BLASTX nr result

ID: Lithospermum22_contig00012896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012896
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814...   185   2e-44
ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818...   184   3e-44
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...   183   7e-44
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...   182   1e-43
ref|NP_001141248.1| uncharacterized protein LOC100273335 [Zea ma...   178   2e-42

>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
          Length = 223

 Score =  185 bits (469), Expect = 2e-44
 Identities = 86/117 (73%), Positives = 104/117 (88%)
 Frame = +2

Query: 236 MDPENLKFGRGTRELTGAVDLINHYKLLPHHGFFCKRPLPLAISDTHYLHNVVGDREIRK 415
           MDPE  KFG G RELTGAVDLI+H+KLLPH+ FFCKR LP++I+DTHYLHNVVGD EIRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRK 60

Query: 416 GEGMQLDQLIEDPSSGRETSAQIQPFDMDVLSKAFQLREMTPVHLPASEKGIPTVAG 586
           G+GMQL+QLI++ SS R+T+A+IQPFD+DVL +AFQLRE  P+ LPA+EKGIPT+AG
Sbjct: 61  GDGMQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 117


>ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818495 [Glycine max]
          Length = 222

 Score =  184 bits (467), Expect = 3e-44
 Identities = 87/117 (74%), Positives = 105/117 (89%)
 Frame = +2

Query: 236 MDPENLKFGRGTRELTGAVDLINHYKLLPHHGFFCKRPLPLAISDTHYLHNVVGDREIRK 415
           MDPE  KFG G RELTGAVDLI+H+KLLPH+ FFCKRPLP++I+DTHYLHNVVGD EIRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSIADTHYLHNVVGDTEIRK 60

Query: 416 GEGMQLDQLIEDPSSGRETSAQIQPFDMDVLSKAFQLREMTPVHLPASEKGIPTVAG 586
           G+GMQLDQLI++ +S R+T+A+IQPFD+DVL +AFQLRE  P+ LPA+EKGIPT+AG
Sbjct: 61  GDGMQLDQLIQN-TSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 116


>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score =  183 bits (464), Expect = 7e-44
 Identities = 86/117 (73%), Positives = 102/117 (87%)
 Frame = +2

Query: 236 MDPENLKFGRGTRELTGAVDLINHYKLLPHHGFFCKRPLPLAISDTHYLHNVVGDREIRK 415
           M+ E+ KFGRG RELTGAVDLI+HYKLLPHH FFCK+ LPL+ISDTHYLHNVVGD EIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 416 GEGMQLDQLIEDPSSGRETSAQIQPFDMDVLSKAFQLREMTPVHLPASEKGIPTVAG 586
           GEGMQL+QLI++ S  RET+A+IQPFD D+L +AFQLRE  PV LP++EKG+PT+ G
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPG 117


>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score =  182 bits (462), Expect = 1e-43
 Identities = 84/116 (72%), Positives = 102/116 (87%)
 Frame = +2

Query: 236 MDPENLKFGRGTRELTGAVDLINHYKLLPHHGFFCKRPLPLAISDTHYLHNVVGDREIRK 415
           MDPE+ KFG G RELTGAVDLI+H+KL+PHH FFCKR LPL+ISDTHYLHNVVGD EIRK
Sbjct: 1   MDPESKKFGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRK 60

Query: 416 GEGMQLDQLIEDPSSGRETSAQIQPFDMDVLSKAFQLREMTPVHLPASEKGIPTVA 583
           G+GMQLDQLI++ S  R+++A+IQPFD+DVL +AFQL+E TP+ LP +EKG PT+A
Sbjct: 61  GDGMQLDQLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTIA 116


>ref|NP_001141248.1| uncharacterized protein LOC100273335 [Zea mays]
           gi|194703522|gb|ACF85845.1| unknown [Zea mays]
           gi|195623978|gb|ACG33819.1| hypothetical protein [Zea
           mays] gi|414878016|tpg|DAA55147.1| TPA: hypothetical
           protein ZEAMMB73_954433 [Zea mays]
           gi|414878017|tpg|DAA55148.1| TPA: hypothetical protein
           ZEAMMB73_954433 [Zea mays]
          Length = 218

 Score =  178 bits (451), Expect = 2e-42
 Identities = 84/117 (71%), Positives = 100/117 (85%)
 Frame = +2

Query: 236 MDPENLKFGRGTRELTGAVDLINHYKLLPHHGFFCKRPLPLAISDTHYLHNVVGDREIRK 415
           MD ++ KFG G RELTGAVDLINHYKLLPHH FFCK+PLPLAISDTHYLHN+VGD EIRK
Sbjct: 1   MDSDDKKFGNGPRELTGAVDLINHYKLLPHHDFFCKKPLPLAISDTHYLHNIVGDTEIRK 60

Query: 416 GEGMQLDQLIEDPSSGRETSAQIQPFDMDVLSKAFQLREMTPVHLPASEKGIPTVAG 586
           GEGM+LDQL+++ +  R+  A IQPFDM+ L +AFQLRE  PV LP++EKGIPT++G
Sbjct: 61  GEGMELDQLVQN-AYMRDKPAYIQPFDMETLGQAFQLRETAPVVLPSTEKGIPTISG 116


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