BLASTX nr result

ID: Lithospermum22_contig00012778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012778
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310906.1| high mobility group family [Populus trichoca...   193   7e-47
ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-l...   189   8e-46
ref|XP_002513135.1| DNA-binding protein MNB1B, putative [Ricinus...   188   2e-45
ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-l...   179   8e-43
ref|XP_003536758.1| PREDICTED: high mobility group B protein 7-l...   177   4e-42

>ref|XP_002310906.1| high mobility group family [Populus trichocarpa]
           gi|118483462|gb|ABK93630.1| unknown [Populus
           trichocarpa] gi|222853809|gb|EEE91356.1| high mobility
           group family [Populus trichocarpa]
          Length = 201

 Score =  193 bits (490), Expect = 7e-47
 Identities = 101/160 (63%), Positives = 113/160 (70%), Gaps = 3/160 (1%)
 Frame = +1

Query: 106 TGLKRAKDGSAFTKCDECKKDVPVALISFHSCSLDAKIKMNLDALVVEGPTDTKKKPSER 285
           T L RAKDGSAFTKC+ECKKDVPVALISFHSCSLDAKIKMNL+A VVE PT+ K+KP+ER
Sbjct: 21  TSLVRAKDGSAFTKCEECKKDVPVALISFHSCSLDAKIKMNLEAQVVEKPTEAKQKPAER 80

Query: 286 R---XXXXXXXXXXXXXXXXXXXXXXRPRTAFFVFLDDFRKEFTEVNPDSKKGSIVAKEA 456
           +                         RP TAFF+F+DDFRKE+ E NPDSK    VAKE 
Sbjct: 81  KKGSSTEPKLKKAKKEKKGRDPNAPKRPPTAFFLFMDDFRKEYKEANPDSKDVKKVAKEG 140

Query: 457 GEKWKSMTDEEKKPYSDKAAELKAEYDKAVESPQGSGDDD 576
           G +WKSMTDEEKK Y DKAAELKAE DKA+ES     +DD
Sbjct: 141 GVRWKSMTDEEKKQYVDKAAELKAENDKALESDNAENEDD 180


>ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera]
           gi|147815109|emb|CAN61363.1| hypothetical protein
           VITISV_034306 [Vitis vinifera]
           gi|297742725|emb|CBI35359.3| unnamed protein product
           [Vitis vinifera]
          Length = 190

 Score =  189 bits (481), Expect = 8e-46
 Identities = 100/175 (57%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
 Frame = +1

Query: 106 TGLKRAKDGSAFTKCDECKKDVPVALISFHSCSLDAKIKMNLDALVVEGPTDTKKKPSER 285
           + LKRA+DGSAF +C+ECKKDVPV LI  HSCSL+AKIK+NL+A VVE  TD KKKP+E+
Sbjct: 15  SSLKRARDGSAFIRCEECKKDVPVVLIDMHSCSLEAKIKLNLEAQVVEKVTDVKKKPAEK 74

Query: 286 RXXXXXXXXXXXXXXXXXXXXXX---RPRTAFFVFLDDFRKEFTEVNPDSKKGSIVAKEA 456
           +                         RP TAFF+F+DDFRKE+ E NPDSK  S+VAKE 
Sbjct: 75  KNATTTEPKPKKSRRLRKVKDPNMPKRPPTAFFLFMDDFRKEYKESNPDSKNVSVVAKEG 134

Query: 457 GEKWKSMTDEEKKPYSDKAAELKAEYDKAVESPQGSGDDDVEEESPNKAEKETIN 621
           GEKWKSMTDEEKKPY DKAAELKAEYDKA+E+      ++ E  S  +A+ E I+
Sbjct: 135 GEKWKSMTDEEKKPYVDKAAELKAEYDKAMETYNAENGEE-EGGSGKEADLELID 188


>ref|XP_002513135.1| DNA-binding protein MNB1B, putative [Ricinus communis]
           gi|223548146|gb|EEF49638.1| DNA-binding protein MNB1B,
           putative [Ricinus communis]
          Length = 196

 Score =  188 bits (478), Expect = 2e-45
 Identities = 99/184 (53%), Positives = 120/184 (65%), Gaps = 12/184 (6%)
 Frame = +1

Query: 97  SAPTGLKRAKDGSAFTKCDECKKDVPVALISFHSCSLDAKIKMNLDALVVEGPTDTKKKP 276
           +A   + R KDGSAF +CDECKKDVPVALIS HSCSL+A+IKMNL+A +VE P +T KKP
Sbjct: 13  TAANSMVRGKDGSAFARCDECKKDVPVALISMHSCSLEARIKMNLEAQIVEKPAETTKKP 72

Query: 277 SERRXXXXXXXXXXXXXXXXXXXXXXRPR---TAFFVFLDDFRKEFTEVNPDSKKGSIVA 447
           +ER+                      +P+   TAFF+FLD+FRK F E NPDSK    VA
Sbjct: 73  AERKKPTSTEPKAKKAKKDKKPNNPNKPKRPPTAFFIFLDEFRKTFKEANPDSKDVKRVA 132

Query: 448 KEAGEKWKSMTDEEKKPYSDKAAELKAEYDKAV---------ESPQGSGDDDVEEESPNK 600
           KEAGEKWK+MTDEEKKPY+DKA ELKAEYDKA+         +   GS  DD E+E    
Sbjct: 133 KEAGEKWKAMTDEEKKPYADKATELKAEYDKALGEVNNAENKDDEGGSEKDDAEQEVQEV 192

Query: 601 AEKE 612
            ++E
Sbjct: 193 PDEE 196


>ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
           gi|449531370|ref|XP_004172659.1| PREDICTED: high
           mobility group B protein 7-like [Cucumis sativus]
          Length = 207

 Score =  179 bits (455), Expect = 8e-43
 Identities = 100/183 (54%), Positives = 116/183 (63%), Gaps = 8/183 (4%)
 Frame = +1

Query: 100 APTG--LKRAKDGSAFTKCDECKKDVPVALISFHSCSLDAKIKMNLDALVVEGPTDTKKK 273
           A TG  L RAKDGSAF +CDEC K VPVALIS HSCSLDAKI+MNL++  VE  T +KK 
Sbjct: 21  AATGPSLVRAKDGSAFARCDECGKSVPVALISMHSCSLDAKIRMNLESQTVEKQTQSKKP 80

Query: 274 PSERRXXXXXXXXXXXXXXXXXXXXXX-----RPRTAFFVFLDDFRKEFTEVNPDSKKGS 438
             ++R                           RP TAFF+F+DDFRK + E NPDSK   
Sbjct: 81  AEKKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYKEANPDSKGVK 140

Query: 439 IVAKEAGEKWKSMTDEEKKPYSDKAAELKAEYDKAVESPQGSGDDDVEE-ESPNKAEKET 615
            VAKE GEKWKSMTDEEKKPY DKAAELKAEY+KA+ES     +DD +E E   + E+E 
Sbjct: 141 EVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALESRNAENEDDEKETEETEEIEEEV 200

Query: 616 INI 624
             I
Sbjct: 201 EGI 203


>ref|XP_003536758.1| PREDICTED: high mobility group B protein 7-like [Glycine max]
          Length = 200

 Score =  177 bits (449), Expect = 4e-42
 Identities = 95/176 (53%), Positives = 113/176 (64%), Gaps = 3/176 (1%)
 Frame = +1

Query: 100 APTGLKRAKDGSAFTKCDECKKDVPVALISFHSCSLDAKIKMNLDALVVEGPTDTKK--- 270
           A + L RAKDGSAF +CD+CKK+VPVALI  HSCSL+AKIKMNLDA VVE   + KK   
Sbjct: 17  AASVLLRAKDGSAFARCDDCKKNVPVALIDMHSCSLEAKIKMNLDAQVVEQAAEAKKPER 76

Query: 271 KPSERRXXXXXXXXXXXXXXXXXXXXXXRPRTAFFVFLDDFRKEFTEVNPDSKKGSIVAK 450
           K  + +                      RP TAFF FLDDFRK F E NPDSK    V K
Sbjct: 77  KKPKSKEPMAKKAKVEKVKKVKDPNMPKRPPTAFFAFLDDFRKSFKEANPDSKDVKRVGK 136

Query: 451 EAGEKWKSMTDEEKKPYSDKAAELKAEYDKAVESPQGSGDDDVEEESPNKAEKETI 618
           EAGEKW+SMTDEEKKPY DK AELKAEY+KA+ES +   D++ +  S  +A  + +
Sbjct: 137 EAGEKWRSMTDEEKKPYLDKVAELKAEYEKAMESYEAGQDEEDQAGSDKEAAAKEV 192


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