BLASTX nr result
ID: Lithospermum22_contig00012688
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00012688
(549 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat... 174 6e-42
ref|XP_002308767.1| predicted protein [Populus trichocarpa] gi|2... 173 2e-41
ref|XP_002532784.1| pentatricopeptide repeat-containing protein,... 172 3e-41
ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat... 171 5e-41
emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera] 171 5e-41
>ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449468117|ref|XP_004151768.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449532400|ref|XP_004173169.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
Length = 456
Score = 174 bits (442), Expect = 6e-42
Identities = 81/125 (64%), Positives = 105/125 (84%)
Frame = -2
Query: 401 MVRRYFSSTNSMNICIASFCRAKELLKAEAVLVDGIKLGVVPDVVTYNTLIDAYCRFVSL 222
MV +Y ST +NIC+ASFC+++++ KAEAV++DGI++GV+PDVVTYNTLID YCRF +
Sbjct: 1 MVCKY--STKFLNICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGM 58
Query: 221 DAGFSVMHRMEEARIVPNVVTYNSLIAAATRYRLLSQSIDLFDEMLCRGVSPDIWSYNTL 42
DA +SV++RM EA I P+V+TYNSLIA ATR L QS+DLF+EML G++PDIWSYNTL
Sbjct: 59 DAAYSVLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTL 118
Query: 41 IHCFF 27
+HCFF
Sbjct: 119 MHCFF 123
Score = 55.8 bits (133), Expect = 4e-06
Identities = 27/90 (30%), Positives = 50/90 (55%)
Frame = -2
Query: 287 GVVPDVVTYNTLIDAYCRFVSLDAGFSVMHRMEEARIVPNVVTYNSLIAAATRYRLLSQS 108
G +P +VTYN LI+ C+ L A +++ ++ + PN VTY +L+ + R R +
Sbjct: 177 GFIPQLVTYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERG 236
Query: 107 IDLFDEMLCRGVSPDIWSYNTLIHCFFRNG 18
++F +M +G + D ++Y T+ F + G
Sbjct: 237 FEIFSKMKNKGYAFDGFAYCTVSGAFLKLG 266
>ref|XP_002308767.1| predicted protein [Populus trichocarpa] gi|222854743|gb|EEE92290.1|
predicted protein [Populus trichocarpa]
Length = 454
Score = 173 bits (438), Expect = 2e-41
Identities = 81/120 (67%), Positives = 101/120 (84%)
Frame = -2
Query: 383 SSTNSMNICIASFCRAKELLKAEAVLVDGIKLGVVPDVVTYNTLIDAYCRFVSLDAGFSV 204
SST +NICIASFC+AK L +AE V++DG++LGV+PDVVTYNTLI+AY RFVS DA +SV
Sbjct: 5 SSTRFLNICIASFCKAKHLQRAETVIIDGVRLGVLPDVVTYNTLINAYSRFVSFDAAYSV 64
Query: 203 MHRMEEARIVPNVVTYNSLIAAATRYRLLSQSIDLFDEMLCRGVSPDIWSYNTLIHCFFR 24
+ RM+EA I P++VTYNSLIA A R+ LLS +DLF+EML G+ PDIWSYNTL+HCFF+
Sbjct: 65 LDRMKEASIKPDIVTYNSLIAGAMRHCLLSNCMDLFEEMLELGIKPDIWSYNTLMHCFFK 124
Score = 59.3 bits (142), Expect = 4e-07
Identities = 27/83 (32%), Positives = 50/83 (60%)
Frame = -2
Query: 287 GVVPDVVTYNTLIDAYCRFVSLDAGFSVMHRMEEARIVPNVVTYNSLIAAATRYRLLSQS 108
G VP +VTYN LI+ C+ L ++ + + +VPNV+TY +++ R R Q
Sbjct: 177 GFVPSLVTYNILINGLCKAWKLKTARWMLKELGASGLVPNVITYTTVMRCCFRSRRFEQG 236
Query: 107 IDLFDEMLCRGVSPDIWSYNTLI 39
+++F+EM+ +G + D ++Y T++
Sbjct: 237 LEIFEEMIDKGYTFDGFAYCTVV 259
>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 487
Score = 172 bits (436), Expect = 3e-41
Identities = 86/129 (66%), Positives = 106/129 (82%)
Frame = -2
Query: 404 RMVRRYFSSTNSMNICIASFCRAKELLKAEAVLVDGIKLGVVPDVVTYNTLIDAYCRFVS 225
RMVRR ST +NI IAS C+AKEL KAE+V++DGI+LGV+PDVVTYNTLIDAY RFVS
Sbjct: 30 RMVRRL--STRLLNISIASLCKAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVS 87
Query: 224 LDAGFSVMHRMEEARIVPNVVTYNSLIAAATRYRLLSQSIDLFDEMLCRGVSPDIWSYNT 45
+A +S+++RM EA I P+VVTYNSLIA A R LL +S++LFDEML G+ PD+WSYNT
Sbjct: 88 FNAAYSLLNRMREASISPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNT 147
Query: 44 LIHCFFRNG 18
L+HCFF+ G
Sbjct: 148 LMHCFFKLG 156
Score = 60.8 bits (146), Expect = 1e-07
Identities = 33/118 (27%), Positives = 60/118 (50%)
Frame = -2
Query: 371 SMNICIASFCRAKELLKAEAVLVDGIKLGVVPDVVTYNTLIDAYCRFVSLDAGFSVMHRM 192
+ NI I C+ A + + G VP ++TYN LI+ C+ L A S++ +
Sbjct: 179 TFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKEL 238
Query: 191 EEARIVPNVVTYNSLIAAATRYRLLSQSIDLFDEMLCRGVSPDIWSYNTLIHCFFRNG 18
E + VPN +TY +++ R R Q +++ EM+ +G + D ++Y T++ + G
Sbjct: 239 ETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKGYTFDGFAYCTVVGVLIKTG 296
>ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Vitis vinifera]
Length = 457
Score = 171 bits (434), Expect = 5e-41
Identities = 82/128 (64%), Positives = 107/128 (83%)
Frame = -2
Query: 401 MVRRYFSSTNSMNICIASFCRAKELLKAEAVLVDGIKLGVVPDVVTYNTLIDAYCRFVSL 222
MV R+ ST +NICIAS C+ +L KAEAV++DGI+LG++PDVVTYNTL+ AY RFV +
Sbjct: 1 MVCRF--STKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGI 58
Query: 221 DAGFSVMHRMEEARIVPNVVTYNSLIAAATRYRLLSQSIDLFDEMLCRGVSPDIWSYNTL 42
DA +SV+HRM+EA I P+V+TYNSLIAAAT+ LLS+S+DLF+EML G+ PD+WSYN+L
Sbjct: 59 DAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSL 118
Query: 41 IHCFFRNG 18
+HCFF+ G
Sbjct: 119 MHCFFKLG 126
Score = 65.9 bits (159), Expect = 4e-09
Identities = 35/116 (30%), Positives = 63/116 (54%)
Frame = -2
Query: 365 NICIASFCRAKELLKAEAVLVDGIKLGVVPDVVTYNTLIDAYCRFVSLDAGFSVMHRMEE 186
NI I C++++L A +L + + G VPD +TY T++ R + GF + M+
Sbjct: 186 NILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKS 245
Query: 185 ARIVPNVVTYNSLIAAATRYRLLSQSIDLFDEMLCRGVSPDIWSYNTLIHCFFRNG 18
+ +Y ++IAA T+ L ++ D+ ++M + DI SYNT+++ + RNG
Sbjct: 246 KGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNG 301
Score = 62.4 bits (150), Expect = 4e-08
Identities = 35/121 (28%), Positives = 62/121 (51%)
Frame = -2
Query: 380 STNSMNICIASFCRAKELLKAEAVLVDGIKLGVVPDVVTYNTLIDAYCRFVSLDAGFSVM 201
S+++ NI I C A ++ + G VP++VTYN LI+ C+ L+A ++
Sbjct: 146 SSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRIL 205
Query: 200 HRMEEARIVPNVVTYNSLIAAATRYRLLSQSIDLFDEMLCRGVSPDIWSYNTLIHCFFRN 21
+ E+ VP+ +TY +++ R R Q ++F EM +G + D +SY +I +
Sbjct: 206 RELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKT 265
Query: 20 G 18
G
Sbjct: 266 G 266
>emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
Length = 457
Score = 171 bits (434), Expect = 5e-41
Identities = 82/128 (64%), Positives = 107/128 (83%)
Frame = -2
Query: 401 MVRRYFSSTNSMNICIASFCRAKELLKAEAVLVDGIKLGVVPDVVTYNTLIDAYCRFVSL 222
MV R+ ST +NICIAS C+ +L KAEAV++DGI+LG++PDVVTYNTL+ AY RFV +
Sbjct: 1 MVCRF--STKLLNICIASLCKVGQLEKAEAVVIDGIRLGLLPDVVTYNTLLSAYSRFVGI 58
Query: 221 DAGFSVMHRMEEARIVPNVVTYNSLIAAATRYRLLSQSIDLFDEMLCRGVSPDIWSYNTL 42
DA +SV+HRM+EA I P+V+TYNSLIAAAT+ LLS+S+DLF+EML G+ PD+WSYN+L
Sbjct: 59 DAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSL 118
Query: 41 IHCFFRNG 18
+HCFF+ G
Sbjct: 119 MHCFFKLG 126
Score = 65.9 bits (159), Expect = 4e-09
Identities = 35/116 (30%), Positives = 63/116 (54%)
Frame = -2
Query: 365 NICIASFCRAKELLKAEAVLVDGIKLGVVPDVVTYNTLIDAYCRFVSLDAGFSVMHRMEE 186
NI I C++++L A +L + + G VPD +TY T++ R + GF + M+
Sbjct: 186 NILINGLCKSRKLNAARRILRELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKS 245
Query: 185 ARIVPNVVTYNSLIAAATRYRLLSQSIDLFDEMLCRGVSPDIWSYNTLIHCFFRNG 18
+ +Y ++IAA T+ L ++ D+ ++M + DI SYNT+++ + RNG
Sbjct: 246 KGYAFDAFSYCAVIAALTKTGRLEEANDIMEQMARSDIDLDIVSYNTVMNLYCRNG 301
Score = 62.4 bits (150), Expect = 4e-08
Identities = 35/121 (28%), Positives = 62/121 (51%)
Frame = -2
Query: 380 STNSMNICIASFCRAKELLKAEAVLVDGIKLGVVPDVVTYNTLIDAYCRFVSLDAGFSVM 201
S+++ NI I C A ++ + G VP++VTYN LI+ C+ L+A ++
Sbjct: 146 SSSTFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRIL 205
Query: 200 HRMEEARIVPNVVTYNSLIAAATRYRLLSQSIDLFDEMLCRGVSPDIWSYNTLIHCFFRN 21
+ E+ VP+ +TY +++ R R Q ++F EM +G + D +SY +I +
Sbjct: 206 RELGESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKT 265
Query: 20 G 18
G
Sbjct: 266 G 266