BLASTX nr result

ID: Lithospermum22_contig00012933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012933
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525280.1| NADH-ubiquinone oxidoreductase 18 kDa subuni...   238   1e-60
ref|XP_004141860.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   225   1e-56
ref|XP_002310893.1| predicted protein [Populus trichocarpa] gi|1...   225   1e-56
ref|XP_002265704.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   225   1e-56
gb|ABK96617.1| unknown [Populus trichocarpa x Populus deltoides]      224   3e-56

>ref|XP_002525280.1| NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223535438|gb|EEF37108.1| NADH-ubiquinone
           oxidoreductase 18 kDa subunit, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 159

 Score =  238 bits (608), Expect = 1e-60
 Identities = 117/157 (74%), Positives = 134/157 (85%)
 Frame = -1

Query: 722 MASSLQRILNQSRKSIQLNNFCEISRNLSSSSDALVEKEIKAGDIGLVSGIPQQHLRRKV 543
           MASSLQRI ++ R          +SR  S+++DALVE + K G+IG+VSGIPQ+HLRR+V
Sbjct: 1   MASSLQRIWSRGRALG--TKMGPLSRPFSATTDALVEAQAKPGEIGMVSGIPQEHLRRRV 58

Query: 542 VIFSPARTATQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSAEAA 363
           VI+SPARTATQQGSGKVG+WKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDS EAA
Sbjct: 59  VIYSPARTATQQGSGKVGRWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAA 118

Query: 362 KEFAERHGWDYTVKTHHTPLLKPKAYADNFKWKGHPE 252
           KEFAERHGW+Y VK  HTPLLK K+YADNFK+KG P+
Sbjct: 119 KEFAERHGWEYVVKKRHTPLLKVKSYADNFKFKGLPK 155


>ref|XP_004141860.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4,
           mitochondrial-like isoform 1 [Cucumis sativus]
           gi|449499860|ref|XP_004160936.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 4,
           mitochondrial-like [Cucumis sativus]
          Length = 156

 Score =  225 bits (573), Expect = 1e-56
 Identities = 113/156 (72%), Positives = 129/156 (82%)
 Frame = -1

Query: 722 MASSLQRILNQSRKSIQLNNFCEISRNLSSSSDALVEKEIKAGDIGLVSGIPQQHLRRKV 543
           MA+SLQRI +  R          +SR  S S+D+LVE  +K G+IG+VSGIP++HL R+V
Sbjct: 1   MANSLQRIWSHGRAL--RGTLAPLSR--SFSTDSLVE--MKPGEIGVVSGIPEEHLTRRV 54

Query: 542 VIFSPARTATQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSAEAA 363
           VI+SPARTA+QQGSGKVGKWKINF+STQKWENPLMGWTSTGDPYANVGDSALSFDS EAA
Sbjct: 55  VIYSPARTASQQGSGKVGKWKINFVSTQKWENPLMGWTSTGDPYANVGDSALSFDSEEAA 114

Query: 362 KEFAERHGWDYTVKTHHTPLLKPKAYADNFKWKGHP 255
           K FAE+HGW+Y VK  HTPLLK KAYADNFKWKG P
Sbjct: 115 KAFAEKHGWEYVVKKRHTPLLKAKAYADNFKWKGPP 150


>ref|XP_002310893.1| predicted protein [Populus trichocarpa] gi|118485306|gb|ABK94512.1|
           unknown [Populus trichocarpa]
           gi|222853796|gb|EEE91343.1| predicted protein [Populus
           trichocarpa]
          Length = 159

 Score =  225 bits (573), Expect = 1e-56
 Identities = 108/132 (81%), Positives = 118/132 (89%)
 Frame = -1

Query: 647 RNLSSSSDALVEKEIKAGDIGLVSGIPQQHLRRKVVIFSPARTATQQGSGKVGKWKINFM 468
           R  S+SSDALVE   KAG+IG+VSGIPQ HLRR+VVI+SPARTATQQGSGKVG+WKINFM
Sbjct: 26  RPFSASSDALVE--YKAGEIGMVSGIPQDHLRRRVVIYSPARTATQQGSGKVGRWKINFM 83

Query: 467 STQKWENPLMGWTSTGDPYANVGDSALSFDSAEAAKEFAERHGWDYTVKTHHTPLLKPKA 288
           ST KWENPLMGWTSTGDPYA+VGDSAL FDS EAAK FAERHGW+Y VK  HTPLLK KA
Sbjct: 84  STLKWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWEYVVKKRHTPLLKVKA 143

Query: 287 YADNFKWKGHPE 252
           YADNFK+KGHP+
Sbjct: 144 YADNFKFKGHPK 155


>ref|XP_002265704.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4,
           mitochondrial [Vitis vinifera]
           gi|147858131|emb|CAN83933.1| hypothetical protein
           VITISV_035766 [Vitis vinifera]
          Length = 154

 Score =  225 bits (573), Expect = 1e-56
 Identities = 114/157 (72%), Positives = 128/157 (81%)
 Frame = -1

Query: 722 MASSLQRILNQSRKSIQLNNFCEISRNLSSSSDALVEKEIKAGDIGLVSGIPQQHLRRKV 543
           MA SLQR+   S      + F  +SR  S+  DALVE  IK G+IG+VSGIP++HLRR+V
Sbjct: 1   MAKSLQRLW--SHGGSLRSAFAPMSRPFSA--DALVE--IKPGEIGMVSGIPEEHLRRRV 54

Query: 542 VIFSPARTATQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYANVGDSALSFDSAEAA 363
           VIFSPARTATQQGSGKVG+WKINFMSTQKWENPLMGWTSTGDPYANVGD+ L FDS EAA
Sbjct: 55  VIFSPARTATQQGSGKVGRWKINFMSTQKWENPLMGWTSTGDPYANVGDAGLGFDSEEAA 114

Query: 362 KEFAERHGWDYTVKTHHTPLLKPKAYADNFKWKGHPE 252
           K FAE+HGW+YTVK   TPLLK KAYADNFKWKG P+
Sbjct: 115 KAFAEKHGWEYTVKKRQTPLLKTKAYADNFKWKGPPK 151


>gb|ABK96617.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 159

 Score =  224 bits (570), Expect = 3e-56
 Identities = 107/132 (81%), Positives = 118/132 (89%)
 Frame = -1

Query: 647 RNLSSSSDALVEKEIKAGDIGLVSGIPQQHLRRKVVIFSPARTATQQGSGKVGKWKINFM 468
           R  S+SSDALVE   KAG+IG+VSGIPQ HLRR+VVI+SPART+TQQGSGKVG+WKINFM
Sbjct: 26  RPFSASSDALVE--YKAGEIGMVSGIPQDHLRRRVVIYSPARTSTQQGSGKVGRWKINFM 83

Query: 467 STQKWENPLMGWTSTGDPYANVGDSALSFDSAEAAKEFAERHGWDYTVKTHHTPLLKPKA 288
           ST KWENPLMGWTSTGDPYA+VGDSAL FDS EAAK FAERHGW+Y VK  HTPLLK KA
Sbjct: 84  STLKWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWEYVVKKRHTPLLKVKA 143

Query: 287 YADNFKWKGHPE 252
           YADNFK+KGHP+
Sbjct: 144 YADNFKFKGHPK 155


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