BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012526
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   5e-19
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    69   4e-18
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    73   2e-17
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    76   5e-17
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    76   5e-17

>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 75.1 bits (183), Expect(3) = 5e-19
 Identities = 35/92 (38%), Positives = 53/92 (57%)
 Frame = -1

Query: 602  FSSIVDRVKCKVADWKPRLLSKVGSDVFNKSVLQVIPTYAMQCFLLSIQCCNEINYILSK 423
            F S++DR+  K+  WK +LLS+ G ++  KSV+Q IPTY M  + L      +I+  +++
Sbjct: 769  FDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQKIHSAMAR 828

Query: 422  LWRGYDSNERAIY*ANWDKLCKSKKEGDLVFR 327
             W G    +R I+  NWD LC  K  G + FR
Sbjct: 829  FWWGSSDTQRRIHWKNWDSLCTLKCFGGMGFR 860



 Score = 33.9 bits (76), Expect(3) = 5e-19
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 333 FQDLKTFNQALLSKQVWRIILNP 265
           F+DL+ FN ALL +Q WR++  P
Sbjct: 859 FRDLRVFNDALLGRQAWRLVREP 881



 Score = 30.8 bits (68), Expect(3) = 5e-19
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 271 EPSSPLARLYKARYFLESCFWSAQLGTSPSFT 176
           EP S LAR+ KA+Y+    F  A LG S S++
Sbjct: 880 EPHSLLARVMKAKYYSNHDFLDAPLGVSTSYS 911


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 68.9 bits (167), Expect(3) = 4e-18
 Identities = 37/92 (40%), Positives = 51/92 (55%)
 Frame = -1

Query: 602  FSSIVDRVKCKVADWKPRLLSKVGSDVFNKSVLQVIPTYAMQCFLLSIQCCNEINYILSK 423
            F S+ DRV  +V  W+ +LLSK G +V  K+V Q IP Y M  F L     + IN  +++
Sbjct: 1053 FQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVAR 1112

Query: 422  LWRGYDSNERAIY*ANWDKLCKSKKEGDLVFR 327
             W G +   + I+   W  LC SKK+G L FR
Sbjct: 1113 FWWGKEGG-KGIHWRRWSDLCFSKKDGGLGFR 1143



 Score = 34.7 bits (78), Expect(3) = 4e-18
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 333  FQDLKTFNQALLSKQVWRIILNP 265
            F+DL  FNQALL KQ WR+++ P
Sbjct: 1142 FRDLSLFNQALLGKQGWRLMMYP 1164



 Score = 33.1 bits (74), Expect(3) = 4e-18
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -2

Query: 268  PSSPLARLYKARYFLESCFWSAQLGTSPSF 179
            P S +AR+ KA+YF    F  A+LG+SPS+
Sbjct: 1164 PDSLVARMLKAKYFPWDDFMEAELGSSPSY 1193


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 73.2 bits (178), Expect(3) = 2e-17
 Identities = 33/92 (35%), Positives = 52/92 (56%)
 Frame = -1

Query: 602  FSSIVDRVKCKVADWKPRLLSKVGSDVFNKSVLQVIPTYAMQCFLLSIQCCNEINYILSK 423
            F S++DR+  K+  WK +LLS+ G +V  KSV+Q IPTY M  +   +    +I   +++
Sbjct: 769  FDSLIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMAR 828

Query: 422  LWRGYDSNERAIY*ANWDKLCKSKKEGDLVFR 327
             W G    +R I+  NWD +C  K  G + F+
Sbjct: 829  FWWGSSDTQRKIHWKNWDSMCNLKCFGGMGFK 860



 Score = 31.2 bits (69), Expect(3) = 2e-17
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 333 FQDLKTFNQALLSKQVWRIILNPR 262
           F+DL  FN ALL +Q WR+   P+
Sbjct: 859 FKDLTIFNDALLGRQAWRLTREPQ 882



 Score = 30.0 bits (66), Expect(3) = 2e-17
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 271 EPSSPLARLYKARYFLESCFWSAQLGTSPSFT 176
           EP S L R+ KA+YF    F +A LG S S++
Sbjct: 880 EPQSLLGRVMKAKYFPNCDFLNAPLGHSSSYS 911


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 75.9 bits (185), Expect(2) = 5e-17
 Identities = 39/103 (37%), Positives = 53/103 (51%)
 Frame = -1

Query: 593 IVDRVKCKVADWKPRLLSKVGSDVFNKSVLQVIPTYAMQCFLLSIQCCNEINYILSKLWR 414
           + +RV  ++  WK + LS  G +V  KSV Q IPTY M CF L    C EI  ++   W 
Sbjct: 17  VKERVWSRLNGWKEKSLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCXEIESMVCNFWW 76

Query: 413 GYDSNERAIY*ANWDKLCKSKKEGDLVFRISRPSTRLYLANRC 285
           G     R I+  +W +LCKSK  G + FR  +      LA +C
Sbjct: 77  GQKEETRKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQC 119



 Score = 37.4 bits (85), Expect(2) = 5e-17
 Identities = 16/31 (51%), Positives = 24/31 (77%)
 Frame = -2

Query: 268 PSSPLARLYKARYFLESCFWSAQLGTSPSFT 176
           P S +AR++KARYF ++ F  A +G++PSFT
Sbjct: 126 PQSLVARVFKARYFPQTSFLDALVGSNPSFT 156


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 75.9 bits (185), Expect(2) = 5e-17
 Identities = 38/103 (36%), Positives = 54/103 (52%)
 Frame = -1

Query: 593 IVDRVKCKVADWKPRLLSKVGSDVFNKSVLQVIPTYAMQCFLLSIQCCNEINYILSKLWR 414
           + +RV  ++  WK + LS  G +V  KSV Q IPTY M CF L    C+EI  ++   W 
Sbjct: 17  VKERVWTRLNGWKEKFLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCHEIESMVCNFWW 76

Query: 413 GYDSNERAIY*ANWDKLCKSKKEGDLVFRISRPSTRLYLANRC 285
                 R I+  +W +LCKSK +G + FR  +      LA +C
Sbjct: 77  XQKEETRKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQC 119



 Score = 37.4 bits (85), Expect(2) = 5e-17
 Identities = 16/31 (51%), Positives = 24/31 (77%)
 Frame = -2

Query: 268 PSSPLARLYKARYFLESCFWSAQLGTSPSFT 176
           P S +AR++KARYF ++ F  A +G++PSFT
Sbjct: 126 PQSLVARVFKARYFPQTSFLDALVGSNPSFT 156