BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012986
         (1673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi...   541   e-151
ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi...   540   e-151
ref|XP_002522032.1| pentatricopeptide repeat-containing protein,...   505   e-140
ref|NP_197340.1| pentatricopeptide repeat-containing protein [Ar...   503   e-140
ref|XP_002871814.1| pentatricopeptide repeat-containing protein ...   503   e-140

>ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
            mitochondrial [Vitis vinifera]
            gi|296085168|emb|CBI28663.3| unnamed protein product
            [Vitis vinifera]
          Length = 454

 Score =  541 bits (1394), Expect = e-151
 Identities = 257/365 (70%), Positives = 308/365 (84%), Gaps = 1/365 (0%)
 Frame = +1

Query: 4    RFFNWARTNHPHYDPTTLEFEELLKILAQASNWETMWKVVHQMKDQNLPISTPVVSFIIE 183
            RFFNWAR+ H  Y PTTLE+EELLK LA+   ++ MWK+ HQM+     +S  VVS IIE
Sbjct: 95   RFFNWARS-HLSYQPTTLEYEELLKTLARTKQFQPMWKIAHQMQT----LSPTVVSSIIE 149

Query: 184  HYGKKGLINQAVELFNRLKN-LNCPQTIETYNSLLFSLCEVKNFQGAYSLIRRMIRKNLT 360
             +GK GL++QAVE+FN+ K+ LNCPQTIE YNSLLF+LCEVK F GAY+LIRRMIRK +T
Sbjct: 150  EFGKHGLVDQAVEVFNKAKSALNCPQTIEVYNSLLFALCEVKYFHGAYALIRRMIRKGVT 209

Query: 361  PNKRTYSILVTAWCSGGKMKEAQEFLEEMSRRGFNPPVRGRDLLVDGLLNAGYLESAKGL 540
            PNK+TYS+LV  WC+ GKMKEAQ+FLEEMSR+GFNPPVRGRDLLVDGLLNAGYLE+AK +
Sbjct: 210  PNKQTYSVLVNGWCAAGKMKEAQDFLEEMSRKGFNPPVRGRDLLVDGLLNAGYLEAAKEM 269

Query: 541  VRKMTKQGFVPDVCTFNSLAEAVCKTGELDFCIDLFNDVCRLGLCPDIETYKIIVNAASK 720
            VRKMTK+G  PDV T NS+ EA+CK GE +FCID++NDVCRLG+ P++ TYKI++ AA K
Sbjct: 270  VRKMTKEGCAPDVETLNSMLEAICKAGEAEFCIDIYNDVCRLGVSPNVGTYKIMIPAACK 329

Query: 721  AGRVNEALEVLHRSTEDGHRPFPSLYAPILKTLCKQGQFDDSLSFFIDMKMKGHPPNRPI 900
             GR++EA  +LHRS EDGHRPFPSLYAPI+K LC+ GQFDD+  FF DMK+KGHPPNRP+
Sbjct: 330  EGRIDEAFRILHRSIEDGHRPFPSLYAPIIKALCRNGQFDDAFCFFSDMKVKGHPPNRPV 389

Query: 901  YTMLIKLFARGGRYVEAANYLIEMTELSLLPTPQSFDMVTDGLKNCGKHDLAKKIEQLEV 1080
            YTMLI +  RGGR+V+AANYL+EMTEL+L P  + FDMVTDGLKNCGKHDLA+KIEQLEV
Sbjct: 390  YTMLITMCGRGGRFVDAANYLVEMTELNLTPISRCFDMVTDGLKNCGKHDLARKIEQLEV 449

Query: 1081 SLRGI 1095
            SLRG+
Sbjct: 450  SLRGV 454


>ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
            mitochondrial-like [Cucumis sativus]
            gi|449518358|ref|XP_004166209.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g18390,
            mitochondrial-like [Cucumis sativus]
          Length = 455

 Score =  540 bits (1392), Expect = e-151
 Identities = 253/366 (69%), Positives = 308/366 (84%), Gaps = 1/366 (0%)
 Frame = +1

Query: 1    FRFFNWARTNHPHYDPTTLEFEELLKILAQASNWETMWKVVHQMKDQNLPISTPVVSFII 180
            FRFFNWA +++P Y PTTLEFEEL+K LA+   + TMWKV+ QMK QNL IS   +SFII
Sbjct: 90   FRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISFII 149

Query: 181  EHYGKKGLINQAVELFNRL-KNLNCPQTIETYNSLLFSLCEVKNFQGAYSLIRRMIRKNL 357
            + YGK+GL++ AV +FN+  K+++CPQT+E YN+LLF+LCEVK F GAY+LIRRMIRK +
Sbjct: 150  QEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGV 209

Query: 358  TPNKRTYSILVTAWCSGGKMKEAQEFLEEMSRRGFNPPVRGRDLLVDGLLNAGYLESAKG 537
            TP+K+TY  LVT WCS GKMKEAQEFLEEMS++GFNPP+RGRDLLV+GLLNAGYLESAK 
Sbjct: 210  TPDKKTYGTLVTGWCSAGKMKEAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKD 269

Query: 538  LVRKMTKQGFVPDVCTFNSLAEAVCKTGELDFCIDLFNDVCRLGLCPDIETYKIIVNAAS 717
            +VRKMTK+G VPD+ TFNSL + +C +GE+DFCI++F++VC+LGLCPDI TYKI++ A S
Sbjct: 270  MVRKMTKEGSVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATS 329

Query: 718  KAGRVNEALEVLHRSTEDGHRPFPSLYAPILKTLCKQGQFDDSLSFFIDMKMKGHPPNRP 897
            K GR++EA  +LH   EDGH PFPSLY PILK +CK+GQFDD+  FF DMK KGHPPNRP
Sbjct: 330  KVGRIDEAFRLLHCCIEDGHVPFPSLYGPILKGMCKRGQFDDAFCFFGDMKHKGHPPNRP 389

Query: 898  IYTMLIKLFARGGRYVEAANYLIEMTELSLLPTPQSFDMVTDGLKNCGKHDLAKKIEQLE 1077
            +YTMLI +  RGGR+V+AANYL+EM EL L P  + FDMVTDGLKNCGKHDLAKKIEQLE
Sbjct: 390  VYTMLITMCGRGGRFVDAANYLMEMAELGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLE 449

Query: 1078 VSLRGI 1095
            VS+RGI
Sbjct: 450  VSIRGI 455


>ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538836|gb|EEF40436.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 451

 Score =  505 bits (1300), Expect = e-140
 Identities = 233/363 (64%), Positives = 298/363 (82%), Gaps = 2/363 (0%)
 Frame = +1

Query: 4    RFFNWARTNHPHYDPTTLEFEELLKILAQASNWETMWKVVHQMKDQN--LPISTPVVSFI 177
            RFFNW+R    +Y PT++E+EEL+KILA++  + +MWK++ QMKDQN    IS+  V  I
Sbjct: 89   RFFNWSRA---YYTPTSIEYEELIKILAKSKRYSSMWKLITQMKDQNPQFSISSETVRSI 145

Query: 178  IEHYGKKGLINQAVELFNRLKNLNCPQTIETYNSLLFSLCEVKNFQGAYSLIRRMIRKNL 357
            IE YG+ GLI+QAVE+FN+  +LNC Q ++ YNSLLF+LCEVK F GAY+L+RR+IRK L
Sbjct: 146  IEEYGRSGLIDQAVEVFNQCNSLNCEQNVDIYNSLLFALCEVKLFHGAYALVRRLIRKGL 205

Query: 358  TPNKRTYSILVTAWCSGGKMKEAQEFLEEMSRRGFNPPVRGRDLLVDGLLNAGYLESAKG 537
             PNK TYS+LV  WCS GK KEAQ FLEEMS++GFNPPVRGRDLL++GLLNAGY ESAK 
Sbjct: 206  APNKTTYSVLVNGWCSNGKFKEAQLFLEEMSKKGFNPPVRGRDLLIEGLLNAGYFESAKE 265

Query: 538  LVRKMTKQGFVPDVCTFNSLAEAVCKTGELDFCIDLFNDVCRLGLCPDIETYKIIVNAAS 717
            +V KM+K+GFVPDV TFN L EA+C +GE+DFC+D++  + +LG CPDI +YKI++ A S
Sbjct: 266  MVFKMSKEGFVPDVNTFNCLIEAICNSGEVDFCVDMYYSLRKLGFCPDINSYKILIPAVS 325

Query: 718  KAGRVNEALEVLHRSTEDGHRPFPSLYAPILKTLCKQGQFDDSLSFFIDMKMKGHPPNRP 897
            K G+++EA ++L+ S EDGH+PFP LYAPI+K +C++GQFDD+  FF +MK+KGHPPNRP
Sbjct: 326  KVGKIDEAFKLLNNSIEDGHKPFPGLYAPIIKGMCRRGQFDDAFCFFGEMKVKGHPPNRP 385

Query: 898  IYTMLIKLFARGGRYVEAANYLIEMTELSLLPTPQSFDMVTDGLKNCGKHDLAKKIEQLE 1077
            +YTMLI +  RGG+YVEAANYL+EMTE+ L P  + FDMVTDGLKNCGKHDLAK+IEQLE
Sbjct: 386  VYTMLITMCGRGGKYVEAANYLVEMTEMGLTPISRCFDMVTDGLKNCGKHDLAKRIEQLE 445

Query: 1078 VSL 1086
            VS+
Sbjct: 446  VSV 448


>ref|NP_197340.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|223635760|sp|Q94JX6.2|PP391_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g18390, mitochondrial; Flags: Precursor
            gi|332005166|gb|AED92549.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 459

 Score =  503 bits (1295), Expect = e-140
 Identities = 237/365 (64%), Positives = 295/365 (80%), Gaps = 1/365 (0%)
 Frame = +1

Query: 4    RFFNWARTNHPHYDPTTLEFEELLKILAQASNWETMWKVVHQMKDQNLPISTPVVSFIIE 183
            RFFNWAR+N P Y PT++E+EEL K LA    +E+MWK++ QMKD +L IS   + FIIE
Sbjct: 96   RFFNWARSN-PSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIE 154

Query: 184  HYGKKGLINQAVELFNRL-KNLNCPQTIETYNSLLFSLCEVKNFQGAYSLIRRMIRKNLT 360
             YGK G ++QAVELFN + K L C QT++ YNSLL +LC+VK F GAY+LIRRMIRK L 
Sbjct: 155  QYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLK 214

Query: 361  PNKRTYSILVTAWCSGGKMKEAQEFLEEMSRRGFNPPVRGRDLLVDGLLNAGYLESAKGL 540
            P+KRTY+ILV  WCS GKMKEAQEFL+EMSRRGFNPP RGRDLL++GLLNAGYLESAK +
Sbjct: 215  PDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEM 274

Query: 541  VRKMTKQGFVPDVCTFNSLAEAVCKTGELDFCIDLFNDVCRLGLCPDIETYKIIVNAASK 720
            V KMTK GFVPD+ TFN L EA+ K+GE++FCI+++   C+LGLC DI+TYK ++ A SK
Sbjct: 275  VSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSK 334

Query: 721  AGRVNEALEVLHRSTEDGHRPFPSLYAPILKTLCKQGQFDDSLSFFIDMKMKGHPPNRPI 900
             G+++EA  +L+   EDGH+PFPSLYAPI+K +C+ G FDD+ SFF DMK+K HPPNRP+
Sbjct: 335  IGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPV 394

Query: 901  YTMLIKLFARGGRYVEAANYLIEMTELSLLPTPQSFDMVTDGLKNCGKHDLAKKIEQLEV 1080
            YTMLI +  RGG++V+AANYL+EMTE+ L+P  + FDMVTDGLKN GKHDLA +IEQLEV
Sbjct: 395  YTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQLEV 454

Query: 1081 SLRGI 1095
             LRG+
Sbjct: 455  QLRGV 459


>ref|XP_002871814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297317651|gb|EFH48073.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 459

 Score =  503 bits (1295), Expect = e-140
 Identities = 235/365 (64%), Positives = 296/365 (81%), Gaps = 1/365 (0%)
 Frame = +1

Query: 4    RFFNWARTNHPHYDPTTLEFEELLKILAQASNWETMWKVVHQMKDQNLPISTPVVSFIIE 183
            RFFNWAR+N P Y PT++E+EEL K LA    +E+MWK++ QMKD +L IS   + FIIE
Sbjct: 96   RFFNWARSN-PSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIE 154

Query: 184  HYGKKGLINQAVELFNRL-KNLNCPQTIETYNSLLFSLCEVKNFQGAYSLIRRMIRKNLT 360
             YGK G ++QAVELFN + K L C QT++ YN+LL +LC+VK F GAY+LIRRMIRK L 
Sbjct: 155  QYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNALLHALCDVKMFHGAYALIRRMIRKGLK 214

Query: 361  PNKRTYSILVTAWCSGGKMKEAQEFLEEMSRRGFNPPVRGRDLLVDGLLNAGYLESAKGL 540
            P+KRTY+ILV  WCS GKMKEAQEFL+EMSR+GFNPP RGRDLL++GLLNAGYLESAK +
Sbjct: 215  PDKRTYAILVNGWCSAGKMKEAQEFLDEMSRKGFNPPARGRDLLIEGLLNAGYLESAKEI 274

Query: 541  VRKMTKQGFVPDVCTFNSLAEAVCKTGELDFCIDLFNDVCRLGLCPDIETYKIIVNAASK 720
            V KMTK GFVPD+ TFN+L EA+ K+GE++FCI+++   C+LGLC DI+TYK ++ A SK
Sbjct: 275  VDKMTKGGFVPDILTFNTLIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSK 334

Query: 721  AGRVNEALEVLHRSTEDGHRPFPSLYAPILKTLCKQGQFDDSLSFFIDMKMKGHPPNRPI 900
             G+++EA  +L+   EDGH+PFPSLYAPI+K +C+ G FDD+ SFF DMK+K HPPNRP+
Sbjct: 335  IGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPV 394

Query: 901  YTMLIKLFARGGRYVEAANYLIEMTELSLLPTPQSFDMVTDGLKNCGKHDLAKKIEQLEV 1080
            YTMLI +  RGG++V+AANYL+EMTE+ L+P  + FDMVTDGLKN GKHDLA +IEQLEV
Sbjct: 395  YTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNSGKHDLAMRIEQLEV 454

Query: 1081 SLRGI 1095
             LRG+
Sbjct: 455  QLRGV 459