BLASTX nr result

ID: Lithospermum22_contig00012543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012543
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197937.1| leucine-rich repeat extensin-like protein 7 [Ar...    77   8e-12
ref|XP_002867142.1| hypothetical protein ARALYDRAFT_491276 [Arab...    75   3e-11
ref|XP_002872172.1| leucine-rich repeat family protein [Arabidop...    74   7e-11
ref|NP_179188.1| Pollen-specific leucine-rich repeat extensin-li...    74   7e-11
ref|XP_003630813.1| Extensin-like protein [Medicago truncatula] ...    73   9e-11

>ref|NP_197937.1| leucine-rich repeat extensin-like protein 7 [Arabidopsis thaliana]
           gi|75339262|sp|Q4PSE6.1|LRX7_ARATH RecName:
           Full=Leucine-rich repeat extensin-like protein 7;
           Short=AtLRX7; Short=LRR/EXTENSIN7; AltName: Full=Cell
           wall hydroxyproline-rich glycoprotein; Flags: Precursor
           gi|67633824|gb|AAY78836.1| leucine-rich repeat family
           protein [Arabidopsis thaliana]
           gi|332006078|gb|AED93461.1| leucine-rich repeat
           extensin-like protein 7 [Arabidopsis thaliana]
          Length = 433

 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
 Frame = -2

Query: 977 KLENLQEIIIGDNLFTGIVPEEICTLPGLEKLVIKDNYFQGMHQSCYNIKQVNITNNCFP 798
           ++ENL+ + +  N+ +G++P+E+C+L  L       NYF G   +C  ++  N T NCF 
Sbjct: 288 QMENLEVLNVERNMLSGLIPDELCSLEKLRDFRYGSNYFTGEPATCRYLENYNYTMNCFK 347

Query: 797 GIPDQKSVEDCNLVLNQPIDC---KVMEKTGC--KPPKFASPSNRTNSEVPT 657
            + DQ+S+ +C + L++P+DC   K    + C   PP   SPS++  +  P+
Sbjct: 348 DVRDQRSMMECKMFLSKPVDCDSFKCSPGSSCFSPPPSQISPSSQPLAPAPS 399


>ref|XP_002867142.1| hypothetical protein ARALYDRAFT_491276 [Arabidopsis lyrata subsp.
           lyrata] gi|297312978|gb|EFH43401.1| hypothetical protein
           ARALYDRAFT_491276 [Arabidopsis lyrata subsp. lyrata]
          Length = 668

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
 Frame = -2

Query: 974 LENLQEIIIGDNLFTGIVPEEICTLPGLEKLVIKDNYFQGMHQSCY---NIKQVNI--TN 810
           L N++E  I  N  TG+VP+ IC LP L       NYF G   SC      K++ +  T 
Sbjct: 306 LTNVEEFDISGNKLTGLVPDNICNLPNLVNFTYSYNYFNGQGGSCVPGGGRKEIALDDTR 365

Query: 809 NCFPGIPDQKSVEDCNLVLNQPIDCKVMEKTGCKPPKFASPSNRTNSEVPT 657
           NC P  PDQ+S ++C +V+N+P+DC   +  G      ++PS  +    PT
Sbjct: 366 NCLPARPDQRSSQECAVVINRPVDCSKDKCAGGGGGGSSTPSKPSPVHKPT 416


>ref|XP_002872172.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297318009|gb|EFH48431.1| leucine-rich repeat
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 435

 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
 Frame = -2

Query: 977 KLENLQEIIIGDNLFTGIVPEEICTLPGLEKLVIKDNYFQGMHQSCYNIKQVNITNNCFP 798
           ++ENL+ + +  N+ +G++PEE+C+L  L +     NYF G   +C  ++  N T NC  
Sbjct: 289 QMENLEVLNVERNMLSGLIPEELCSLEKLREFRYGSNYFTGEPATCRYLENYNYTMNCLK 348

Query: 797 GIPDQKSVEDCNLVLNQPIDC---KVMEKTGC---KPPKFASPSNRTNSEVPT 657
              DQ+S+ +C + L++P+DC   K    + C    PP   SPS++  +  P+
Sbjct: 349 DERDQRSMMECKMFLSKPVDCDSFKCSPVSSCFSPPPPSQISPSSQPLAPAPS 401


>ref|NP_179188.1| Pollen-specific leucine-rich repeat extensin-like protein 3
           [Arabidopsis thaliana]
           gi|75338652|sp|Q9XIL9.1|PLRX3_ARATH RecName:
           Full=Pollen-specific leucine-rich repeat extensin-like
           protein 3; Short=AtPEX3; Short=Pollen-specific
           LRR/EXTENSIN3; AltName: Full=Cell wall
           hydroxyproline-rich glycoprotein; Flags: Precursor
           gi|5306245|gb|AAD41978.1| unknown protein [Arabidopsis
           thaliana] gi|330251349|gb|AEC06443.1| Pollen-specific
           leucine-rich repeat extensin-like protein 3 [Arabidopsis
           thaliana]
          Length = 727

 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
 Frame = -2

Query: 974 LENLQEIIIGDNLFTGIVPEEICTLPGLEKLVIKDNYFQGMHQSCYNIKQVNI----TNN 807
           L +++E  I  N  TG +PE IC LP L  L    NYF G   SC    Q  I    T N
Sbjct: 297 LTSMEEFDISGNKLTGFIPENICKLPKLVNLTYAYNYFNGQGDSCVPGSQKQIALDDTRN 356

Query: 806 CFPGIPDQKSVEDCNLVLNQPIDCKVMEKTGCKPPKFASPSNRTNSEVPT 657
           C P  P Q+S ++C +V+++P+DC    K  C      +  +++ S VPT
Sbjct: 357 CLPDRPKQRSAKECAVVISRPVDC---SKDKCAGGSSQATPSKSPSPVPT 403


>ref|XP_003630813.1| Extensin-like protein [Medicago truncatula]
           gi|355524835|gb|AET05289.1| Extensin-like protein
           [Medicago truncatula]
          Length = 712

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
 Frame = -2

Query: 968 NLQEIIIGDNLFTGIVPEEICTLPGLEKLVIKDNYFQGMHQSCYNIKQVNITNNCFPGIP 789
           +L+E+ +  N+F+G +P  IC LP L+     DN+F G   +C+ +   +   NC P  P
Sbjct: 278 SLEELNVAHNMFSGKIPSSICMLPNLKNFTFSDNFFTGEPPACFGLPASDDRRNCLPARP 337

Query: 788 DQKSVEDCNLVLNQPIDCKVMEKTGCKP--PKFASPS 684
            QK++ +C   L++P+DCK     GCK   P    PS
Sbjct: 338 FQKTLVECASFLSKPVDCK---SFGCKAFNPSLPLPS 371


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