BLASTX nr result

ID: Lithospermum22_contig00012676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012676
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q949G3.1|PDR1_NICPL RecName: Full=Pleiotropic drug resistance...   111   8e-23
gb|AEB65936.1| ABCG subfamily transporter [Solanum tuberosum]         110   2e-22
sp|Q76CU2.1|PDR1_TOBAC RecName: Full=Pleiotropic drug resistance...   109   4e-22
dbj|BAB92011.1| pleiotropic drug resistance like protein [Nicoti...   109   4e-22
emb|CBI36209.3| unnamed protein product [Vitis vinifera]              102   7e-20

>sp|Q949G3.1|PDR1_NICPL RecName: Full=Pleiotropic drug resistance protein 1; AltName:
           Full=NpPDR1 gi|14331118|emb|CAC40990.1| ABC1 protein
           [Nicotiana plumbaginifolia]
          Length = 1436

 Score =  111 bits (278), Expect = 8e-23
 Identities = 53/77 (68%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
 Frame = -3

Query: 229 RFVKMDASASLRGSMRGNSSSLWRNSGMDVFSHSARDEDDEEALKWAALEKLPTFDRLRK 50
           R ++     S+RGS+R NS+S+WRN+G +VFS SARDEDDEEALKWAALEKLPT+DRLRK
Sbjct: 12  RSLRASIRGSMRGSIRENSNSIWRNNGAEVFSRSARDEDDEEALKWAALEKLPTYDRLRK 71

Query: 49  GLIFGSQG-AQEIDVDN 2
           G++FGSQG A E+DVD+
Sbjct: 72  GILFGSQGAAAEVDVDD 88


>gb|AEB65936.1| ABCG subfamily transporter [Solanum tuberosum]
          Length = 1387

 Score =  110 bits (275), Expect = 2e-22
 Identities = 52/68 (76%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
 Frame = -3

Query: 202 SLRGSMRGNSSSLWRNSGMDVFSHSARDEDDEEALKWAALEKLPTFDRLRKGLIFGSQG- 26
           S+RGSMR NS+S+WRN+G++VFS S RDEDDEEALKWAALEKLPT+DRLRKG++FGSQG 
Sbjct: 17  SMRGSMRENSNSIWRNNGVEVFSRSNRDEDDEEALKWAALEKLPTYDRLRKGILFGSQGV 76

Query: 25  AQEIDVDN 2
           A E+DVD+
Sbjct: 77  AAEVDVDD 84


>sp|Q76CU2.1|PDR1_TOBAC RecName: Full=Pleiotropic drug resistance protein 1; AltName:
           Full=NtPDR1 gi|41052472|dbj|BAD07483.1| PDR-type ABC
           transporter 1 [Nicotiana tabacum]
          Length = 1434

 Score =  109 bits (272), Expect = 4e-22
 Identities = 50/68 (73%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
 Frame = -3

Query: 202 SLRGSMRGNSSSLWRNSGMDVFSHSARDEDDEEALKWAALEKLPTFDRLRKGLIFGSQG- 26
           S RGS+R NS+S+WRN+G+++FS S+RDEDDEEALKWAALEKLPTFDRLRKGL+FGSQG 
Sbjct: 17  STRGSLRANSNSIWRNNGVEIFSRSSRDEDDEEALKWAALEKLPTFDRLRKGLLFGSQGA 76

Query: 25  AQEIDVDN 2
           A E+D+++
Sbjct: 77  AAEVDIND 84


>dbj|BAB92011.1| pleiotropic drug resistance like protein [Nicotiana tabacum]
          Length = 1434

 Score =  109 bits (272), Expect = 4e-22
 Identities = 50/68 (73%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
 Frame = -3

Query: 202 SLRGSMRGNSSSLWRNSGMDVFSHSARDEDDEEALKWAALEKLPTFDRLRKGLIFGSQG- 26
           S RGS+R NS+S+WRN+G+++FS S+RDEDDEEALKWAALEKLPTFDRLRKGL+FGSQG 
Sbjct: 17  STRGSLRANSNSIWRNNGVEIFSRSSRDEDDEEALKWAALEKLPTFDRLRKGLLFGSQGA 76

Query: 25  AQEIDVDN 2
           A E+D+++
Sbjct: 77  AAEVDIND 84


>emb|CBI36209.3| unnamed protein product [Vitis vinifera]
          Length = 1582

 Score =  102 bits (253), Expect = 7e-20
 Identities = 49/65 (75%), Positives = 56/65 (86%), Gaps = 1/65 (1%)
 Frame = -3

Query: 193 GSMRGNSSSLWRNSGMDVFSHSARDEDDEEALKWAALEKLPTFDRLRKGLIFGSQG-AQE 17
           GS R N SS+WRNSG DVFS S+RDEDDEEALKWAALEKLPT++RLRKGL+ GS+G A E
Sbjct: 180 GSFRRNGSSIWRNSGADVFSQSSRDEDDEEALKWAALEKLPTYNRLRKGLLMGSEGEASE 239

Query: 16  IDVDN 2
           ID+ N
Sbjct: 240 IDIHN 244


Top