BLASTX nr result

ID: Lithospermum22_contig00012713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012713
         (1153 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318440.1| predicted protein [Populus trichocarpa] gi|2...   328   2e-87
ref|XP_002275994.2| PREDICTED: thylakoid lumenal 17.4 kDa protei...   327   3e-87
emb|CBI23038.3| unnamed protein product [Vitis vinifera]              327   3e-87
ref|XP_002526251.1| Thylakoid lumenal 17.4 kDa protein, chloropl...   317   5e-84
ref|XP_004146234.1| PREDICTED: thylakoid lumenal 17.4 kDa protei...   314   3e-83

>ref|XP_002318440.1| predicted protein [Populus trichocarpa] gi|222859113|gb|EEE96660.1|
            predicted protein [Populus trichocarpa]
          Length = 240

 Score =  328 bits (840), Expect = 2e-87
 Identities = 163/217 (75%), Positives = 186/217 (85%), Gaps = 1/217 (0%)
 Frame = -1

Query: 1012 FTASESHLPTASCHLKCSGLKHDMETKESSFEFK-ELKSVACGFLAVLAVSSPSPVFAGA 836
            F   + H P   C   CSG +   +++ES F+FK E+  VACG LA  AV++ SPV A  
Sbjct: 27   FPIPDLHSPLKIC---CSGSRDGSQSRESLFQFKKEINYVACGILAAWAVTAASPVIAAG 83

Query: 835  QRLPPLSTDPDRCERAFVGNTIGQANGVYDKPLDLRFCDFTNEKNNLKGKTLSAALMSDA 656
            QRLPPLST+P+RCE+AFVGNTIGQANGVYDKP+DLRFCD+TN+K+NLKGK+L+AALMSDA
Sbjct: 84   QRLPPLSTEPNRCEKAFVGNTIGQANGVYDKPIDLRFCDYTNDKSNLKGKSLAAALMSDA 143

Query: 655  KFDGADMTEVVMSKAYAVGGSFKGTNFSNAVLDRVNFGKANLKGAIFKNTVLSGSTFEEA 476
            KFDGADMTEVVMSKAYAVG SF+G +FSNAVLDRVNFGKA+LKGA+FKNTVLSGSTF+EA
Sbjct: 144  KFDGADMTEVVMSKAYAVGASFRGVDFSNAVLDRVNFGKADLKGAVFKNTVLSGSTFDEA 203

Query: 475  QLEDVIFEDTIIGYIDLQKICRNTSINEDGRAELGCR 365
            QLED IFEDTIIGYIDLQKICRNTSI  DGRAELGCR
Sbjct: 204  QLEDAIFEDTIIGYIDLQKICRNTSIGPDGRAELGCR 240


>ref|XP_002275994.2| PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Vitis
            vinifera]
          Length = 244

 Score =  327 bits (838), Expect = 3e-87
 Identities = 163/216 (75%), Positives = 186/216 (86%)
 Frame = -1

Query: 1012 FTASESHLPTASCHLKCSGLKHDMETKESSFEFKELKSVACGFLAVLAVSSPSPVFAGAQ 833
            F+  E H P     + CS      E K SS +FKELK+VA G LAV AV++ SPV A +Q
Sbjct: 32   FSVPELHSPF---RISCSASWDSPELKASSSQFKELKNVAFGILAVCAVTAASPVIAASQ 88

Query: 832  RLPPLSTDPDRCERAFVGNTIGQANGVYDKPLDLRFCDFTNEKNNLKGKTLSAALMSDAK 653
            RLPPLST+P+RCERAFVGNTIGQANGVYDKP+DLRFCD+TNEK+NLKGK+L+AALMS+AK
Sbjct: 89   RLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSLAAALMSEAK 148

Query: 652  FDGADMTEVVMSKAYAVGGSFKGTNFSNAVLDRVNFGKANLKGAIFKNTVLSGSTFEEAQ 473
            FDGADM+EVVMSKAYAVG SFKG +F+NAVLDRVNFGKANL+GA+FKNTVLSGSTF++AQ
Sbjct: 149  FDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFGKANLQGAVFKNTVLSGSTFDQAQ 208

Query: 472  LEDVIFEDTIIGYIDLQKICRNTSINEDGRAELGCR 365
            LED +FEDTIIGYIDLQKIC NTSIN DGRAELGCR
Sbjct: 209  LEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR 244


>emb|CBI23038.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  327 bits (838), Expect = 3e-87
 Identities = 163/216 (75%), Positives = 186/216 (86%)
 Frame = -1

Query: 1012 FTASESHLPTASCHLKCSGLKHDMETKESSFEFKELKSVACGFLAVLAVSSPSPVFAGAQ 833
            F+  E H P     + CS      E K SS +FKELK+VA G LAV AV++ SPV A +Q
Sbjct: 20   FSVPELHSPF---RISCSASWDSPELKASSSQFKELKNVAFGILAVCAVTAASPVIAASQ 76

Query: 832  RLPPLSTDPDRCERAFVGNTIGQANGVYDKPLDLRFCDFTNEKNNLKGKTLSAALMSDAK 653
            RLPPLST+P+RCERAFVGNTIGQANGVYDKP+DLRFCD+TNEK+NLKGK+L+AALMS+AK
Sbjct: 77   RLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSLAAALMSEAK 136

Query: 652  FDGADMTEVVMSKAYAVGGSFKGTNFSNAVLDRVNFGKANLKGAIFKNTVLSGSTFEEAQ 473
            FDGADM+EVVMSKAYAVG SFKG +F+NAVLDRVNFGKANL+GA+FKNTVLSGSTF++AQ
Sbjct: 137  FDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFGKANLQGAVFKNTVLSGSTFDQAQ 196

Query: 472  LEDVIFEDTIIGYIDLQKICRNTSINEDGRAELGCR 365
            LED +FEDTIIGYIDLQKIC NTSIN DGRAELGCR
Sbjct: 197  LEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR 232


>ref|XP_002526251.1| Thylakoid lumenal 17.4 kDa protein, chloroplast precursor, putative
            [Ricinus communis] gi|223534416|gb|EEF36120.1| Thylakoid
            lumenal 17.4 kDa protein, chloroplast precursor, putative
            [Ricinus communis]
          Length = 228

 Score =  317 bits (811), Expect = 5e-84
 Identities = 159/221 (71%), Positives = 184/221 (83%), Gaps = 4/221 (1%)
 Frame = -1

Query: 1015 SFTASESHLPTASCH----LKCSGLKHDMETKESSFEFKELKSVACGFLAVLAVSSPSPV 848
            S ++  S  P    H    + CSG     ++K     FKEL+SVACG LA  AV+S SPV
Sbjct: 12   SLSSERSRFPVPQLHPPIKIICSGSADGSKSKP----FKELQSVACGLLAAWAVTSASPV 67

Query: 847  FAGAQRLPPLSTDPDRCERAFVGNTIGQANGVYDKPLDLRFCDFTNEKNNLKGKTLSAAL 668
             A +QRLPPLST+P+RCE+AFVGNTIGQANGVYDKP+DLRFCD+TNEK+NLKGK+L+AAL
Sbjct: 68   IAASQRLPPLSTEPNRCEKAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSLAAAL 127

Query: 667  MSDAKFDGADMTEVVMSKAYAVGGSFKGTNFSNAVLDRVNFGKANLKGAIFKNTVLSGST 488
            MSDAKFDGADM+EVVMSKAYAVG SFKG +FSNAVLDRVNFGKANL+GA+FKNTVLSGST
Sbjct: 128  MSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGAVFKNTVLSGST 187

Query: 487  FEEAQLEDVIFEDTIIGYIDLQKICRNTSINEDGRAELGCR 365
            F+EAQL D +FEDTIIGYIDLQK+C+NTSIN +GR  LGCR
Sbjct: 188  FDEAQLADAVFEDTIIGYIDLQKLCKNTSINLEGREILGCR 228


>ref|XP_004146234.1| PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic-like
            [Cucumis sativus] gi|449522387|ref|XP_004168208.1|
            PREDICTED: thylakoid lumenal 17.4 kDa protein,
            chloroplastic-like [Cucumis sativus]
          Length = 237

 Score =  314 bits (804), Expect = 3e-83
 Identities = 158/231 (68%), Positives = 187/231 (80%), Gaps = 7/231 (3%)
 Frame = -1

Query: 1036 PLFSNGLS---FTASESHL----PTASCHLKCSGLKHDMETKESSFEFKELKSVACGFLA 878
            PL  NG S   F+   S +    P +   + CS  +   E +E+    K + +VACG LA
Sbjct: 7    PLSHNGFSRSFFSTRRSKIVYPFPHSLPRITCSATRDGAEPRENLSPCKHISTVACGLLA 66

Query: 877  VLAVSSPSPVFAGAQRLPPLSTDPDRCERAFVGNTIGQANGVYDKPLDLRFCDFTNEKNN 698
            V A+++ SPV A  QRLPPLST+PDRCERAFVGNTIGQANGVYDKP+DLRFCD+TNEKN 
Sbjct: 67   VWALTNTSPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQ 126

Query: 697  LKGKTLSAALMSDAKFDGADMTEVVMSKAYAVGGSFKGTNFSNAVLDRVNFGKANLKGAI 518
            LKGK+L+AALMSDAKFDGAD++EVVMSKAYAVG SFKG +FSNAVLDRVNFGKANL+GA+
Sbjct: 127  LKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGAL 186

Query: 517  FKNTVLSGSTFEEAQLEDVIFEDTIIGYIDLQKICRNTSINEDGRAELGCR 365
            FKNTVLSGSTF++AQLED +FEDTIIGYIDLQK+C N +I+ +GRAELGCR
Sbjct: 187  FKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237


Top