSFQSEIDAQIA 474
           ++  LFVSRLS YTT + LR++FSPFG+I EARL+RD +TQRPKGFGF++F SE DA+ A
Sbjct: 5   ISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKA 64

Query: 473 LNSLNGRIVDGRLIFVEIAK 414
           L SL+G+IVDGRLIFVE+AK
Sbjct: 65  LKSLDGKIVDGRLIFVEVAK 84


>ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
           lyrata] gi|297323288|gb|EFH53709.1| hypothetical protein
           ARALYDRAFT_905782 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score =  113 bits (283), Expect = 4e-23
 Identities = 54/80 (67%), Positives = 70/80 (87%)
 Frame = -1

Query: 653 MARSLFVSRLSFYTTTEQLRRIFSPFGKITEARLVRDPKTQRPKGFGFVSFQSEIDAQIA 474
           ++  LFVSRLS YTT + LR++FSPFG+I EARL+RD +TQRPKGFGF++F+SE DA+ A
Sbjct: 5   ISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARKA 64

Query: 473 LNSLNGRIVDGRLIFVEIAK 414
           L SL+G+IV+GRLIFVE+AK
Sbjct: 65  LKSLDGKIVEGRLIFVEVAK 84


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