BLASTX nr result

ID: Lithospermum22_contig00012695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012695
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersi...   196   8e-48
ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|2...   193   5e-47
dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]              193   5e-47
ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [C...   190   3e-46
ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis ...   189   6e-46

>ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersicum]
           gi|190609945|dbj|BAG49073.1| 30S ribosomal protein S16
           [Solanum lycopersicum]
          Length = 132

 Score =  196 bits (497), Expect = 8e-48
 Identities = 99/127 (77%), Positives = 106/127 (83%), Gaps = 4/127 (3%)
 Frame = -1

Query: 764 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 585
           MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+R+K
Sbjct: 1   MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRLK 60

Query: 584 YYLSVGAQPSDPVQRLLFXXXXXXXXXXXXXXRKGGPRDTRPVHPMTGRILTPENSKN-- 411
           Y+LSVGAQPSDPVQRLLF              +KGGPRDTR V PMTGRI TPE++K+  
Sbjct: 61  YWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGQKGGPRDTRLVDPMTGRITTPESTKSAV 120

Query: 410 --VGSEV 396
             VGSEV
Sbjct: 121 PTVGSEV 127


>ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|222873562|gb|EEF10693.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  193 bits (490), Expect = 5e-47
 Identities = 99/138 (71%), Positives = 106/138 (76%)
 Frame = -1

Query: 764 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 585
           MVVR+RLSRFGC NKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK
Sbjct: 1   MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 584 YYLSVGAQPSDPVQRLLFXXXXXXXXXXXXXXRKGGPRDTRPVHPMTGRILTPENSKNVG 405
           Y+LSVGAQPS+PVQR+LF              RKGGPRDTRPV PMTGR L+PE S +  
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSS 120

Query: 404 SEVASADVKVNGNEDAST 351
              AS     N  E A+T
Sbjct: 121 QSNASK----NDTEAATT 134


>dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]
          Length = 136

 Score =  193 bits (490), Expect = 5e-47
 Identities = 99/138 (71%), Positives = 106/138 (76%)
 Frame = -1

Query: 764 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 585
           MVVR+RLSRFGC NKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK
Sbjct: 1   MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 584 YYLSVGAQPSDPVQRLLFXXXXXXXXXXXXXXRKGGPRDTRPVHPMTGRILTPENSKNVG 405
           Y+LSVGAQPS+PVQR+LF              RKGGPRDTRPV PMTGR L+PE S +  
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSS 120

Query: 404 SEVASADVKVNGNEDAST 351
              AS     N  E A+T
Sbjct: 121 QSNASK----NDTEAATT 134


>ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [Cucumis sativus]
          Length = 127

 Score =  190 bits (483), Expect = 3e-46
 Identities = 92/121 (76%), Positives = 99/121 (81%)
 Frame = -1

Query: 764 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 585
           MVVR+RLSRFGCKNKPFYRVMAADSRSPRDGKHLE+LGYYNPLPGQDGGKRMGLNFERVK
Sbjct: 1   MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVK 60

Query: 584 YYLSVGAQPSDPVQRLLFXXXXXXXXXXXXXXRKGGPRDTRPVHPMTGRILTPENSKNVG 405
           Y+LSVGAQPSDPVQR+LF              RKGGPRDTRPV P++GR +TP      G
Sbjct: 61  YWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDTRPVDPLSGRFVTPAKKPTDG 120

Query: 404 S 402
           S
Sbjct: 121 S 121


>ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis vinifera]
           gi|297738652|emb|CBI27897.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  189 bits (481), Expect = 6e-46
 Identities = 96/136 (70%), Positives = 107/136 (78%)
 Frame = -1

Query: 764 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 585
           MVVR+RLSRFGCKN+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVK
Sbjct: 1   MVVRIRLSRFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK 60

Query: 584 YYLSVGAQPSDPVQRLLFXXXXXXXXXXXXXXRKGGPRDTRPVHPMTGRILTPENSKNVG 405
           Y+LSVGAQPSDPVQ++LF              RKGG RDTRPV P+TGRILTP    N  
Sbjct: 61  YWLSVGAQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGRILTP----NKP 116

Query: 404 SEVASADVKVNGNEDA 357
           ++V       +GNED+
Sbjct: 117 TDVEQPKDDEDGNEDS 132


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