BLASTX nr result

ID: Lithospermum22_contig00012808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012808
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002514322.1| conserved hypothetical protein [Ricinus comm...    58   7e-07
ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|222873229|gb|EEF10360.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/85 (45%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
 Frame = +3

Query: 51  MCHPGVLEYPIGYRQRLP-QRRLITHAETTXXXXXXXXXXXXNRNTNGAADGGGM----- 212
           MCHPGVL   +  R  +  QRRL+  A  T            +  T  AA GG       
Sbjct: 1   MCHPGVLS--VSQRNLVVYQRRLVLQAVETETS---------HARTEVAAGGGSAISRSI 49

Query: 213 -ECVCSPTRHPGSFRCRHHRSSYAW 284
            +C+CSPTRHPGSFRCRHHRS Y W
Sbjct: 50  NKCLCSPTRHPGSFRCRHHRSDYVW 74


>ref|XP_002514322.1| conserved hypothetical protein [Ricinus communis]
           gi|223546778|gb|EEF48276.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/37 (67%), Positives = 26/37 (70%), Gaps = 5/37 (13%)
 Frame = +3

Query: 189 GAADGGG-----MECVCSPTRHPGSFRCRHHRSSYAW 284
           G+AD GG       CVCSPTRHPGSFRCRHH   YAW
Sbjct: 47  GSADAGGGGGSIKMCVCSPTRHPGSFRCRHHHVDYAW 83


>ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|222865848|gb|EEF02979.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 22/33 (66%), Positives = 25/33 (75%)
 Frame = +3

Query: 186 NGAADGGGMECVCSPTRHPGSFRCRHHRSSYAW 284
           + A  G   +C+CSPTRHPGSFRCRHHRS Y W
Sbjct: 42  SSAVAGSIKKCLCSPTRHPGSFRCRHHRSDYVW 74


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