BLASTX nr result

ID: Lithospermum22_contig00013071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013071
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   226   6e-57
ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis prot...   226   6e-57
emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]   224   2e-56
ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot...   224   2e-56
ref|XP_003538140.1| PREDICTED: probable ribosome biogenesis prot...   222   6e-56

>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  226 bits (575), Expect = 6e-57
 Identities = 114/168 (67%), Positives = 128/168 (76%), Gaps = 6/168 (3%)
 Frame = +3

Query: 96  MRIEKCWFCSSSVYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 275
           MR+EKCWFCSS+VYPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 276 KDMTQDSTFEFERKRNRPEKYDRNLTADVLTAIKKIDKVRSTRSAQHIKTRVSGXXXXXX 455
           KDMTQDSTFEFERKRNRPE+YDRNL  +VL AI KIDK+R TR  +H K R+ G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLL 120

Query: 456 XXXXXXXXD-IGMIKAPDSLQQAPE----KLKVGVSHKQSVED-KMEE 581
                     I ++KAP  LQQ P     K+KV VS +QS E+  MEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_003539809.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  226 bits (575), Expect = 6e-57
 Identities = 112/168 (66%), Positives = 129/168 (76%), Gaps = 6/168 (3%)
 Frame = +3

Query: 96  MRIEKCWFCSSSVYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 275
           MR+EKCWFCSS++YPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 276 KDMTQDSTFEFERKRNRPEKYDRNLTADVLTAIKKIDKVRSTRSAQHIKTRVSGXXXXXX 455
           KDMTQDSTFEFERKRNRPE+YDRNL  +VL AI KIDK+R TR  +H K R+ G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREEKHHKNRMKGKKQKLQ 120

Query: 456 XXXXXXXXD-IGMIKAPDSLQQAPE----KLKVGVSHKQSVED-KMEE 581
                     I ++KAP  LQ+ P     K+KVGVS +QS ++  MEE
Sbjct: 121 MEAARELEQGISLVKAPSVLQKDPSLTLPKIKVGVSQQQSEDNHPMEE 168


>emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]
          Length = 1073

 Score =  224 bits (571), Expect = 2e-56
 Identities = 116/170 (68%), Positives = 128/170 (75%), Gaps = 6/170 (3%)
 Frame = +3

Query: 90  SRMRIEKCWFCSSSVYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRL 269
           S MR+EKCWFCSS+VYPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKAYRRL
Sbjct: 55  SIMRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRL 114

Query: 270 HGKDMTQDSTFEFERKRNRPEKYDRNLTADVLTAIKKIDKVRSTRSAQHIKTRVSG-XXX 446
           HGKDMTQDSTFEFERKRNRPE+YDRN+  + L AIKKIDKVR  R A+H   R+ G    
Sbjct: 115 HGKDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAK 174

Query: 447 XXXXXXXXXXXDIGMIKAPDSLQQAPE----KLKVGVSHKQSVED-KMEE 581
                       I M+KAP  LQQ P     K+KV VS +QS E+  MEE
Sbjct: 175 EQREAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEE 224


>ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297734845|emb|CBI17079.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  224 bits (570), Expect = 2e-56
 Identities = 115/168 (68%), Positives = 127/168 (75%), Gaps = 6/168 (3%)
 Frame = +3

Query: 96  MRIEKCWFCSSSVYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 275
           MR+EKCWFCSS+VYPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 276 KDMTQDSTFEFERKRNRPEKYDRNLTADVLTAIKKIDKVRSTRSAQHIKTRVSG-XXXXX 452
           KDMTQDSTFEFERKRNRPE+YDRN+  + L AIKKIDKVR  R A+H   R+ G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 453 XXXXXXXXXDIGMIKAPDSLQQAPE----KLKVGVSHKQSVED-KMEE 581
                     I M+KAP  LQQ P     K+KV VS +QS E+  MEE
Sbjct: 121 REAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_003538140.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 169

 Score =  222 bits (566), Expect = 6e-56
 Identities = 111/169 (65%), Positives = 126/169 (74%), Gaps = 7/169 (4%)
 Frame = +3

Query: 96  MRIEKCWFCSSSVYPGHGIQFVRNDAKIFKFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 275
           MR+EKCWFCSS+ YPGHGIQFVRNDAKIF+FCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTTYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 276 KDMTQDSTFEFERKRNRPEKYDRNLTADVLTAIKKIDKVRSTRSAQHIKTRVSGXXXXXX 455
           KDMTQDSTFEFERKRNRPE+YDRNL  +VL AI KIDK+R  R  +H K R+ G      
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVAREEKHHKNRMKGKKQKLH 120

Query: 456 XXXXXXXXD-IGMIKAPDSLQQAP----EKLKVGVSHKQSVEDK--MEE 581
                     I ++KAP  LQ+ P     K+KVGVS +Q  E+   MEE
Sbjct: 121 MEAVRELEQGISLVKAPSVLQKDPFLTLPKIKVGVSQQQQSEENHPMEE 169


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