BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012607
         (1197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   394   e-107
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   392   e-107
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   387   e-105
ref|XP_002518586.1| pentatricopeptide repeat-containing protein,...   365   1e-98
ref|XP_002304977.1| predicted protein [Populus trichocarpa] gi|2...   364   3e-98

>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
            mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  394 bits (1011), Expect = e-107
 Identities = 196/377 (51%), Positives = 274/377 (72%), Gaps = 5/377 (1%)
 Frame = +2

Query: 56   MSSMTRHLQRSYSTAISHHAP----IKSLSQDLYKESSLKRLVNKFKNYSDSVRFRTKIG 223
            MS ++R L R++ST+ +  A     ++S+ +D+Y+E +LKRLV KFK  S+  RFRTK G
Sbjct: 1    MSFLSRRLYRAFSTSTAATAQATGNLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTG 60

Query: 224  IYEDTIRRLASAKCYRYVEEILEHQKQYRPDMSNEGFNIRLMSLYGKSGMFDHAQKVFDE 403
            IYE+T+RRLASAK +R++EEILE QK+Y+ D+S EGF +RL++LYGKSGMFDHA KVFDE
Sbjct: 61   IYEETVRRLASAKRFRWIEEILEEQKKYK-DISREGFAVRLITLYGKSGMFDHAFKVFDE 119

Query: 404  MPDRNVKRSTKTMNALLSACVSSGKIDKIEGLFAELHERLGVKPDTVSYNVVIKGCCKCG 583
            MPD+  +RS  + NALL ACV+S K DK+EG F+EL  +L V+PD VSYN+VI G C  G
Sbjct: 120  MPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYNIVINGLCDMG 179

Query: 584  KVEKAVNIFGEMEKNGVKPDLVTFNTVLVGLYSSKRFLEGEKMWRRMIESGLKPDIRSWN 763
             ++ AV +  EMEK  ++PDL+TFNT+L G Y+S RFL+GEK+W RM +  + PDIRS+N
Sbjct: 180  SMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYN 239

Query: 764  ARIIGYVNEKRFDEAVKALSELDRTGLKLDAFSYRALIKGYCDEENLKEAKKWYAEFVRC 943
            A+++G V+EKR  E +  + E+   G+K D +S+ ALIKG+C++  + EA  WY +    
Sbjct: 240  AKLVGLVSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMREN 299

Query: 944  E-HPDKVTLETVISLAMKKGDLNWAVELCKVIFDRKCLVNAQILQEVVDTLVKDSRFQDA 1120
            +  PDK+T  T++ L  +KG  + A ELCK IF+RKCLV+  +LQ  VD LVK  +  +A
Sbjct: 300  DCLPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEA 359

Query: 1121 KRIVEMGNTNSYRCYKL 1171
            K++V++GN+NSYR Y L
Sbjct: 360  KKLVQLGNSNSYRRYNL 376


>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
            mitochondrial [Vitis vinifera]
          Length = 383

 Score =  392 bits (1007), Expect = e-107
 Identities = 198/378 (52%), Positives = 274/378 (72%), Gaps = 6/378 (1%)
 Frame = +2

Query: 56   MSSMTRHLQRSYSTAISHHAP----IKSLSQDLYKESSLKRLVNKFKNYSDSVRFRTKIG 223
            MS ++R L R++ST+ +  A     ++S+ +D+Y+E +LKRLV KFK  S+  RFRTK G
Sbjct: 1    MSFLSRRLYRAFSTSTAATAQATGNLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTG 60

Query: 224  IYEDTIRRLASAKCYRYVEEILEHQKQYRPDMSNEGFNIRLMSLYGKSGMFDHAQKVFDE 403
            IYE+T+RRLASAK +R++EEILE QK+Y+ D+S EGF +RL+SLYGKSGMFDHA KVFDE
Sbjct: 61   IYEETVRRLASAKRFRWIEEILEEQKKYK-DISREGFAVRLISLYGKSGMFDHAFKVFDE 119

Query: 404  MPDRNVKRSTKTMNALLSACVSSGKIDKIEGLFAELHERLGVKPDTVSYNVVIKGCCKCG 583
            MPD+  +RS  + NALL ACV S K DK+EG F+EL  +L V+PD VSYN+VIKG C  G
Sbjct: 120  MPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMG 179

Query: 584  KVEKAVNIFGEMEKNGVKPDLVTFNTVLVGLYSSKRFLEGEKMWRRMIESGLKPDIRSWN 763
             ++ AV +  EMEK  ++PDL+TFNT+L G Y+S RFL+GEK+W RM +  + PDIRS+N
Sbjct: 180  SMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYN 239

Query: 764  ARIIGYV-NEKRFDEAVKALSELDRTGLKLDAFSYRALIKGYCDEENLKEAKKWYAEFVR 940
            A+++G V +EKR  E +  + E+   G+K D +S+ ALIKG+C++  + EA  WY +   
Sbjct: 240  AKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRE 299

Query: 941  CE-HPDKVTLETVISLAMKKGDLNWAVELCKVIFDRKCLVNAQILQEVVDTLVKDSRFQD 1117
             +  PDK+T  T++ L  +KG  + A ELCK IF+RKCLV+  +LQ  VD LVK  +  +
Sbjct: 300  NDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVE 359

Query: 1118 AKRIVEMGNTNSYRCYKL 1171
            AK++V++GN+NSYR Y L
Sbjct: 360  AKKLVQLGNSNSYRRYNL 377


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  387 bits (994), Expect = e-105
 Identities = 196/378 (51%), Positives = 272/378 (71%), Gaps = 6/378 (1%)
 Frame = +2

Query: 56   MSSMTRHLQRSYSTAISHHAP----IKSLSQDLYKESSLKRLVNKFKNYSDSVRFRTKIG 223
            MS ++R L R++ST+ +  A     ++S+ +D+Y+E +LKRLV KFK  S+  RFRTK G
Sbjct: 1    MSFLSRRLYRAFSTSTAATAQATGNLESVFKDIYRERNLKRLVQKFKKSSELDRFRTKTG 60

Query: 224  IYEDTIRRLASAKCYRYVEEILEHQKQYRPDMSNEGFNIRLMSLYGKSGMFDHAQKVFDE 403
            IYE+T+RRLASAK +R++EEILE QK+Y+ D+S EGF +RL+SLYGKSGMFDHA KVFDE
Sbjct: 61   IYEETVRRLASAKRFRWIEEILEEQKKYK-DISREGFAVRLISLYGKSGMFDHAFKVFDE 119

Query: 404  MPDRNVKRSTKTMNALLSACVSSGKIDKIEGLFAELHERLGVKPDTVSYNVVIKGCCKCG 583
            MPD+  +RS  + N LL ACV S K DK+EG F+EL  +L V+PD VSYN+VIKG C  G
Sbjct: 120  MPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMG 179

Query: 584  KVEKAVNIFGEMEKNGVKPDLVTFNTVLVGLYSSKRFLEGEKMWRRMIESGLKPDIRSWN 763
             ++ AV +  EMEK  ++PDL+TFNT+L   Y+S RFL+GEK+W RM +  + PDIRS+N
Sbjct: 180  SMDSAVGMLDEMEKKSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKKNILPDIRSYN 239

Query: 764  ARIIGYV-NEKRFDEAVKALSELDRTGLKLDAFSYRALIKGYCDEENLKEAKKWYAEFVR 940
            A+++G V +EKR  E +  + E+   G+K D +S+ ALIKG+C++  + EA  WY +   
Sbjct: 240  AKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRE 299

Query: 941  CE-HPDKVTLETVISLAMKKGDLNWAVELCKVIFDRKCLVNAQILQEVVDTLVKDSRFQD 1117
             +  PDK+T  T++ L  +KG  + A ELCK IF+RKCLV+  +LQ  VD LVK  +  +
Sbjct: 300  NDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVE 359

Query: 1118 AKRIVEMGNTNSYRCYKL 1171
            AK++V++GN+NSYR Y L
Sbjct: 360  AKKLVQLGNSNSYRRYNL 377


>ref|XP_002518586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542431|gb|EEF43973.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 377

 Score =  365 bits (937), Expect = 1e-98
 Identities = 191/378 (50%), Positives = 264/378 (69%), Gaps = 6/378 (1%)
 Frame = +2

Query: 56   MSSMTRHLQRSYSTAI---SHHAPIKSLSQDLYKESSLKRLVNKFKNYSDSVRFRTKIGI 226
            M+ + R L R+ ST+    +  A   S  + LYKE +LKRLV KFK +S++ RFRTK GI
Sbjct: 1    MAFVIRLLSRTCSTSTQLTTGTAARASSVKVLYKERNLKRLVEKFKKFSENDRFRTKTGI 60

Query: 227  YEDTIRRLASAKCYRYVEEILEHQKQYRPDMSNEGFNIRLMSLYGKSGMFDHAQKVFDEM 406
            YE+TIRRLA AK + ++EEILE QK+Y+ D+  EG+N RL+ LYGKS MFD+++KVFDEM
Sbjct: 61   YEETIRRLAIAKRFNWIEEILEDQKKYK-DIHKEGYNARLIRLYGKSNMFDNSRKVFDEM 119

Query: 407  PDRNVKRSTKTMNALLSACVSSGKIDKIEGLFAELHERLGVKPDTVSYNVVIKGCCKCGK 586
            PDRN KR+  + NALL+ACV+S K D+++GLF +L + L +KPDTVSYN VIKG C+ G 
Sbjct: 120  PDRNCKRTVVSFNALLAACVTSKKFDEVDGLFRKLPKELEIKPDTVSYNTVIKGYCEMGA 179

Query: 587  VEKAVNIFGEMEKNGVKPDLVTFNTVLVGLYSSKRFLEGEKMWRRMIESGLKPDIRSWNA 766
            ++KA+++  EME  G  PDL+TFNT+L G YS+  F++GE++W +M++  + PDIRS+NA
Sbjct: 180  LDKAISLLVEMEMKGNPPDLITFNTLLNGFYSNGLFVDGERIWSQMVQKSIVPDIRSYNA 239

Query: 767  RIIGYVNEKRFDEAVKALSELDRTGLKLDAFSYRALIKGYCDEENLKEAKKWYAEFVRCE 946
            +++G    KR  +AV  L E+   G+K D  S+ ALIKG+  EENL+EAK WY E     
Sbjct: 240  KLLGLALVKRTKDAVLLLQEMKSKGIKPDVISFNALIKGFVKEENLEEAKYWYCETRNSG 299

Query: 947  ---HPDKVTLETVISLAMKKGDLNWAVELCKVIFDRKCLVNAQILQEVVDTLVKDSRFQD 1117
                PDK T  T+I    +KGDL +A EL K +  RKCLV+  +L+ VV+ LVK+S+ QD
Sbjct: 300  GDCGPDKFTFTTLIPFVCEKGDLRFAFELSKDVISRKCLVDMALLKCVVEGLVKESKIQD 359

Query: 1118 AKRIVEMGNTNSYRCYKL 1171
            A  +V++G  N Y  Y+L
Sbjct: 360  ANELVKLGMNNGYCRYQL 377


>ref|XP_002304977.1| predicted protein [Populus trichocarpa] gi|222847941|gb|EEE85488.1|
            predicted protein [Populus trichocarpa]
          Length = 381

 Score =  364 bits (934), Expect = 3e-98
 Identities = 186/377 (49%), Positives = 264/377 (70%), Gaps = 5/377 (1%)
 Frame = +2

Query: 56   MSSMTRHLQRSYSTAISHHAP----IKSLSQDLYKESSLKRLVNKFKNYSDSVRFRTKIG 223
            MS+++R  + ++STA S  A     ++SLS ++++E SLKRLV KFK  S++ RFRTK  
Sbjct: 1    MSALSRLFRSTFSTATSAAATENTIVRSLSNEVFRERSLKRLVEKFKKASENERFRTKSA 60

Query: 224  IYEDTIRRLASAKCYRYVEEILEHQKQYRPDMSNEGFNIRLMSLYGKSGMFDHAQKVFDE 403
            IY+DTIRRLA+AK +RYVEEILE+QKQY+ DMS EGFN RL+SLYG SGMFD+A+KVFDE
Sbjct: 61   IYKDTIRRLAAAKKFRYVEEILENQKQYQ-DMSKEGFNARLISLYGSSGMFDNARKVFDE 119

Query: 404  MPDRNVKRSTKTMNALLSACVSSGKIDKIEGLFAELHERLGVKPDTVSYNVVIKGCCKCG 583
            M +R   R+  + NALL ACV+S K D++ GLF  L E L ++PD VSYN V+K  C+ G
Sbjct: 120  MLERKCARTVLSFNALLGACVNSKKFDEVGGLFRGLSEELEIEPDLVSYNTVMKAFCEMG 179

Query: 584  KVEKAVNIFGEMEKNGVKPDLVTFNTVLVGLYSSKRFLEGEKMWRRMIESGLKPDIRSWN 763
             ++ AV++  E+EK G+KPDL+TFNT+L GLY++ RF  GE++W+RM E  +KPD RS+N
Sbjct: 180  SLDSAVSLLDEIEKKGLKPDLITFNTLLNGLYANGRFDAGERIWQRMKEKNVKPDGRSYN 239

Query: 764  ARIIGYVNEKRFDEAVKALSELDRTGLKLDAFSYRALIKGYCDEENLKEAKKWYAEFVRC 943
             +++G   EKR  +A K + E+   G++ D FSY ALI+G+ +E +L+EAK WY E  + 
Sbjct: 240  EKLLGLALEKRMKDATKVVEEMKSEGIEFDIFSYNALIRGFVNEGDLEEAKGWYGEIRKS 299

Query: 944  E-HPDKVTLETVISLAMKKGDLNWAVELCKVIFDRKCLVNAQILQEVVDTLVKDSRFQDA 1120
            +  PDK+T +T+I   ++KGD+ +A +LCK     K  V   ++Q V+D L K+S+  +A
Sbjct: 300  DIKPDKLTFKTLIPFVVEKGDVAFAFDLCKDALSSKLAVKEALIQPVLDALAKESKINEA 359

Query: 1121 KRIVEMGNTNSYRCYKL 1171
            K +VE+         KL
Sbjct: 360  KELVELSKARRSDSLKL 376