BLASTX nr result

ID: Lithospermum22_contig00012761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012761
         (1772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Rici...   169   3e-39
ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like...   168   5e-39
ref|XP_002319337.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-38
ref|XP_003523278.1| PREDICTED: RING-H2 finger protein ATL72-like...   165   3e-38
ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vit...   164   9e-38

>ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Ricinus communis]
           gi|223539997|gb|EEF41575.1| RING-H2 finger protein
           ATL3C, putative [Ricinus communis]
          Length = 208

 Score =  169 bits (427), Expect = 3e-39
 Identities = 97/166 (58%), Positives = 108/166 (65%), Gaps = 8/166 (4%)
 Frame = -2

Query: 967 FDTNMVXXXXXXXXXXXXXXXINSIVRCALRFSRRIAFESPNSMAARRVAMTGLKKSKLR 788
           FDTNMV               +NSIVRCALR SRR AFE+P+  AAR +A TGLKKS LR
Sbjct: 39  FDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPDEAAAR-LAATGLKKSALR 97

Query: 787 KIPVAVYGSSGANDIVPATECPICLGEFVDGEKVRVLPKCKHGFHVRCVDLWLASHSSCP 608
           +IPV +YG++G   I  AT+C ICLGEF DGEKVRVLPKC HGFHVRC+D WL SHSSCP
Sbjct: 98  QIPVVIYGAAGIQII--ATDCAICLGEFSDGEKVRVLPKCNHGFHVRCIDTWLGSHSSCP 155

Query: 607 TCRQSLLEAGVRPQNIAGNE------SGGNNNAV--DVPAGSVEEV 494
           TCRQSLLE    P N    E      S GN   +  DVP  S E V
Sbjct: 156 TCRQSLLEQPA-PGNSDATEPDVEIRSHGNGAVLQTDVPMSSDEPV 200


>ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like [Glycine max]
          Length = 198

 Score =  168 bits (425), Expect = 5e-39
 Identities = 94/159 (59%), Positives = 104/159 (65%)
 Frame = -2

Query: 967 FDTNMVXXXXXXXXXXXXXXXINSIVRCALRFSRRIAFESPNSMAARRVAMTGLKKSKLR 788
           FDTNMV               +NSIVRCALR SRR AFE+P   AAR VA  GLKKS L 
Sbjct: 35  FDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAK-GLKKSALH 93

Query: 787 KIPVAVYGSSGANDIVPATECPICLGEFVDGEKVRVLPKCKHGFHVRCVDLWLASHSSCP 608
           +IP+ VYGS  A+  + AT+CPICLGEFVDGEKVRVLPKC HGFHVRC+D WL SHSSCP
Sbjct: 94  QIPIVVYGSGSAS--IAATDCPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCP 151

Query: 607 TCRQSLLEAGVRPQNIAGNESGGNNNAVDVPAGSVEEVG 491
            CRQSLLE       I+G        AV V AG+   VG
Sbjct: 152 NCRQSLLE----HPTISG--------AVAVAAGTSHHVG 178


>ref|XP_002319337.1| predicted protein [Populus trichocarpa] gi|222857713|gb|EEE95260.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score =  166 bits (420), Expect = 2e-38
 Identities = 84/128 (65%), Positives = 95/128 (74%)
 Frame = -2

Query: 967 FDTNMVXXXXXXXXXXXXXXXINSIVRCALRFSRRIAFESPNSMAARRVAMTGLKKSKLR 788
           FD+NMV               +NSIVRCALR SRR AFE+P+  AAR +A TGLKKS LR
Sbjct: 3   FDSNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPDQTAAR-LAATGLKKSALR 61

Query: 787 KIPVAVYGSSGANDIVPATECPICLGEFVDGEKVRVLPKCKHGFHVRCVDLWLASHSSCP 608
           +IPV +YG SG + I  AT+C ICLGEF+DGEKVRVLPKC HGFHVRC+D WL SHSSCP
Sbjct: 62  QIPVIIYGVSGIHTI--ATDCAICLGEFIDGEKVRVLPKCNHGFHVRCIDTWLVSHSSCP 119

Query: 607 TCRQSLLE 584
           TCR SLLE
Sbjct: 120 TCRHSLLE 127


>ref|XP_003523278.1| PREDICTED: RING-H2 finger protein ATL72-like [Glycine max]
          Length = 216

 Score =  165 bits (418), Expect = 3e-38
 Identities = 93/168 (55%), Positives = 105/168 (62%), Gaps = 9/168 (5%)
 Frame = -2

Query: 967 FDTNMVXXXXXXXXXXXXXXXINSIVRCALRFSRRIAFESPNSMAARRVAMTGLKKSKLR 788
           FDTNMV               +NSIVRCALR SRR AFE+P   AAR VA  GLKKS L 
Sbjct: 35  FDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAK-GLKKSALH 93

Query: 787 KIPVAVYGSSGANDIVPATECPICLGEFVDGEKVRVLPKCKHGFHVRCVDLWLASHSSCP 608
           +IP+ VYGS  A+  + AT+CPICLGEFVDGEKVRVLPKC H FHVRC+D WL SHSSCP
Sbjct: 94  QIPIVVYGSGSAS--IAATDCPICLGEFVDGEKVRVLPKCNHRFHVRCIDTWLLSHSSCP 151

Query: 607 TCRQSLLE---------AGVRPQNIAGNESGGNNNAVDVPAGSVEEVG 491
            CRQSLLE               + AGN  GG +    +   +VE VG
Sbjct: 152 NCRQSLLEHTTISGAVAVAAGTSHHAGNALGGRHEHESLSV-AVEVVG 198


>ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vitis vinifera]
           gi|147769463|emb|CAN70348.1| hypothetical protein
           VITISV_012580 [Vitis vinifera]
           gi|297736494|emb|CBI25365.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  164 bits (414), Expect = 9e-38
 Identities = 84/128 (65%), Positives = 96/128 (75%)
 Frame = -2

Query: 967 FDTNMVXXXXXXXXXXXXXXXINSIVRCALRFSRRIAFESPNSMAARRVAMTGLKKSKLR 788
           FDTNMV               +NSIVRCALR SRR+AFE+ +  AAR +A TGLKKS LR
Sbjct: 37  FDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETADETAAR-LAATGLKKSALR 95

Query: 787 KIPVAVYGSSGANDIVPATECPICLGEFVDGEKVRVLPKCKHGFHVRCVDLWLASHSSCP 608
           +IPVAVYGS G N  +PAT+CPICLGEF  G+KVRVLPKC HGFH++C+D WL SHSSCP
Sbjct: 96  QIPVAVYGS-GTN--IPATDCPICLGEFEQGDKVRVLPKCHHGFHMKCIDTWLVSHSSCP 152

Query: 607 TCRQSLLE 584
           TCR SLLE
Sbjct: 153 TCRHSLLE 160


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