BLASTX nr result

ID: Lithospermum22_contig00013045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00013045
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   161   5e-38
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   160   1e-37
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   159   2e-37
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   159   3e-37
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...   157   7e-37

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  161 bits (408), Expect = 5e-38
 Identities = 75/170 (44%), Positives = 114/170 (67%)
 Frame = +2

Query: 17  GKYLGLPTSIGVSN*EVFKSVLDRIHTKVDN*KPRLFSKAGK*MFLTSVL*SIPTYTMQF 196
           G YLG+P  +G +  ++F+ V  ++  ++ N   R  S+AGK + L +V  SIPTY MQ 
Sbjct: 216 GIYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQL 275

Query: 197 LKLPTQVYKEIDTLLSNYWWGSDTKNKKIHWISWTTLCKSKEEGGLGFRKAQDFNNALLC 376
           L LP  + ++I+++++ ++W S+ + + I W+SW  +CK K++GGLGFRK  DFN ALL 
Sbjct: 276 LLLPKDLCRDIESMMNGFFWDSNPQCRSIRWMSWGKMCKQKKDGGLGFRKLXDFNLALLA 335

Query: 377 KQAWRLLTDPNSTLALTYKARYFPNGSFLTAELGTKPSYTWCSLLSIRDL 526
           KQ WR L +P+S +   ++ARYF N SFL AELG+ PSY W S+L+ + L
Sbjct: 336 KQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQGL 385


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/175 (44%), Positives = 113/175 (64%)
 Frame = +2

Query: 2    EVPTHGKYLGLPTSIGVSN*EVFKSVLDRIHTKVDN*KPRLFSKAGK*MFLTSVL*SIPT 181
            +V  H KYLG+P+  G S   +F S++DRI  K+   K +L S+AGK + L SV+ +IPT
Sbjct: 747  QVERHMKYLGIPSITGRSRTAIFDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPT 806

Query: 182  YTMQFLKLPTQVYKEIDTLLSNYWWGSDTKNKKIHWISWTTLCKSKEEGGLGFRKAQDFN 361
            Y M   KLP  + ++I + ++ +WWGS    ++IHW +W +LC  K  GG+GFR  + FN
Sbjct: 807  YLMGVYKLPCSIIQKIHSAMARFWWGSSDTQRRIHWKNWDSLCTLKCFGGMGFRDLRVFN 866

Query: 362  NALLCKQAWRLLTDPNSTLALTYKARYFPNGSFLTAELGTKPSYTWCSLLSIRDL 526
            +ALL +QAWRL+ +P+S LA   KA+Y+ N  FL A LG   SY+W S+ S + L
Sbjct: 867  DALLGRQAWRLVREPHSLLARVMKAKYYSNHDFLDAPLGVSTSYSWRSIWSSKAL 921


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  159 bits (402), Expect = 2e-37
 Identities = 74/170 (43%), Positives = 115/170 (67%)
 Frame = +2

Query: 17   GKYLGLPTSIGVSN*EVFKSVLDRIHTKVDN*KPRLFSKAGK*MFLTSVL*SIPTYTMQF 196
            G YLG+P  +G +  ++F+ V  ++  ++ N   R  S+AGK + L +V  SIPTY MQ 
Sbjct: 1303 GIYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQL 1362

Query: 197  LKLPTQVYKEIDTLLSNYWWGSDTKNKKIHWISWTTLCKSKEEGGLGFRKAQDFNNALLC 376
            L LP  + ++I+++++ ++W S+ + + I W+SW  +CK K++GGLGFRK +DFN ALL 
Sbjct: 1363 LLLPKDLCRDIESMMNXFFWDSNPQXRSIRWMSWXKMCKQKKDGGLGFRKLEDFNLALLA 1422

Query: 377  KQAWRLLTDPNSTLALTYKARYFPNGSFLTAELGTKPSYTWCSLLSIRDL 526
            KQ  R L + +S + + ++ARYF N SFL AELG+ PSY W S+L+ +DL
Sbjct: 1423 KQGXRFLQNLDSLVTIIFQARYFRNSSFLNAELGSNPSYMWRSILAAQDL 1472


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  159 bits (401), Expect = 3e-37
 Identities = 77/175 (44%), Positives = 109/175 (62%)
 Frame = +2

Query: 2    EVPTHGKYLGLPTSIGVSN*EVFKSVLDRIHTKVDN*KPRLFSKAGK*MFLTSVL*SIPT 181
            +V  H KYLG+P+  G S   +F S++DRI  K+   K +L S+AGK + L SV+ +IPT
Sbjct: 747  QVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPT 806

Query: 182  YTMQFLKLPTQVYKEIDTLLSNYWWGSDTKNKKIHWISWTTLCKSKEEGGLGFRKAQDFN 361
            Y M   K P  + ++I + ++ +WWGS    +KIHW +W ++C  K  GG+GF+    FN
Sbjct: 807  YLMGVYKFPVFIIQKIQSAMARFWWGSSDTQRKIHWKNWDSMCNLKCFGGMGFKDLTIFN 866

Query: 362  NALLCKQAWRLLTDPNSTLALTYKARYFPNGSFLTAELGTKPSYTWCSLLSIRDL 526
            +ALL +QAWRL  +P S L    KA+YFPN  FL A LG   SY+W S+ S + L
Sbjct: 867  DALLGRQAWRLTREPQSLLGRVMKAKYFPNCDFLNAPLGHSSSYSWSSIWSSKAL 921


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  157 bits (398), Expect = 7e-37
 Identities = 76/166 (45%), Positives = 106/166 (63%)
 Frame = +2

Query: 29  GLPTSIGVSN*EVFKSVLDRIHTKVDN*KPRLFSKAGK*MFLTSVL*SIPTYTMQFLKLP 208
           GLP  +G S   V   V +R+ T+++  K +  S AG+ + + SV  +IPTY M   +LP
Sbjct: 1   GLPYCVGHSKRAVLGFVKERVWTRLNGWKEKFLSVAGREVLIKSVAQAIPTYIMSCFRLP 60

Query: 209 TQVYKEIDTLLSNYWWGSDTKNKKIHWISWTTLCKSKEEGGLGFRKAQDFNNALLCKQAW 388
             V  EI++++ N+WW    + +KIHW SW  LCKSK +GG+GFR  Q FN+ALL KQ W
Sbjct: 61  DGVCHEIESMVCNFWWXQKEETRKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCW 120

Query: 389 RLLTDPNSTLALTYKARYFPNGSFLTAELGTKPSYTWCSLLSIRDL 526
           RL+  P S +A  +KARYFP  SFL A +G+ PS+TW S++  R L
Sbjct: 121 RLVQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIVGSRSL 166


Top