BLASTX nr result

ID: Lithospermum22_contig00013070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013070
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531346.1| structural constituent of ribosome, putative...    77   4e-12
ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana...    74   3e-11
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]    74   4e-11
ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro...    73   6e-11
ref|XP_003516947.1| PREDICTED: 30S ribosomal protein S31, chloro...    72   8e-11

>ref|XP_002531346.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223529044|gb|EEF31030.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 116

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 35/70 (50%), Positives = 45/70 (64%)
 Frame = +2

Query: 293 ASSTLPMIYCGRGDRKTAKGKRFSHSFGNARPHXXXXXXXXXXXXXXXXXXXXXXYDDGE 472
           ++S +P +YCGRGD+KTAKGKRF+HSFGNARP                       ++DGE
Sbjct: 46  STSPIPFVYCGRGDKKTAKGKRFNHSFGNARPRNKNKGRGPPRIPVPSSPPTNDIFEDGE 105

Query: 473 VIKIEIDESL 502
           V+KI+IDESL
Sbjct: 106 VVKIDIDESL 115


>ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana]
           gi|75275034|sp|O80439.1|RR31_ARATH RecName: Full=30S
           ribosomal protein S31, chloroplastic; AltName:
           Full=Plastid-specific 30S ribosomal protein 4;
           Short=PSRP-4; Flags: Precursor
           gi|7578852|gb|AAF64153.1|AF236826_1 plastid-specific
           ribosomal protein 4 precursor [Arabidopsis thaliana]
           gi|3335362|gb|AAC27163.1| 30S ribosomal protein S31
           [Arabidopsis thaliana] gi|15529182|gb|AAK97685.1|
           At2g38140/F16M14.7 [Arabidopsis thaliana]
           gi|16974357|gb|AAL31104.1| At2g38140/F16M14.7
           [Arabidopsis thaliana] gi|21618289|gb|AAM67339.1| 30S
           ribosomal protein S31 [Arabidopsis thaliana]
           gi|330254400|gb|AEC09494.1| 30S ribosomal protein S31
           [Arabidopsis thaliana]
          Length = 118

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 35/70 (50%), Positives = 45/70 (64%)
 Frame = +2

Query: 293 ASSTLPMIYCGRGDRKTAKGKRFSHSFGNARPHXXXXXXXXXXXXXXXXXXXXXXYDDGE 472
           +SS++P++YCGRGDRKTAKGKRF+HSFGNARP                       +++ E
Sbjct: 46  SSSSIPLVYCGRGDRKTAKGKRFNHSFGNARPRNKSKGRGPERVPVPPAPPRKDKFENDE 105

Query: 473 VIKIEIDESL 502
            IKI+IDESL
Sbjct: 106 KIKIDIDESL 115


>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
          Length = 117

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 35/69 (50%), Positives = 42/69 (60%)
 Frame = +2

Query: 296 SSTLPMIYCGRGDRKTAKGKRFSHSFGNARPHXXXXXXXXXXXXXXXXXXXXXXYDDGEV 475
           S  +P +YCGRGD+KTAKGKRF+HSFGNARP                       ++D EV
Sbjct: 47  SPPIPSVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEV 106

Query: 476 IKIEIDESL 502
           +KIEIDESL
Sbjct: 107 VKIEIDESL 115


>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
           vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
           product [Vitis vinifera]
          Length = 118

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 34/66 (51%), Positives = 41/66 (62%)
 Frame = +2

Query: 305 LPMIYCGRGDRKTAKGKRFSHSFGNARPHXXXXXXXXXXXXXXXXXXXXXXYDDGEVIKI 484
           +P +YCGRGD+KTAKGKRF+HSFGNARP                       ++D EV+KI
Sbjct: 51  IPSVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKI 110

Query: 485 EIDESL 502
           EIDESL
Sbjct: 111 EIDESL 116


>ref|XP_003516947.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Glycine
           max]
          Length = 121

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 36/68 (52%), Positives = 40/68 (58%)
 Frame = +2

Query: 299 STLPMIYCGRGDRKTAKGKRFSHSFGNARPHXXXXXXXXXXXXXXXXXXXXXXYDDGEVI 478
           S  P +YCGRGDRKTAKGKRF+HSFGNARP                        +D EV+
Sbjct: 51  SPTPSVYCGRGDRKTAKGKRFAHSFGNARPKDKKKGRGPLRPYAPPAPSKKDRLEDNEVV 110

Query: 479 KIEIDESL 502
           KIEIDESL
Sbjct: 111 KIEIDESL 118


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