BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013063
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                79   1e-19
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    79   8e-19
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 69   5e-17
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    65   1e-16
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    67   2e-16

>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 79.3 bits (194), Expect(2) = 1e-19
 Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 4/120 (3%)
 Frame = -3

Query: 350 LPTQTIHDVEKLIKVYLWKGAVDGSYMPKVFWK*AVLKKEEGGFGIKDIYI*NIACVAKH 171
           LP Q I +++KL   +LW G+   S+  K+ W      K EGG G++++   N     K 
Sbjct: 478 LPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKL 537

Query: 170 I*NVCCNKEAL---WVHTYGIK*QSIWGI-QSRSIYSWLWRKILHLKDKIKPYVKMQVRN 3
           +  +  N  +L   WV  Y I+ +SIW + QS S+ SW+WRKIL ++D  K + +++V N
Sbjct: 538 VWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGN 597



 Score = 42.4 bits (98), Expect(2) = 1e-19
 Identities = 22/56 (39%), Positives = 33/56 (58%)
 Frame = -2

Query: 540 YFAGVSDHQANDLSGILRISISGLLVRYLGIPLIIKQLCTSDCRGLIEKIK*RFET 373
           Y AGVS     +++      +  L VRYLG+PL+ K+L ++D   L+E+IK R  T
Sbjct: 391 YMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIAT 446


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 79.0 bits (193), Expect(2) = 8e-19
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
 Frame = -3

Query: 350 LPTQTIHDVEKLIKVYLWKGAVDGSYMPKVFWK*AVLKKEEGGFGIKDIYI*NIACVAKH 171
           LP + + +++KL   +LW G    +   K+ W+     K EGG G++ I   N  C  K 
Sbjct: 349 LPRECVREIDKLCSAFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKL 408

Query: 170 I*NVCCNKEALWV---HTYGIK*QSIWGIQSRSIYSWLWRKILHLKDKIKPYVKMQVRN 3
           I  +    ++LWV    TY +K  + W  +S S  SW+W+K+L  +D  K + K+ +RN
Sbjct: 409 IWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDIRN 467



 Score = 39.7 bits (91), Expect(2) = 8e-19
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = -2

Query: 540 YFAGVSDHQANDLSGILRISISGLLVRYLGIPLIIKQLCTSDCRGLIEKIK*RFET 373
           YFAG+S     +       ++  L VRYL +PL+ K+  + D   L+E+IK R  T
Sbjct: 262 YFAGISKSVCKEFEDQFHFAVGRLPVRYLCLPLVTKRFTSQDYSPLLEQIKRRIGT 317


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 68.9 bits (167), Expect(2) = 5e-17
 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
 Frame = -3

Query: 350 LPTQTIHDVEKLIKVYLWKGAVDGSYMPKVFWK*AVLKKEEGGFGIKDIYI*NIACVAKH 171
           LP   I ++EKL   +LW G        K+ W      K+EGG GIK +   N     K 
Sbjct: 404 LPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKL 463

Query: 170 I*NVCCNKEALWVH---TYGIK*QSIWGIQSR-SIYSWLWRKILHLKDKIKPYVKMQVRN 3
           I  +   + +LWV+   TY I+  S W    R S+ SW+W+K+L  +D  K   K+++++
Sbjct: 464 IWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLKYRDVAKSMCKVEIKS 523



 Score = 43.5 bits (101), Expect(2) = 5e-17
 Identities = 20/51 (39%), Positives = 32/51 (62%)
 Frame = -2

Query: 540 YFAGVSDHQANDLSGILRISISGLLVRYLGIPLIIKQLCTSDCRGLIEKIK 388
           Y AGVS+   N++      +   L VRYLG+PL+ KQ+ T+D   L++K++
Sbjct: 317 YLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVR 367


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 65.5 bits (158), Expect(2) = 1e-16
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
 Frame = -3

Query: 350  LPTQTIHDVEKLIKVYLWKGAVDGSYMPKVFWK*AVLKKEEGGFGIKDIYI*NIACVAKH 171
            LP + I ++EK+   +LW G    S   K+ W      K+EGG G++ +   N  C  K 
Sbjct: 831  LPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKL 890

Query: 170  I*NVCCNKEAL---WVHTYGIK*QSIWGI-QSRSIYSWLWRKILHLKDKIKPYVKMQVRN 3
            +  +  +  +L   WV  + ++  S W + Q+ S  SW+W+K+L  ++  K   K++V N
Sbjct: 891  VWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGN 950



 Score = 45.8 bits (107), Expect(2) = 1e-16
 Identities = 23/53 (43%), Positives = 34/53 (64%)
 Frame = -2

Query: 540 YFAGVSDHQANDLSGILRISISGLLVRYLGIPLIIKQLCTSDCRGLIEKIK*R 382
           Y AG+S    N+++     S   L VRYLG+PLI K+L T+DC  L+E+++ R
Sbjct: 744 YLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKR 796


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 67.4 bits (163), Expect(2) = 2e-16
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
 Frame = -3

Query: 350 LPTQTIHDVEKLIKVYLWKGAVDGSYMPKVFWK*AVLKKEEGGFGIKDIYI*NIACVAKH 171
           LP + I +++K+   YLW G    +   K+ W      K+EGG G++ +   N     K 
Sbjct: 213 LPRECIREIDKMCSAYLWSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKEANDVSCLKL 272

Query: 170 I*NVCCNKEALWV---HTYGIK*QSIWGI-QSRSIYSWLWRKILHLKDKIKPYVKMQVRN 3
           I  +  + ++LWV   H   +K  S W + ++ S+ SW+W+K+L  +D      K +V N
Sbjct: 273 IWRIISHADSLWVKWIHATLLKQVSFWAVRENTSLGSWMWKKVLKFRDAAIQLCKAEVNN 332



 Score = 43.5 bits (101), Expect(2) = 2e-16
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = -2

Query: 540 YFAGVSDHQANDLSGILRISISGLLVRYLGIPLIIKQLCTSDCRGLIEKIK 388
           YFAG+S     ++      ++  L VRYLG+PL+ KQL ++D   LIE IK
Sbjct: 126 YFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIK 176