BLASTX nr result

ID: Lithospermum22_contig00012816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012816
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303456.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-35
ref|XP_002273609.1| PREDICTED: uncharacterized protein LOC100240...   154   3e-35
ref|XP_002863467.1| structural constituent of ribosome [Arabidop...   152   1e-34
ref|XP_003534307.1| PREDICTED: uncharacterized protein LOC100808...   151   3e-34
emb|CBI23273.3| unnamed protein product [Vitis vinifera]              150   7e-34

>ref|XP_002303456.1| predicted protein [Populus trichocarpa] gi|222840888|gb|EEE78435.1|
            predicted protein [Populus trichocarpa]
          Length = 167

 Score =  156 bits (394), Expect = 1e-35
 Identities = 94/177 (53%), Positives = 115/177 (64%), Gaps = 12/177 (6%)
 Frame = -1

Query: 1001 MQRWWSNLRIIASL--------PKPQSTTSLYNSHRFLHSSSNCR---LQASLFSFNGHS 855
            MQR  + LR +AS+        P PQS       HR LH ++  R   L  SL   N  S
Sbjct: 1    MQRLCTKLRSLASVSSSHRLLHPPPQSY------HRHLHFAAASRKWNLNGSLL--NTSS 52

Query: 854  SISPPSPYFPLFNNSSLL-IPTSLLQVRHITAKQRKRKLKSRRPATPIVSKVKKIKMKGY 678
            S+    P     ++S L  +P SL+QVRH+++++RK++   R+P TP  SKVKKIKMK Y
Sbjct: 53   SLPIQLPSVAAMSSSRLSQLPHSLVQVRHVSSRERKKR---RKPMTPRTSKVKKIKMKAY 109

Query: 677  SSYKGRFRVMKNGQIRRWKEGKQHNAHLKSKKAKRRLRQPGTVPVAYAKVMKKLNFC 507
            SSYK RFR M +G IRRW+EGK HNAH KSKK+KRRLRQP TVP AYAKVMKKLNFC
Sbjct: 110  SSYKERFRTMNDGTIRRWREGKNHNAHSKSKKSKRRLRQPSTVPAAYAKVMKKLNFC 166


>ref|XP_002273609.1| PREDICTED: uncharacterized protein LOC100240778 [Vitis vinifera]
          Length = 165

 Score =  154 bits (390), Expect = 3e-35
 Identities = 88/174 (50%), Positives = 112/174 (64%), Gaps = 8/174 (4%)
 Frame = -1

Query: 1001 MQRWWSNLRIIAS------LPKPQSTTSLYNSHRFLHSSSNCRLQASLFS--FNGHSSIS 846
            MQRW + L  +A+         PQ    L++S +F  S  +  +  S F   FN  +S S
Sbjct: 1    MQRWCAKLGSLATSWQNQPFMAPQWRRLLHHSPQFHRSLPSASITTSNFVPLFNAAASSS 60

Query: 845  PPSPYFPLFNNSSLLIPTSLLQVRHITAKQRKRKLKSRRPATPIVSKVKKIKMKGYSSYK 666
              + +F      S L+P  ++ VRH ++K + +    RRP TP+ SK+KKIKMK YSS+K
Sbjct: 61   MAAHFF-----RSSLLPLYVVPVRHFSSKDKNK----RRPITPVTSKIKKIKMKSYSSFK 111

Query: 665  GRFRVMKNGQIRRWKEGKQHNAHLKSKKAKRRLRQPGTVPVAYAKVMKKLNFCA 504
             RFRVM +G IRRW+EGK+HNAHLKSKKAKRRLRQP  VP AYAKVMKKLNFCA
Sbjct: 112  MRFRVMNDGNIRRWREGKRHNAHLKSKKAKRRLRQPALVPAAYAKVMKKLNFCA 165


>ref|XP_002863467.1| structural constituent of ribosome [Arabidopsis lyrata subsp. lyrata]
            gi|297309302|gb|EFH39726.1| structural constituent of
            ribosome [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  152 bits (384), Expect = 1e-34
 Identities = 87/169 (51%), Positives = 112/169 (66%), Gaps = 4/169 (2%)
 Frame = -1

Query: 1001 MQRWWSNLRIIASLPKPQSTTSLYNSHRFLHSSSNCRLQASL-FSFNGHSSISPPSPYFP 825
            MQR+ + LR I+       + S    HR +H S    L  +L F+ +   S  P +   P
Sbjct: 1    MQRFCTKLRSISLQSNRNLSFSGAAPHRLIHHSPTRHLTTTLGFANSTKWSFLPAAGVSP 60

Query: 824  LFNNS--SLLIPTSLLQVRHITAKQRKRKLKSR-RPATPIVSKVKKIKMKGYSSYKGRFR 654
            L  +S  S  +P   +QVR+IT+K++  K K + RP TPI SKVKK+K+K YSS+K RF+
Sbjct: 61   LNISSMGSTFVPHHFVQVRNITSKEKMAKWKKKWRPRTPITSKVKKVKIKFYSSFKDRFK 120

Query: 653  VMKNGQIRRWKEGKQHNAHLKSKKAKRRLRQPGTVPVAYAKVMKKLNFC 507
             + +G IRRWKEGK+HNAHLKSKK+KRRLRQPG VP AYAKVMKKLNFC
Sbjct: 121  PLNDGTIRRWKEGKRHNAHLKSKKSKRRLRQPGLVPPAYAKVMKKLNFC 169


>ref|XP_003534307.1| PREDICTED: uncharacterized protein LOC100808184 [Glycine max]
          Length = 155

 Score =  151 bits (381), Expect = 3e-34
 Identities = 88/162 (54%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
 Frame = -1

Query: 986 SNLRIIASLPKPQSTTSLYNSHRFLHSSSNCRLQASLFSFNG-HSSISPPSPYFPLFNNS 810
           S+ R++  LP PQS          LHS+SN R+ +  F F+      S PSP        
Sbjct: 23  SSRRLLHHLPPPQS----------LHSASNFRISSPSFIFSWCPPHASQPSP-------- 64

Query: 809 SLLIPTSLLQVRHITAKQRKRKLKSRRPATPIVSKVKKIKMKGYSSYKGRFRVMKNGQIR 630
                 SL+QVRH ++K+RKRK     P  P VSKVKK KMK YSS+K RFR M +G IR
Sbjct: 65  ------SLVQVRHASSKERKRK-----PVPPTVSKVKKTKMKSYSSFKSRFRAMNDGNIR 113

Query: 629 RWKEGKQHNAHLKSKKAKRRLRQPGTVPVAYAKVMKKLNFCA 504
           RWKEGK+HNAHLKSKK+KRRLR+PG VP AYAKVMKKLNF A
Sbjct: 114 RWKEGKRHNAHLKSKKSKRRLRKPGIVPAAYAKVMKKLNFFA 155


>emb|CBI23273.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  150 bits (378), Expect = 7e-34
 Identities = 82/152 (53%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
 Frame = -1

Query: 953 PQSTTSLYNSHRFLHSSSNCRLQASLFS--FNGHSSISPPSPYFPLFNNSSLLIPTSLLQ 780
           PQ    L++S +F  S  +  +  S F   FN  +S S  + +F      S L+P  ++ 
Sbjct: 3   PQWRRLLHHSPQFHRSLPSASITTSNFVPLFNAAASSSMAAHFF-----RSSLLPLYVVP 57

Query: 779 VRHITAKQRKRKLKSRRPATPIVSKVKKIKMKGYSSYKGRFRVMKNGQIRRWKEGKQHNA 600
           VRH ++K + +    RRP TP+ SK+KKIKMK YSS+K RFRVM +G IRRW+EGK+HNA
Sbjct: 58  VRHFSSKDKNK----RRPITPVTSKIKKIKMKSYSSFKMRFRVMNDGNIRRWREGKRHNA 113

Query: 599 HLKSKKAKRRLRQPGTVPVAYAKVMKKLNFCA 504
           HLKSKKAKRRLRQP  VP AYAKVMKKLNFCA
Sbjct: 114 HLKSKKAKRRLRQPALVPAAYAKVMKKLNFCA 145


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