BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012934
         (4549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...  1882   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...  1753   0.0  
ref|XP_002300065.1| predicted protein [Populus trichocarpa] gi|2...  1750   0.0  
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab...  1749   0.0  
ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana...  1739   0.0  

>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score = 1882 bits (4875), Expect = 0.0
 Identities = 958/1408 (68%), Positives = 1144/1408 (81%), Gaps = 2/1408 (0%)
 Frame = +3

Query: 96   IQFTKQPYIEDVGPRKIESIQFSLFNEADILKASEVEVYLGSYYDSAKKPIPNGLLDSRM 275
            IQFTK+PYIEDVGPRKIESI+F+LF+E++I KA+EV+V+ G YYD+ +KPI NGLLD RM
Sbjct: 5    IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64

Query: 276  GPPNKHGVCTTCQGSFQQCPGHYGYLNLSLPVYHAGYLTTVVNILKCICKQCSRILLVEK 455
            GP NK+G C TC G+F+ CPGH GYL L+LPVY+ GYL+T+V+ILKCICK CSR+LL EK
Sbjct: 65   GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124

Query: 456  ERLDMLKKMRSLKLDPFRKNEILKRVIKRCNSMVAMQRREMTCSRCGYINGVVKKATKGP 635
               D LKKMRS K++  +K E++K+++++C +M A  ++ + CSRCGY+NG+VKKA    
Sbjct: 125  ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAM-ASSKKAVKCSRCGYMNGIVKKAVS-V 182

Query: 636  LGVIYDRSNI-DNFIEECKSAISHSKESKGSVNCSSLLDPKVVHTLFKNMLDEDCELLYL 812
            LG+I+DRS I D  +EEC SAISH+KESK S +   +L+P  V +LFK M+DEDC+LL L
Sbjct: 183  LGIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNL 242

Query: 813  NDRPDKLIITSISVPPTVIRPSVLVDGGTQSNENDITERLKCIIRANATVRQELTETNPL 992
             +RP+KL++T+I VPP  IRPSV +DGGTQSNEND+TERLK II+ANA++ QEL +T   
Sbjct: 243  AERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGST 302

Query: 993  NKSLASWVDLQTEVAQYINSDIRVAQSSMPAAKPLSGFIQRLKGKQGRFRSNLSGKRSEY 1172
            +K LA W  LQ EVAQYINSD+R    +M AA+PLSGF+QRLKGKQGRFR NLSGKR EY
Sbjct: 303  SKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362

Query: 1173 TGRTVISPDPNLKITEVAIPILMAQILTYPEIVSRHNIEKLRQCVRNGPDKYPGAKLIKQ 1352
            TGRTVISPDPNLKITEVAIPILMA+IL+YPE VS HNIEKLRQC+ NGP KYPGAKLI+ 
Sbjct: 363  TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422

Query: 1353 TDGSDISLQYASRKRCADDLIYGYTVERHLQDGDIVLFNRQPSLHRMSMMSHRARIMPWR 1532
             DGS  SL ++ RKR AD+L YGY VERHL+DGD+VLFNRQPSLHRMS+M HRARIMPWR
Sbjct: 423  PDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 482

Query: 1533 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1712
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD
Sbjct: 483  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 542

Query: 1713 FLTSSFLITRKDTFYDRASFSLMCSYMGDAMDRVDLPTPALVKPVELWTGKQLFSVLIRP 1892
            FLTSSFLITRKDTFYDRA+FSLMCSYMGD MD VDLPTPA++KPVELWTGKQLF+VL+RP
Sbjct: 543  FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRP 602

Query: 1893 HAKMRVYVSLTVKEKNYDKSKNPGPETLCQKDGFVYFRNSELISGQVGKVTLGNGNKDGL 2072
            HA +RVY++LTV EK Y+K +  G ET+C  DGFVYFRNSELISGQ+GK TLGNGNKDGL
Sbjct: 603  HANVRVYLNLTVMEKTYNKRR--GKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGL 660

Query: 2073 YAILLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGETLSGTKEQIVQAGYGK 2252
            +++LLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPG  L+  K + ++ GY  
Sbjct: 661  FSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYEN 720

Query: 2253 ADDLINKFNRGELQSLPGLDASQTLESEISNELNEIRENTGKECMSSLHWRNSPLIMSQC 2432
              +LI ++N+G+L+  PG +A+QTLE+EI+  LN+IRE T   CM  LHWRNSPLIMSQC
Sbjct: 721  CHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQC 780

Query: 2433 GSKGSPINISQMVACVGQQIVGGHRAPNGFIDRSLPHFPKYSRTPSAKGFVQNSFYTGLS 2612
            GSKGSPINISQM+ACVGQQ VGG RAP+GFIDR+LPHFP+ S+TP AKGFV +SFYTGL+
Sbjct: 781  GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLT 840

Query: 2613 AVEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKTLEDLYIHYDNTVRNASSCIIQFMYG 2792
            A EFFFHTMGGREGLVDTAVKTADTGYMSRRLMK LEDL I YD TVRNA+  I+QF+YG
Sbjct: 841  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYG 900

Query: 2793 DDGMDPSQMEAKDGQPLNFDRLLMKAKATCPAIEQKSMSTDEIYQKTLEVLVDHGIVSEG 2972
            DDGMDP++ME KDG PLNF+RL +K KATCPA E  S+S  +I ++T++ L +H   +EG
Sbjct: 901  DDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQI-EETVKRLKEHNTSAEG 959

Query: 2973 EENNKVPQLAEQKSFGQSLLEFVCKKMKSLEETQKRLKLDGEEDADACLESDENVALNAS 3152
              +          +F  +L  F+ +  +  + T++ L L GE   +  L+  E  A N S
Sbjct: 960  CSD----------AFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNIS 1009

Query: 3153 GLTSKQLEVFLRTCLARYNSKKIESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVT 3332
            G+TSKQL+VFL TC++RY  K+IE+GTAIGAIGA SIGEPGTQMTLKTFHFAGVASMNVT
Sbjct: 1010 GITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 1069

Query: 3333 LGVPRIKEIIDASKDIKTPIIDAKLERNNDDAKSAIVVKGRIEKTLLGQVAKSVKIVMSS 3512
            LGVPRIKEII+ +K I TPII A LE NN + K+A +VKGRIE+T LGQVAKS+KIV++S
Sbjct: 1070 LGVPRIKEIINGAKRISTPIITAALECNN-NVKTARMVKGRIERTTLGQVAKSIKIVLTS 1128

Query: 3513 RRASIVVTLDMKVIQASLLSIDAYSVKQSILQTXXXXXXXXXXXXXXXXXXXQVKVLNTS 3692
            R A I V LDM+ IQAS LSID+  V++SIL+                     +KVL+  
Sbjct: 1129 RLALIAVALDMEGIQASQLSIDSNIVRESILRN-----------RRIKLKQQHIKVLDAG 1177

Query: 3693 KLEVIPFVDKKNLHFELHSLKNRLPTVVVKGINTVERVVISNEKEHKERCQLFVEGTGLL 3872
            KLEV P  D+  +HFELH+LKN LPTVVVKGI TVER VI+  K++K +  L VEGTGL 
Sbjct: 1178 KLEVHPQGDRSTIHFELHALKNLLPTVVVKGIETVERAVIN--KDNKVKYNLLVEGTGLQ 1235

Query: 3873 AVMGTEGIDGSKTISNNIQEVYRTLGIEVARRLIIDEIKKIVEAYGITIDIRHMMLLAEI 4052
             VMGTEG+ G +T SN+I EV +TLGIE AR+ II+EI+  + ++G++IDIRHMMLLA++
Sbjct: 1236 TVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADL 1295

Query: 4053 MTYKGEILGITRFGMQKMKESVLMLASFEKTADHLFNASVNGRVDKIEGVSECIIMGIPM 4232
            MT++GE+LGITRFG+QKM +SVLMLASFEKTADHLFNASV+GR DKIEGVSECIIMGIPM
Sbjct: 1296 MTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPM 1355

Query: 4233 QFGTGLLKVRQSMPPV-ELKYGPDPIIS 4313
            Q GTG+LKVRQ +  V EL YG DPIIS
Sbjct: 1356 QLGTGILKVRQRLQQVPELSYGLDPIIS 1383


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score = 1753 bits (4541), Expect = 0.0
 Identities = 916/1429 (64%), Positives = 1099/1429 (76%), Gaps = 17/1429 (1%)
 Frame = +3

Query: 78   RKSPQQIQFTKQPYIEDVGPRKIESIQFSLFNEADILKASEVEVYLGSYYDSAKKPIPNG 257
            R   + + FTKQPYIEDVGPRKI+S+QF+ F+ A+I K +EV+VY G YYD+ +KPI  G
Sbjct: 3    RAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGG 62

Query: 258  LLDSRMGPPNKHGVCTTCQGSFQQCPGHYGYLNLSLPVYHAGYLTTVVNILKCICKQCSR 437
            LLD RMGP NK   C TC  +F  CPGHYGY+NL+LPV++ GY TT++ ILKCICK CSR
Sbjct: 63   LLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSR 122

Query: 438  ILLVEKERLDMLKKMRSLKLDPFRKNEILKRVIKRCNSMVAMQRREMTCSRCGYINGVVK 617
            ILL EK   D L+KMR+ KL+  RK +++K++IK+C+++     +   CSRCGY+NG VK
Sbjct: 123  ILLEEKLFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTT-GNKSTRCSRCGYLNGSVK 181

Query: 618  KATKGPLGVIYDRSNIDNFIEECKSAISHSKESKGSVNCSS-LLDPKVVHTLFKNMLDED 794
            KA    LG+++ R+         K A   S++ +   N S+ +L+P  V  LF+ M DED
Sbjct: 182  KAVS-MLGILHYRAR-------SKDAGVVSEDLRAPYNVSNDILNPFRVLCLFQRMSDED 233

Query: 795  CELLYLNDRPDKLIITSISVPPTVIRPSVLVDGGTQSNENDITERLKCIIRANATVRQEL 974
            CELL+L++RP+KLIIT++ VPP  IRPSV++DG +QSNENDITERLK II+ NA+V QEL
Sbjct: 234  CELLFLSNRPEKLIITNVLVPPIAIRPSVIMDG-SQSNENDITERLKRIIQQNASVSQEL 292

Query: 975  TETNPLNKSLASWVDLQTEVAQYINSDIRVAQSSMPAAKPLSGFIQRLKGKQGRFRSNLS 1154
            + +N   K L SW  LQ+EVAQ INSD+R    SM  +KPL+GF+QRLKGKQGRFR NL 
Sbjct: 293  STSNSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLC 352

Query: 1155 GKRSEYTGRTVISPDPNLKITEVAIPILMAQILTYPEIVSRHNIEKLRQCVRNGPDKYPG 1334
            GKR E+TGRTVISPDPNLKITEVA+PI MA+ILTYPE V+RHNIEKLRQCV NGPDKYPG
Sbjct: 353  GKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPG 412

Query: 1335 AKLIKQTDGSDISLQYASRKRCADDLIYGYTVERHLQDGDIVLFNRQPSLHRMSMMSHRA 1514
            A++++  DGS  SL  + RKR AD+L YG  VERHL+DGD+VLFNRQPSLHRMS+M HR 
Sbjct: 413  ARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRV 472

Query: 1515 RIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEIL 1694
            R+MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEIL
Sbjct: 473  RVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEIL 532

Query: 1695 VASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDAMDRVDLPTPALVKPVELWTGKQLF 1874
            VASTQDFLTSSFLITRKDTFYDRA+FSLMCSYMGD MD VDLPTPALVKP+ELWTGKQLF
Sbjct: 533  VASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLF 592

Query: 1875 SVLIRPHAKMRVYVSLTVKEKNYDKSK--NPGPETLCQKDGFVYFRNSELISGQVGKVTL 2048
            SVL+RPHA M+VY++LTVKEK+Y K K      ET+C  DGFVYFRNSELISGQVGK TL
Sbjct: 593  SVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATL 652

Query: 2049 GNGNKDGLYAILLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGETLSGTKEQ 2228
            GNGNKDGLY++LLRDY AHAAA CMNRLAKLSARWIGNHGFSIGIDDVQPG+ L   K+ 
Sbjct: 653  GNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQT 712

Query: 2229 IVQAGYGKADDLINKFNRGELQSLPGLDASQTLESEISNELNEIRENTGKECMSSLHWRN 2408
             +  GY   D  IN FN G L    G DA+Q+LES+I+  LN IRE T   CM +LHWRN
Sbjct: 713  TILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRN 772

Query: 2409 SPLIMSQCGSKGSPINISQMVACVGQQIVGGHRAPNGFIDRSLPHFPKYSRTPSAKGFVQ 2588
            SPLIMSQCGSKGSPINISQMVACVGQQ VGG RAP+GFIDRSLPHF + ++TP+AKGFV 
Sbjct: 773  SPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVA 832

Query: 2589 NSFYTGLSAVEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKTLEDLYIHYDNTVRNASS 2768
            NSFY+GL+A EFFFHTMGGREGLVDTAVKTADTGYMSRRL+K LEDL IHYD++VRNA  
Sbjct: 833  NSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGG 892

Query: 2769 CIIQFMYGDDGMDPSQMEAKDGQPLNFDRLLMKAKATCPAIEQKSMSTDEIYQKTLEVLV 2948
            CI+QF YGDDGMDP+QME K G PLNF+RL +KAKATCP+   K +S  E + +T+E   
Sbjct: 893  CIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSE-FSETVE--- 948

Query: 2949 DHGIVSEGEENNKVPQLAEQKSFGQSLLEFVCKKMKSLEETQKRLKLDGEEDAD-ACLES 3125
                     +++  P+     +F  SL  F+ K +++ +++   L  D E   D + + S
Sbjct: 949  -----DRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISS 1003

Query: 3126 DEN--------VALNASGLTSKQLEVFLRTCLARYNSKKIESGTAIGAIGAQSIGEPGTQ 3281
             +N        V  N +G+T +QL+VFL TCL+RY++KKIE+GTAIGAIGAQSIGEPGTQ
Sbjct: 1004 SDNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQ 1063

Query: 3282 MTLKTFHFAGVASMNVTLGVPRIKEIIDASKDIKTPIIDAKLERNNDDAKSAIVVKGRIE 3461
            MTLKTFHFAGVASMNVTLGVPRIKEII+ +K I TPI+ A L  ++D+   A +VK RIE
Sbjct: 1064 MTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAAL-THDDNVNIARMVKARIE 1122

Query: 3462 KTLLGQVAKSVKIVMSSRRASIVVTLDMKVIQASLLSIDAYSVKQSILQTXXXXXXXXXX 3641
            KT LGQ+AK ++IVMSSR A I + LDM+ I+ + L +DA  VKQ+IL T          
Sbjct: 1123 KTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVT---------- 1172

Query: 3642 XXXXXXXXXQVKVLNTSKLEVIP-FVDKKNLHFELHSLKNRLPTVVVKGINTVERVVISN 3818
                      + VL+  KL V+P   D+  LHF LH LKN LP VVVKGI TV R VI  
Sbjct: 1173 -PKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKE 1231

Query: 3819 EKE---HKERCQLFVEGTGLLAVMGTEGIDGSKTISNNIQEVYRTLGIEVARRLIIDEIK 3989
            EK+   + ++  L VEGTGL AVMGTEG+DG  T SN+I EV + LGIE AR+ II+EIK
Sbjct: 1232 EKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIK 1291

Query: 3990 KIVEAYGITIDIRHMMLLAEIMTYKGEILGITRFGMQKMKESVLMLASFEKTADHLFNAS 4169
              +E++G++IDIRHMMLL ++MT++GE+LGITRFG+QKM +SVLMLASFEKTADHLFNAS
Sbjct: 1292 YTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNAS 1351

Query: 4170 VNGRVDKIEGVSECIIMGIPMQFGTGLLKVRQSMP-PVELKYGPDPIIS 4313
            VNGR DKIEGVSEC+IMGIPM  GTG+LKVRQ +  P +L YGP  I+S
Sbjct: 1352 VNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRVSVPQQLPYGPPAILS 1400


>ref|XP_002300065.1| predicted protein [Populus trichocarpa] gi|222847323|gb|EEE84870.1|
            predicted protein [Populus trichocarpa]
          Length = 1394

 Score = 1750 bits (4532), Expect = 0.0
 Identities = 906/1419 (63%), Positives = 1089/1419 (76%), Gaps = 22/1419 (1%)
 Frame = +3

Query: 75   MRKSPQQIQFTKQPYIEDVGPRKIESIQFSLFNEADILKASEVEVYLGSYYDSAKKPIPN 254
            M++  Q I +TKQPYIEDVGPR+I+SIQFS  + +DILKASE +V+LG YYD+ KK I  
Sbjct: 1    MQQRAQDIIYTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVG 60

Query: 255  GLLDSRMGPPNKHGVCTTCQGSFQQCPGHYGYLNLSLPVYHAGYLTTVVNILKCICKQCS 434
            GLLD+RMG PNKHG C TC GSF  CPGH+GYLNL LPVY+ GYL+T+++ILKCICK CS
Sbjct: 61   GLLDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCS 120

Query: 435  RILLVEKERLDMLKKMRSLKLDPFRKNEILKRVIKRCNSMVAMQRREMTCSRCGYINGVV 614
            R+L+ EK R   LK+MR+ + +P +KNE++K ++K+C+SM +   + + C RCGY+NG+V
Sbjct: 121  RVLVDEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASS--KAVKCLRCGYMNGMV 178

Query: 615  KKATKGPLGVIYDRSN-IDNFIEECKSAISHSKESKGSVNCSS-LLDPKVVHTLFKNMLD 788
            KKA    +G+I+DRS  ID ++EECKSAI H++E++  +  ++ +L+P  V +LF+ M++
Sbjct: 179  KKAGS-VVGIIHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVE 237

Query: 789  EDCELLYLNDRPDKLIITSISVPPTVIRPSVLVDGGTQSNENDITERLKCIIRANATVRQ 968
            EDCELLYL  RP+KLIIT+I+VPP  IRPSV  +G +QSNENDITERLK II+ NA +R 
Sbjct: 238  EDCELLYLQGRPEKLIITTIAVPPISIRPSVFTEG-SQSNENDITERLKQIIQFNAKLRL 296

Query: 969  ELTETNPLN-KSLASWVDLQTEVAQYINSDIRVAQSSMPAAKPLSGFIQRLKGKQGRFRS 1145
            EL E      K L  W +LQ  V  YINSD+R+    M   +PLSGF+QRL GKQGRFR 
Sbjct: 297  ELLEGRRTGIKYLIGWDELQAVVTLYINSDVRIPLD-MQVGRPLSGFVQRLTGKQGRFRQ 355

Query: 1146 NLSGKRSEYTGRTVISPDPNLKITEVAIPILMAQILTYPEIVSRHNIEKLRQCVRNGPDK 1325
            NL+GKR E+TGRTVISPDPNLKITEVAIPI MA+ILTYPE V+ HNIEKLRQCV NG  K
Sbjct: 356  NLAGKRVEFTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYK 415

Query: 1326 YPGAKLIKQTDGSDISLQYASRKRCADDLIYGYTVERHLQDGDIVLFNRQPSLHRMSMMS 1505
            YPGA+++   DGS   L    RKR A++L  G  V RHL+DGD+VLFNRQPSLHRMS+M 
Sbjct: 416  YPGARMVTYPDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMC 475

Query: 1506 HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 1685
            HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA +LMGVQNNLCTPKNG
Sbjct: 476  HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNG 535

Query: 1686 EILVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDAMDRVDLPTPALVKPVELWTGK 1865
            EILVASTQDFLTSSFLITRKDTFYDRA+FSLMCSYM D MD VDLPTP+++KP+ELWTGK
Sbjct: 536  EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGK 595

Query: 1866 QLFSVLIRPHAKMRVYVSLTVKEKNY---DKSKNPGPETLCQKDGFVYFRNSELISGQVG 2036
            QLFSVL+RPHA +RVYV+L +KEKNY   +K      ET+C  DG+VYFRNSELISGQ+G
Sbjct: 596  QLFSVLLRPHANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLG 655

Query: 2037 KVTLGNGNKDGLYAILLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGETLSG 2216
            K TLGNGNKDGLY+ILLRDYNA+AAA CMNRLAKLSARWIGNHGFSIGIDDVQPG+ L  
Sbjct: 656  KATLGNGNKDGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLID 715

Query: 2217 TKEQIVQAGYGKADDLINKFNRGELQSLPGLDASQTLESEISNELNEIRENTGKECMSSL 2396
             K + +  GY   + LI  +N G L    G DA+QTLE+EI+  LN++RE  G  CM  L
Sbjct: 716  EKGKTISNGYRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKEL 775

Query: 2397 HWRNSPLIMSQCGSKGSPINISQMVACVGQQIVGGHRAPNGFIDRSLPHFPKYSRTPSAK 2576
            HWRNSPLIMSQCGSKGSPINISQM+ACVGQQ VGG RAP+GFIDRSLPHFP+ S+TP+AK
Sbjct: 776  HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAK 835

Query: 2577 GFVQNSFYTGLSAVEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKTLEDLYIHYDNTVR 2756
            GFV NSFY+GLSA EFFFHTMGGREGLVDTAVKTADTGYM+RRL K LEDL + YDNTV+
Sbjct: 836  GFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQ 895

Query: 2757 NASSCIIQFMYGDDGMDPSQMEAKDGQPLNFDRLLMKAKATCPAIEQKSMSTDEIYQKTL 2936
            +A   I+QF+YGDDG+DP+ ME K G PLNFDRL MK KATC A E + +S  +I     
Sbjct: 896  DAGGGIVQFLYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIVQ 955

Query: 2937 EVLVDHGIVSEGEENNKVPQLAEQKSFGQSLLEFVCKKMKSLE---------ETQKRLKL 3089
             +L+ H    +G            +SF +SL  F+  + K LE         E +    +
Sbjct: 956  SLLLKHNGTLDG---------ICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFENI 1006

Query: 3090 DGEEDADACLESDENVALNASGLTSKQLEVFLRTCLARYNSKKIESGTAIGAIGAQSIGE 3269
               E      ++ E +A   SG+T KQLEVFL+TCL RY  K+IE GTAIGAIGAQSIGE
Sbjct: 1007 KNVEGLTGISKNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIGE 1066

Query: 3270 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIIDASKDIKTPIIDAKLERNNDDAKSAIVVK 3449
            PGTQMTLKTFHFAGVASMN+T GVPRIKEII+ +K I TPII  +LE +N +  +A ++K
Sbjct: 1067 PGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVELE-HNSNVNAARIIK 1125

Query: 3450 GRIEKTLLGQVAKSVKIVMSSRRASIVVTLDMKVIQASLLSIDAYSVKQSILQTXXXXXX 3629
            GRI+KT+LGQVAKS+KIVM+SR AS+ VTLDMK I+ + LS+DA  V++ IL+T      
Sbjct: 1126 GRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRELILET------ 1179

Query: 3630 XXXXXXXXXXXXXQVKVLNTSKLEVIPFVDKKNLHFELHSLKNRLPTVVVKGINTVERVV 3809
                         ++ VL   KLEV P  D+  LHFELHSLKN LP VVVKGI TVERVV
Sbjct: 1180 -----PKIKRKLQRINVLEDGKLEVFPGGDRNKLHFELHSLKNMLPAVVVKGIKTVERVV 1234

Query: 3810 ISNEK-------EHKERCQLFVEGTGLLAVMGTEGIDGSKTISNNIQEVYRTLGIEVARR 3968
            I+ +K       +   +  +FVEG GL AVMGTEG+DG KT SN+I EV  TLGIE AR+
Sbjct: 1235 IAQKKLDDAENDQGGPKYNMFVEGMGLQAVMGTEGVDGRKTKSNHIIEVQETLGIEAARK 1294

Query: 3969 LIIDEIKKIVEAYGITIDIRHMMLLAEIMTYKGEILGITRFGMQKMKESVLMLASFEKTA 4148
             IIDEIK  +E++G++IDIRHMMLLA++MT +G +LGITRFG+QKM +SVLMLASFEKT+
Sbjct: 1295 CIIDEIKGTMESHGMSIDIRHMMLLADVMTSRGVVLGITRFGIQKMDKSVLMLASFEKTS 1354

Query: 4149 DHLFNASVNGRVDKIEGVSECIIMGIPMQFGTGLLKVRQ 4265
            DHLFNASV G+ DKIEGVSECIIMGIP+  GTG+LK++Q
Sbjct: 1355 DHLFNASVKGKDDKIEGVSECIIMGIPVAIGTGVLKIQQ 1393


>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
            lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
            ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
          Length = 1376

 Score = 1749 bits (4530), Expect = 0.0
 Identities = 898/1422 (63%), Positives = 1105/1422 (77%), Gaps = 11/1422 (0%)
 Frame = +3

Query: 81   KSPQQIQFTKQPYIEDVGPRKIESIQFSLFNEADILKASEVEVYLGSYYDSAKKPIPNGL 260
            ++  +I+FTKQPYIEDVGP KI+SI FS+ ++ +++KA+EV+V+  +YY++  KP  NGL
Sbjct: 2    ETKMEIEFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGL 61

Query: 261  LDSRMGPPNKHGVCTTCQGSFQQCPGHYGYLNLSLPVYHAGYLTTVVNILKCICKQCSRI 440
            LD+RMGPPNK  +CTTC G+FQ CPGHYGYL L LPVY+ G+   +++ILKCICK+CS +
Sbjct: 62   LDARMGPPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCSNM 121

Query: 441  LLVEKERLDMLKKMRSLKLDPFRKNEILKRVIKRCNSMVAMQRREMTCSRCGYINGVVKK 620
            LL EK   D L+KMR+ K++P +K E+ K V+K+C++M +  +R +TC +CGY+NG+VKK
Sbjct: 122  LLDEKLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMAS--QRIITCKKCGYLNGMVKK 179

Query: 621  -ATKGPLGVIYDRSNIDNF-IEECKSAISHSKESKGSVN-CSSLLDPKVVHTLFKNMLDE 791
             A +  +G+ +DRS I    ++ECKSAISH+KES  ++N  + +LDP +V  LFK M D+
Sbjct: 180  IAAQMGIGISHDRSKIHGGEVDECKSAISHTKESTRAINPLTYVLDPNLVLGLFKGMSDK 239

Query: 792  DCELLYLNDRPDKLIITSISVPPTVIRPSVLVDGGTQSNENDITERLKCIIRANATVRQE 971
            DCELLY+  RP+ LI T + VPP  IRPSV++ GGT+SNENDITERLK II+ NA + + 
Sbjct: 240  DCELLYIAHRPENLITTCMLVPPLSIRPSVMI-GGTRSNENDITERLKLIIQNNACLHRI 298

Query: 972  LTETNPLNKSLASWVDLQTEVAQYINSDIRVAQSSMPAAKPLSGFIQRLKGKQGRFRSNL 1151
            L++     K++  W  +Q+EVA+YINS++R  Q+  P   PLSG +QRLKGKQGRFR+NL
Sbjct: 299  LSQPTTSPKNMQVWDTVQSEVAKYINSEVRGVQNQ-PEKTPLSGLLQRLKGKQGRFRANL 357

Query: 1152 SGKRSEYTGRTVISPDPNLKITEVAIPILMAQILTYPEIVSRHNIEKLRQCVRNGPDKYP 1331
            SGKR EYTGRTVISPDPNLKITEV IPILMA+ILT+PE VSRHNIEKLRQCVRNGP+KYP
Sbjct: 358  SGKRVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYP 417

Query: 1332 GAKLIKQTDGSDISLQYASRKRCADDLIYGYTVERHLQDGDIVLFNRQPSLHRMSMMSHR 1511
            GA+ ++  DGS  +L    RKR AD+L  G  V+RHL++GD VLFNRQPSLHRMS+M HR
Sbjct: 418  GARNVRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHR 477

Query: 1512 ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEI 1691
            ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEI
Sbjct: 478  ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEI 537

Query: 1692 LVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDAMDRVDLPTPALVKPVELWTGKQL 1871
            LVASTQDFLT+SFLITRKDTFYDRA+FSL+CSYMGD MD +DLPTP ++KP+ELWTGKQL
Sbjct: 538  LVASTQDFLTTSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTILKPIELWTGKQL 597

Query: 1872 FSVLIRPHAKMRVYVSLTVKEKNYDKSKNPGPETLCQKDGFVYFRNSELISGQVGKVTLG 2051
            FSVL+RP+A +RVYV+L VKEKN+ K ++   ET+C  DG+VYFRNSELISGQ+GK TLG
Sbjct: 598  FSVLLRPNASVRVYVTLNVKEKNFKKGEHGFDETMCVNDGWVYFRNSELISGQLGKATLG 657

Query: 2052 NGNKDGLYAILLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGETLSGTKEQI 2231
            NGNKDGLY+ILLRDYN+HAAA CMNRLAKLSARWIG HGFSIGIDDVQPGE L+  ++  
Sbjct: 658  NGNKDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELNKERKDS 717

Query: 2232 VQAGYGKADDLINKFNRGELQSLPGLDASQTLESEISNELNEIRENTGKECMSSLHWRNS 2411
            +Q GY +    I +FNRG LQ   GLD +++LE+EI+  LN IRE TGK CMS LHWRNS
Sbjct: 718  IQFGYDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNS 777

Query: 2412 PLIMSQCGSKGSPINISQMVACVGQQIVGGHRAPNGFIDRSLPHFPKYSRTPSAKGFVQN 2591
            PLIMSQCGSKGSPINISQMVACVGQQ V GHRAP+GFIDRSLPHFP+ S++P+AKGFV N
Sbjct: 778  PLIMSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVAN 837

Query: 2592 SFYTGLSAVEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKTLEDLYIHYDNTVRNASSC 2771
            SFY+GL+A EFFFHTMGGREGLVDTAVKTA TGYMSRRLMK LEDL +HYDNTVRNAS C
Sbjct: 838  SFYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGC 897

Query: 2772 IIQFMYGDDGMDPSQMEAKDGQPLNFDRLLMKAKATCPAIEQKS-MSTDEIYQKTLEVLV 2948
            I+QF YGDDGMDP+ ME KDG PLNFDRL +K +ATCP     + +S++E+ QK  E LV
Sbjct: 898  ILQFTYGDDGMDPALMEGKDGAPLNFDRLFLKIQATCPPRSHHNYLSSEELSQKFEEELV 957

Query: 2949 DHGIVSEGEENNKVPQLAEQKSFGQSLLEFVCKKMKSLEETQKRLKLDGEEDADACLESD 3128
             H       + ++V       +F +SL EFV               L G + A     S 
Sbjct: 958  RH-------DKSRVC----TDAFVKSLREFV--------------SLLGVKSA-----ST 987

Query: 3129 ENVALNASGLTSKQLEVFLRTCLARYNSKKIESGTAIGAIGAQSIGEPGTQMTLKTFHFA 3308
              V   ASG+T KQLEVF++ C++RY  KKIE+GTAIG IGAQSIGEPGTQMTLKTFHFA
Sbjct: 988  PQVLYKASGVTDKQLEVFVKICVSRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFA 1047

Query: 3309 GVASMNVTLGVPRIKEIIDASKDIKTPIIDAKLERNNDDAKSAIVVKGRIEKTLLGQVAK 3488
            GVASMN+T GVPRI EII+ASK+I TP+I A+LE N  +  SA  VKGRIEKT LGQVA+
Sbjct: 1048 GVASMNITQGVPRINEIINASKNISTPVISAELE-NPLELTSARWVKGRIEKTTLGQVAE 1106

Query: 3489 SVKIVMSSRRASIVVTLDMKVIQASLLSIDAYSVKQSILQTXXXXXXXXXXXXXXXXXXX 3668
            S++++M+S  AS+ + LD K+I+ + LSI  +SVK SIL+T                   
Sbjct: 1107 SIEVLMTSTSASVRIILDNKIIEEACLSISPWSVKNSILKT-----------PRIKLNDN 1155

Query: 3669 QVKVLNTSKLEVIPFVDKKNLHFELHSLKNRLPTVVVKGINTVERVVISNEKEH------ 3830
             ++VL+T  L++ P VDK   HF LH+LKN LP ++V GI TVERVV++ + +       
Sbjct: 1156 DIRVLDTG-LDITPVVDKSRTHFNLHNLKNVLPNIIVNGIKTVERVVVAEDMDKNKQIDG 1214

Query: 3831 KERCQLFVEGTGLLAVMGTEGIDGSKTISNNIQEVYRTLGIEVARRLIIDEIKKIVEAYG 4010
            K R +LFVEGT LLAVMGT GI+G  T SNN+ EV +TLGIE AR  IIDEI  ++  +G
Sbjct: 1215 KTRWKLFVEGTNLLAVMGTPGINGRTTTSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHG 1274

Query: 4011 ITIDIRHMMLLAEIMTYKGEILGITRFGMQKMKESVLMLASFEKTADHLFNASVNGRVDK 4190
            ++IDIRHMMLLA++MTY+GE+LGI R G+QKM +SVLM ASFE+T DHLF+A+++G+VD 
Sbjct: 1275 MSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTGDHLFSAAISGKVDN 1334

Query: 4191 IEGVSECIIMGIPMQFGTGLLKVRQSMPPV-ELKYGPDPIIS 4313
            IEGV+EC+IMGIPM+ GTG+LKV Q    + +LKYG DPIIS
Sbjct: 1335 IEGVTECVIMGIPMKLGTGILKVLQRTDDLPKLKYGADPIIS 1376


>ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana]
            gi|332009886|gb|AED97269.1| nuclear RNA polymerase C1
            [Arabidopsis thaliana]
          Length = 1376

 Score = 1739 bits (4504), Expect = 0.0
 Identities = 897/1422 (63%), Positives = 1100/1422 (77%), Gaps = 11/1422 (0%)
 Frame = +3

Query: 81   KSPQQIQFTKQPYIEDVGPRKIESIQFSLFNEADILKASEVEVYLGSYYDSAKKPIPNGL 260
            ++  +I+FTK+PYIEDVGP KI+SI FS+ ++ +++KA+EV+V+    YD + KP  NGL
Sbjct: 2    ETKMEIEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGL 61

Query: 261  LDSRMGPPNKHGVCTTCQGSFQQCPGHYGYLNLSLPVYHAGYLTTVVNILKCICKQCSRI 440
            LD RMGPPNK  +CTTC+G+FQ CPGHYGYL L LPVY+ GY   +++ILKCICK+CS +
Sbjct: 62   LDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNM 121

Query: 441  LLVEKERLDMLKKMRSLKLDPFRKNEILKRVIKRCNSMVAMQRREMTCSRCGYINGVVKK 620
            LL EK   D L+KMR+ +++P +K E+ K V+K+C++M +  +R +TC +CGY+NG+VKK
Sbjct: 122  LLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMAS--QRIITCKKCGYLNGMVKK 179

Query: 621  -ATKGPLGVIYDRSNIDNF-IEECKSAISHSKESKGSVN-CSSLLDPKVVHTLFKNMLDE 791
             A +  +G+ +DRS I    I+ECKSAISH+K+S  ++N  + +LDP +V  LFK M D+
Sbjct: 180  IAAQFGIGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDK 239

Query: 792  DCELLYLNDRPDKLIITSISVPPTVIRPSVLVDGGTQSNENDITERLKCIIRANATVRQE 971
            DCELLY+  RP+ LIIT + VPP  IRPSV++ GG QSNEND+T RLK II  NA++ + 
Sbjct: 240  DCELLYIAYRPENLIITCMLVPPLSIRPSVMI-GGIQSNENDLTARLKQIILGNASLHKI 298

Query: 972  LTETNPLNKSLASWVDLQTEVAQYINSDIRVAQSSMPAAKPLSGFIQRLKGKQGRFRSNL 1151
            L++     K++  W  +Q EVA+YINS++R  Q+  P   PLSG +QRLKGK GRFR+NL
Sbjct: 299  LSQPTSSPKNMQVWDTVQIEVARYINSEVRGCQNQ-PEEHPLSGILQRLKGKGGRFRANL 357

Query: 1152 SGKRSEYTGRTVISPDPNLKITEVAIPILMAQILTYPEIVSRHNIEKLRQCVRNGPDKYP 1331
            SGKR E+TGRTVISPDPNLKITEV IPILMAQILT+PE VSRHNIEKLRQCVRNGP+KYP
Sbjct: 358  SGKRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYP 417

Query: 1332 GAKLIKQTDGSDISLQYASRKRCADDLIYGYTVERHLQDGDIVLFNRQPSLHRMSMMSHR 1511
            GA+ ++  DGS  +L    RKR AD+L  G  V+RHLQ+GD+VLFNRQPSLHRMS+M HR
Sbjct: 418  GARNVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHR 477

Query: 1512 ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEI 1691
            ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEI
Sbjct: 478  ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEI 537

Query: 1692 LVASTQDFLTSSFLITRKDTFYDRASFSLMCSYMGDAMDRVDLPTPALVKPVELWTGKQL 1871
            LVASTQDFLTSSFLITRKDTFYDRA+FSL+CSYMGD MD +DLPTP ++KP+ELWTGKQ+
Sbjct: 538  LVASTQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGKQI 597

Query: 1872 FSVLIRPHAKMRVYVSLTVKEKNYDKSKNPGPETLCQKDGFVYFRNSELISGQVGKVTLG 2051
            FSVL+RP+A +RVYV+L VKEKN+ K ++   ET+C  DG+VYFRNSELISGQ+GK TLG
Sbjct: 598  FSVLLRPNASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRNSELISGQLGKATLG 657

Query: 2052 NGNKDGLYAILLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGETLSGTKEQI 2231
            NGNKDGLY+ILLRDYN+HAAA CMNRLAKLSARWIG HGFSIGIDDVQPGE LS  ++  
Sbjct: 658  NGNKDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDS 717

Query: 2232 VQAGYGKADDLINKFNRGELQSLPGLDASQTLESEISNELNEIRENTGKECMSSLHWRNS 2411
            +Q GY +    I +FNRG LQ   GLD +++LE+EI+  LN IRE TGK CMS LHWRNS
Sbjct: 718  IQFGYDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNS 777

Query: 2412 PLIMSQCGSKGSPINISQMVACVGQQIVGGHRAPNGFIDRSLPHFPKYSRTPSAKGFVQN 2591
            PLIMSQCGSKGSPINISQMVACVGQQ V GHRAP+GFIDRSLPHFP+ S++P+AKGFV N
Sbjct: 778  PLIMSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVAN 837

Query: 2592 SFYTGLSAVEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKTLEDLYIHYDNTVRNASSC 2771
            SFY+GL+A EFFFHTMGGREGLVDTAVKTA TGYMSRRLMK LEDL +HYDNTVRNAS C
Sbjct: 838  SFYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGC 897

Query: 2772 IIQFMYGDDGMDPSQMEAKDGQPLNFDRLLMKAKATCPAIEQKS-MSTDEIYQKTLEVLV 2948
            I+QF YGDDGMDP+ ME KDG PLNF+RL +K +ATCP     + +S++E+ QK  E LV
Sbjct: 898  ILQFTYGDDGMDPALMEGKDGAPLNFNRLFLKVQATCPPRSHHTYLSSEELSQKFEEELV 957

Query: 2949 DHGIVSEGEENNKVPQLAEQKSFGQSLLEFVCKKMKSLEETQKRLKLDGEEDADACLESD 3128
             H       + ++V       +F +SL EFV               L G + A     S 
Sbjct: 958  RH-------DKSRVC----TDAFVKSLREFV--------------SLLGVKSA-----SP 987

Query: 3129 ENVALNASGLTSKQLEVFLRTCLARYNSKKIESGTAIGAIGAQSIGEPGTQMTLKTFHFA 3308
              V   ASG+T KQLEVF++ C+ RY  KKIE+GTAIG IGAQSIGEPGTQMTLKTFHFA
Sbjct: 988  PQVLYKASGVTDKQLEVFVKICVFRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFA 1047

Query: 3309 GVASMNVTLGVPRIKEIIDASKDIKTPIIDAKLERNNDDAKSAIVVKGRIEKTLLGQVAK 3488
            GVASMN+T GVPRI EII+ASK+I TP+I A+LE N  +  SA  VKGRIEKT LGQVA+
Sbjct: 1048 GVASMNITQGVPRINEIINASKNISTPVISAELE-NPLELTSARWVKGRIEKTTLGQVAE 1106

Query: 3489 SVKIVMSSRRASIVVTLDMKVIQASLLSIDAYSVKQSILQTXXXXXXXXXXXXXXXXXXX 3668
            S++++M+S  AS+ + LD K+I+ + LSI  +SVK SIL+T                   
Sbjct: 1107 SIEVLMTSTSASVRIILDNKIIEEACLSITPWSVKNSILKT-----------PRIKLNDN 1155

Query: 3669 QVKVLNTSKLEVIPFVDKKNLHFELHSLKNRLPTVVVKGINTVERVVI------SNEKEH 3830
             ++VL+T  L++ P VDK   HF LH+LKN LP ++V GI TVERVV+      S + + 
Sbjct: 1156 DIRVLDTG-LDITPVVDKSRAHFNLHNLKNVLPNIIVNGIKTVERVVVAEDMDKSKQIDG 1214

Query: 3831 KERCQLFVEGTGLLAVMGTEGIDGSKTISNNIQEVYRTLGIEVARRLIIDEIKKIVEAYG 4010
            K + +LFVEGT LLAVMGT GI+G  T SNN+ EV +TLGIE AR  IIDEI  ++  +G
Sbjct: 1215 KTKWKLFVEGTNLLAVMGTPGINGRTTTSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHG 1274

Query: 4011 ITIDIRHMMLLAEIMTYKGEILGITRFGMQKMKESVLMLASFEKTADHLFNASVNGRVDK 4190
            ++IDIRHMMLLA++MTY+GE+LGI R G+QKM +SVLM ASFE+T DHLF+A+ +G+VD 
Sbjct: 1275 MSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTGDHLFSAAASGKVDN 1334

Query: 4191 IEGVSECIIMGIPMQFGTGLLKVRQSMPPV-ELKYGPDPIIS 4313
            IEGV+EC+IMGIPM+ GTG+LKV Q    + +LKYGPDPIIS
Sbjct: 1335 IEGVTECVIMGIPMKLGTGILKVLQRTDDLPKLKYGPDPIIS 1376