BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012505
         (2312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   140   2e-80
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...   119   2e-76
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]              119   1e-73
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...   114   2e-72
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...   144   8e-70

>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  140 bits (354), Expect(5) = 2e-80
 Identities = 71/218 (32%), Positives = 127/218 (58%), Gaps = 1/218 (0%)
 Frame = +2

Query: 1079 MEDDGQVVTEPQDVEKRIIKFYKALFGSKGPLTSVQSCIIRSTIVR-SLPFDVSDSLVA* 1255
            ++  G+ +    +++   + F+K LFGS   L S +     +++ R     +    L A 
Sbjct: 386  LDQTGRRIENTDELQTHCVDFFKELFGSSSHLISAEGISQINSLTRFKCDENTRQLLEAE 445

Query: 1256 PTMQEVKESFFSMVMGKSLGPDGLSIEFYKHHWEKIGRDIWEAFLYMFATGDIPSRVNAT 1435
             +  ++K  FF++   KS GPDG + EF+K  W  +G  +  A    F +G +  + N+T
Sbjct: 446  VSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNST 505

Query: 1436 ILSLIPKVDHLSNVRDYRPISCCNNLYKSITKILLRRMNGLMNGLVSP*QSAFIPGRYIS 1615
             ++++PK  +   + ++RPISCCN +YK I+K+L RR+  ++   +SP QSAF+ GR ++
Sbjct: 506  AVTMVPKKPNADRITEFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLT 565

Query: 1616 DSVLMLQEVVQGYHKENGVPKAVIKVDMQKAYDMVKLG 1729
            ++VL+  E+VQG+ + N   + V+KVD++KA+D V  G
Sbjct: 566  ENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWG 603



 Score =  100 bits (250), Expect(5) = 2e-80
 Identities = 48/129 (37%), Positives = 78/129 (60%)
 Frame = +1

Query: 1744 MEAMGFPWRFIFLLQCCITRASFSLNLNGTLRGWFTSSRGLRQGDPISSYLFILVLEIFN 1923
            ++A   P RF+  ++ CIT  SFS+N++G+L G+F  S+GLRQGDP+S  LF++ +EI +
Sbjct: 609  LKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILS 668

Query: 1924 GLMRKASGTPRYTFHSKCRELGITHLSFADDMILLVSANMDIFRVVKDTLSLFGDLTGLK 2103
             L+          +H K  E+ I+ L+FADD+++         R +K  L  F +L+GL+
Sbjct: 669  RLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKNLSGLE 728

Query: 2104 LNCSKRKIY 2130
            +N  K  +Y
Sbjct: 729  MNTEKSAVY 737



 Score = 88.2 bits (217), Expect(5) = 2e-80
 Identities = 81/334 (24%), Positives = 133/334 (39%), Gaps = 23/334 (6%)
 Frame = +1

Query: 7   WNVRGLNDSLKQHTIKKLQQKYNII--CLIENKLKVHTVDSILHCILPNWHFIHNIQGVA 180
           WNVRG N+S+++   +K  +    +   ++E ++K H     L    P W  + N +  A
Sbjct: 7   WNVRGFNNSVRRRNFRKWFKLSKALFGSILETRVKEHRARRSLLSSFPGWKSVCNYEFAA 66

Query: 181 IGRVIVAWNPSVYSVQALVCMAQHVLLEVQVSS-GLKFLFSVVYGANLYIPRRSLWRSL- 354
           +GR+ V W+P+V  V  L    Q +   V++     +F+ + VY  N    RR LW  L 
Sbjct: 67  LGRIWVVWDPAV-EVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWSELE 125

Query: 355 ---MDANTQGRPWILAGDFNRICXXXXXXXXXXXXXXXNSMSV*TLMLQK*RAMGVCLLG 525
               +  T  +PWI+ GDFN+                    S  T  +++ R    CLL 
Sbjct: 126 LLAANQTTSDKPWIILGDFNQ---------SLDPVDASTGGSRITRGMEEFRE---CLLT 173

Query: 526 ALIGGVRM*M*ESWIIFCNEE----------------WLSTFPQSSVH*LPPGISDHAQM 657
           + I  +       +  + N+E                WL   P S         SDH   
Sbjct: 174 SNISDLPF-RGNHYTWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPS 232

Query: 658 VVHLKQSLVVGPRLFKYHIFWQSHPSYAAVVEGCWQNSGGSGSPLDLVLRKLKSVKQVLS 837
            V++        + FK   F   HP +   +   W      GS +  + +K K +K  + 
Sbjct: 233 CVNISNQSGGRNKPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIR 292

Query: 838 SLNREHFSDIGGRVRHCSEQLQEL*RNIFGGQLS 939
           + NREH+S +  RV   ++ L+    N+     S
Sbjct: 293 TFNREHYSGLEKRVVQAAQNLKTCQNNLLAAPSS 326



 Score = 36.2 bits (82), Expect(5) = 2e-80
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 2193 TLPMKYLGVPLSSKSLTNEDYSVLIDRVCGMIDRLGT 2303
            T P +YLG+PL  + L   DYS LID++    +   T
Sbjct: 758  TFPFRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWAT 794



 Score = 25.0 bits (53), Expect(5) = 2e-80
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 996  AELDLLRSKARMTWLANGAFSTYFFH 1073
            AE   L  K+R+ WL  G  +T FFH
Sbjct: 345  AEERFLCQKSRVLWLKCGDSNTTFFH 370


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score =  119 bits (298), Expect(4) = 2e-76
 Identities = 68/216 (31%), Positives = 111/216 (51%), Gaps = 4/216 (1%)
 Frame = +2

Query: 1085 DDGQVVTEPQDVEKRIIKFYKALFGSKGPLTSVQSCIIRSTIVRSLPFD----VSDSLVA 1252
            DDG  V     ++  +I +Y  L G   P  +V    +   I   LPF     ++  L  
Sbjct: 389  DDGFRVENVDQIKGMLIAYYSHLLGI--PSENVTPFSVEK-IKGLLPFRCDSFLASQLTT 445

Query: 1253 *PTMQEVKESFFSMVMGKSLGPDGLSIEFYKHHWEKIGRDIWEAFLYMFATGDIPSRVNA 1432
             P+ +E+ +  FSM   K+ GPDG  +EF+   W  +   +  A    F +G++P   NA
Sbjct: 446  IPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNA 505

Query: 1433 TILSLIPKVDHLSNVRDYRPISCCNNLYKSITKILLRRMNGLMNGLVSP*QSAFIPGRYI 1612
            T ++LIPKV     +  +RP++CC  +YK IT+I+ RR+   ++  V   Q  FI GR +
Sbjct: 506  TAITLIPKVTGADRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLL 565

Query: 1613 SDSVLMLQEVVQGYHKENGVPKAVIKVDMQKAYDMV 1720
             ++VL+  E+V  +  +    +  ++VD+ KAYD V
Sbjct: 566  CENVLLASELVDNFEADGETTRGCLQVDISKAYDNV 601



 Score =  115 bits (289), Expect(4) = 2e-76
 Identities = 90/353 (25%), Positives = 144/353 (40%), Gaps = 12/353 (3%)
 Frame = +1

Query: 7    WNVRGLNDSLKQHTIKKLQQKYNII--CLIENKLKVHTVDSILHCILPNWHFIHNIQGVA 180
            WN+RGLN   +Q  ++      N++  C +E  +     +S+L   LP W    N     
Sbjct: 6    WNIRGLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSNYCCSE 65

Query: 181  IGRVIVAWNPSVYSVQALVCMAQHVLLEVQVSSGLK-FLFSVVYGANLYIPRRSLWRSLM 357
            +GR+ + W+PS+ SV       Q +   +++ S L+ F  + VYG N  + RRSLW  ++
Sbjct: 66   LGRIWIVWDPSI-SVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSLWEDIL 124

Query: 358  DANTQG----RPWILAGDFNRICXXXXXXXXXXXXXXXNSMSV*TLMLQK*RAMGVCLLG 525
              +        PW+L GDFN+I                  M      L+  +   +   G
Sbjct: 125  VLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRG 184

Query: 526  ALIGGVRM*M*ESWI-----IFCNEEWLSTFPQSSVH*LPPGISDHAQMVVHLKQSLVVG 690
                          +        N EW + FP +     PPG SDHA  ++ +       
Sbjct: 185  VFFTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPS 244

Query: 691  PRLFKYHIFWQSHPSYAAVVEGCWQNSGGSGSPLDLVLRKLKSVKQVLSSLNREHFSDIG 870
             + FKY  F  SHPSY A +   W+ +   GS +  + + LK  K    +LNR  FS+I 
Sbjct: 245  KKSFKYFSFLSSHPSYLAALSTAWEANTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSNIQ 304

Query: 871  GRVRHCSEQLQEL*RNIFGGQLSQENITLEQNLQSELVNLVRQNWIC*GVKLE 1029
             R      +L++         +  E +T   +      ++ R+ WI     LE
Sbjct: 305  QRTAQSLTRLED---------IQVELLTSPSDTLFRREHVARKQWIFFAAALE 348



 Score = 84.0 bits (206), Expect(4) = 2e-76
 Identities = 43/129 (33%), Positives = 72/129 (55%)
 Frame = +1

Query: 1741 VMEAMGFPWRFIFLLQCCITRASFSLNLNGTLRGWFTSSRGLRQGDPISSYLFILVLEIF 1920
            +++A+  P  FI  +  CI+ AS+S+  NG L G+F   +G+RQGDP+SS+LF+LV+++ 
Sbjct: 609  ILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGKKGIRQGDPMSSHLFVLVMDVL 668

Query: 1921 NGLMRKASGTPRYTFHSKCRELGITHLSFADDMILLVSANMDIFRVVKDTLSLFGDLTGL 2100
            +  +   +    +  H  C    ITHLSFADD+++           +   L  F   +GL
Sbjct: 669  SKSLDLGALNGLFNLHPNCLAPIITHLSFADDVLVFSDGAASSIAGILTILDDFRQGSGL 728

Query: 2101 KLNCSKRKI 2127
             +N  K ++
Sbjct: 729  GINREKTEL 737



 Score = 37.7 bits (86), Expect(4) = 2e-76
 Identities = 14/28 (50%), Positives = 22/28 (78%)
 Frame = +3

Query: 2193 TLPMKYLGVPLSSKSLTNEDYSVLIDRV 2276
            +LP++YLGVPL S+ +  +DY  L+DR+
Sbjct: 760  SLPVRYLGVPLMSQKMRRQDYQPLVDRI 787


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score =  119 bits (298), Expect(4) = 1e-73
 Identities = 68/216 (31%), Positives = 111/216 (51%), Gaps = 4/216 (1%)
 Frame = +2

Query: 1085 DDGQVVTEPQDVEKRIIKFYKALFGSKGPLTSVQSCIIRSTIVRSLPFD----VSDSLVA 1252
            DDG  V     ++  +I +Y  L G   P  +V    +   I   LPF     ++  L  
Sbjct: 432  DDGFRVENVDQIKGMLIAYYSHLLGI--PSENVTPFSVEK-IKGLLPFRCDSFLASQLTT 488

Query: 1253 *PTMQEVKESFFSMVMGKSLGPDGLSIEFYKHHWEKIGRDIWEAFLYMFATGDIPSRVNA 1432
             P+ +E+ +  FSM   K+ GPDG  +EF+   W  +   +  A    F +G++P   NA
Sbjct: 489  IPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNA 548

Query: 1433 TILSLIPKVDHLSNVRDYRPISCCNNLYKSITKILLRRMNGLMNGLVSP*QSAFIPGRYI 1612
            T ++LIPKV     +  +RP++CC  +YK IT+I+ RR+   ++  V   Q  FI GR +
Sbjct: 549  TAITLIPKVTGADRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLL 608

Query: 1613 SDSVLMLQEVVQGYHKENGVPKAVIKVDMQKAYDMV 1720
             ++VL+  E+V  +  +    +  ++VD+ KAYD V
Sbjct: 609  CENVLLASELVDNFEADGETTRGCLQVDISKAYDNV 644



 Score =  107 bits (266), Expect(4) = 1e-73
 Identities = 87/349 (24%), Positives = 140/349 (40%), Gaps = 12/349 (3%)
 Frame = +1

Query: 19   GLNDSLKQHTIKKLQQKYNII--CLIENKLKVHTVDSILHCILPNWHFIHNIQGVAIGRV 192
            GLN   +Q  ++      N++  C +E  +     +S+L   LP W    N     +GR+
Sbjct: 53   GLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSNYCCSELGRI 112

Query: 193  IVAWNPSVYSVQALVCMAQHVLLEVQVSSGLK-FLFSVVYGANLYIPRRSLWRSLMDANT 369
             + W+PS+ SV       Q +   +++ S L+ F  + VYG N  + RRSLW  ++  + 
Sbjct: 113  WIVWDPSI-SVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSLWEDILVLSR 171

Query: 370  QG----RPWILAGDFNRICXXXXXXXXXXXXXXXNSMSV*TLMLQK*RAMGVCLLGALIG 537
                   PW+L GDFN+I                  M      L+  +   +   G    
Sbjct: 172  TSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFT 231

Query: 538  GVRM*M*ESWI-----IFCNEEWLSTFPQSSVH*LPPGISDHAQMVVHLKQSLVVGPRLF 702
                      +        N EW + FP +     PPG SDHA  ++ +        + F
Sbjct: 232  WSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSF 291

Query: 703  KYHIFWQSHPSYAAVVEGCWQNSGGSGSPLDLVLRKLKSVKQVLSSLNREHFSDIGGRVR 882
            KY  F  SHPSY A +   W+ +   GS +  + + LK  K    +LNR  FS+I  R  
Sbjct: 292  KYFSFLSSHPSYLAALSTAWEENTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSNIQQRTA 351

Query: 883  HCSEQLQEL*RNIFGGQLSQENITLEQNLQSELVNLVRQNWIC*GVKLE 1029
                +L++         +  E +T   +      ++ R+ WI     LE
Sbjct: 352  QSLTRLED---------IQVELLTSPSDTLFRREHVARKQWIFFAAALE 391



 Score = 84.0 bits (206), Expect(4) = 1e-73
 Identities = 43/129 (33%), Positives = 72/129 (55%)
 Frame = +1

Query: 1741 VMEAMGFPWRFIFLLQCCITRASFSLNLNGTLRGWFTSSRGLRQGDPISSYLFILVLEIF 1920
            +++A+  P  FI  +  CI+ AS+S+  NG L G+F   +G+RQGDP+SS+LF+LV+++ 
Sbjct: 652  ILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGKKGIRQGDPMSSHLFVLVMDVL 711

Query: 1921 NGLMRKASGTPRYTFHSKCRELGITHLSFADDMILLVSANMDIFRVVKDTLSLFGDLTGL 2100
            +  +   +    +  H  C    ITHLSFADD+++           +   L  F   +GL
Sbjct: 712  SKSLDLGALNGLFNLHPNCLAPIITHLSFADDVLVFSDGAASSIAGILTILDDFRQGSGL 771

Query: 2101 KLNCSKRKI 2127
             +N  K ++
Sbjct: 772  GINREKTEL 780



 Score = 37.7 bits (86), Expect(4) = 1e-73
 Identities = 14/28 (50%), Positives = 22/28 (78%)
 Frame = +3

Query: 2193 TLPMKYLGVPLSSKSLTNEDYSVLIDRV 2276
            +LP++YLGVPL S+ +  +DY  L+DR+
Sbjct: 803  SLPVRYLGVPLMSQKMRRQDYQPLVDRI 830


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
            putative protein [Arabidopsis thaliana]
          Length = 1141

 Score =  114 bits (284), Expect(5) = 2e-72
 Identities = 64/215 (29%), Positives = 113/215 (52%)
 Frame = +2

Query: 1079 MEDDGQVVTEPQDVEKRIIKFYKALFGSKGPLTSVQSCIIRSTIVRSLPFDVSDSLVA*P 1258
            ++D G  +   Q +      +++ L        S++   +   +    P+     L A  
Sbjct: 380  VDDSGTQIDSQQGIADHCALYFENLLSDDNDPYSLEQDDMNLLLTYRCPYSQVADLEAMF 439

Query: 1259 TMQEVKESFFSMVMGKSLGPDGLSIEFYKHHWEKIGRDIWEAFLYMFATGDIPSRVNATI 1438
            + +++K +FF +   K+ GPDG  +                A    F +G++  + NAT 
Sbjct: 440  SDEDIKAAFFGLPSNKACGPDGFPVT--------------AAVREFFISGNLLKQWNATT 485

Query: 1439 LSLIPKVDHLSNVRDYRPISCCNNLYKSITKILLRRMNGLMNGLVSP*QSAFIPGRYISD 1618
            + LIPK  + S   D+RPISC N LYK I ++L  R+  L++ ++SP QSAF+PGR +++
Sbjct: 486  IVLIPKFPNASCTSDFRPISCMNTLYKVIARLLTDRLQKLLSCVISPSQSAFLPGRLLAE 545

Query: 1619 SVLMLQEVVQGYHKENGVPKAVIKVDMQKAYDMVK 1723
            +VL+  E+V GY+  N   + ++KVD++KA+D V+
Sbjct: 546  NVLLATEMVHGYNWRNISLRGMLKVDLRKAFDSVR 580



 Score = 99.8 bits (247), Expect(5) = 2e-72
 Identities = 47/131 (35%), Positives = 78/131 (59%)
 Frame = +1

Query: 1738 AVMEAMGFPWRFIFLLQCCITRASFSLNLNGTLRGWFTSSRGLRQGDPISSYLFILVLEI 1917
            A + A+G P +FI  +  CI+  +F++++NG   G+F S++GLRQGDP+S YLF+L +E+
Sbjct: 586  AALLALGVPTKFINWIHQCISTPTFTVSVNGCCGGFFKSAKGLRQGDPLSPYLFVLAMEV 645

Query: 1918 FNGLMRKASGTPRYTFHSKCRELGITHLSFADDMILLVSANMDIFRVVKDTLSLFGDLTG 2097
            F+ L+     +    +H K  +L I+HL FADD+++           + +TL  F   +G
Sbjct: 646  FSKLLNSRFDSGYIRYHPKASDLSISHLMFADDVMIFFDGGSSSLHGICETLEDFASWSG 705

Query: 2098 LKLNCSKRKIY 2130
            LK+N  K   +
Sbjct: 706  LKVNNDKSHFF 716



 Score = 93.6 bits (231), Expect(5) = 2e-72
 Identities = 85/312 (27%), Positives = 133/312 (42%), Gaps = 20/312 (6%)
 Frame = +1

Query: 85  LIENKLKVHTVDSILHCILPNWHFIHNIQGVAIGRVIVAWNPSVYSVQALVCMAQHVLLE 264
           +IE  +K       ++ +LP W F  N     +G++ V W+PSV  V  +    Q +  E
Sbjct: 28  VIEKHVKQPKDKKFINALLPGWFFDENYGFSDLGKIWVLWDPSV-EVVIVAKSLQMITCE 86

Query: 265 VQVSSGLKFL-FSVVYGANLYIPRRSLWRSLM----DANTQGRPWILAGDFNRICXXXXX 429
           V   +   ++  SVVY AN    R+ LWR +        T  RPWIL GDFN++      
Sbjct: 87  VLFPNSRTWIVISVVYAANEDDKRKELWREITALVASPVTFNRPWILLGDFNQVLHPHE- 145

Query: 430 XXXXXXXXXXNSMSV*TLMLQK*RAMGVCLLGALIGGV---------------RM*M*ES 564
                     +S  V   + ++ R    CLL A +  +               R    + 
Sbjct: 146 ----------HSRHVSLNVDRRIRDFRECLLDAELSDLVYKGSSFTWWNKSKTRPVAKKI 195

Query: 565 WIIFCNEEWLSTFPQSSVH*LPPGISDHAQMVVHLKQSLVVGPRLFKYHIFWQSHPSYAA 744
             I  NE W + FP S     PP  SDHA   V L+   +   R FK+  F   +P +  
Sbjct: 196 DRILVNESWSNLFPSSFGLFGPPDFSDHASCGVVLELDPIKAKRPFKFFNFLLKNPEFLN 255

Query: 745 VVEGCWQNSGGSGSPLDLVLRKLKSVKQVLSSLNREHFSDIGGRVRHCSEQLQEL*RNIF 924
           +V   W ++   GS +  V +KLK++K+ +   +R ++S++  R     E L        
Sbjct: 256 LVWDVWYSTNVVGSSMFRVSKKLKALKKPIKDFSRLNYSNLEKRTEEAHETL-------- 307

Query: 925 GGQLSQENITLE 960
              LS +N+TL+
Sbjct: 308 ---LSFQNLTLD 316



 Score = 28.5 bits (62), Expect(5) = 2e-72
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 996  AELDLLRSKARMTWLANGAFSTYFFH 1073
            AE    R ++R+TW A G  +T +FH
Sbjct: 339  AEESFFRQRSRVTWFAEGDGNTRYFH 364



 Score = 28.1 bits (61), Expect(5) = 2e-72
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = +3

Query: 2145 ESVREALCAYMEMFEVTLPMKYLGVPLSSKSLTNEDYSVLIDR 2273
            ++ R +L AY    +  LP++YLG+PL  + L   +Y  L+++
Sbjct: 722  QAERNSLAAY-GFPQGCLPIRYLGLPLMCRKLRIAEYEPLLEK 763


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
            thaliana]
          Length = 1253

 Score =  144 bits (364), Expect(4) = 8e-70
 Identities = 77/224 (34%), Positives = 134/224 (59%), Gaps = 9/224 (4%)
 Frame = +2

Query: 1079 MEDDGQVVTEPQDVEKRIIKFYKALFGSK-GPLTSVQSCIIRSTIVRSLPF----DVSDS 1243
            ++D+G  +     +++  I+++  L G + GP       +I+      LPF    D    
Sbjct: 337  IDDNGVKIDTQLGIKEHCIEYFSNLLGGEVGP-----PMLIQEDFDLLLPFRCSHDQKKE 391

Query: 1244 LVA*PTMQEVKESFFSMVMGKSLGPDGLSIEFYKHHWEKIGRDIWEAFLYMFATGDIPSR 1423
            L    + Q++K +FFS    K+ GPDG  +EF+K  W  IG ++ +A    F +  +  +
Sbjct: 392  LAMSFSRQDIKSAFFSFPSNKTSGPDGFPVEFFKETWSVIGTEVTDAVSEFFTSSVLLKQ 451

Query: 1424 VNATILSLIPKVDHLSNVRDYRPISCCN----NLYKSITKILLRRMNGLMNGLVSP*QSA 1591
             NAT L LIPK+ + S + D+RPISC +     LYK I ++L  R+  L++ ++SP QSA
Sbjct: 452  WNATTLVLIPKITNASKMNDFRPISCNDFGPITLYKVIARLLTNRLQCLLSQVISPFQSA 511

Query: 1592 FIPGRYISDSVLMLQEVVQGYHKENGVPKAVIKVDMQKAYDMVK 1723
            F+PGR+++++VL+  E+VQGY+++N  P+ ++KVD++KA+D ++
Sbjct: 512  FLPGRFLAENVLLATELVQGYNRQNIDPRGMLKVDLRKAFDSIR 555



 Score = 96.3 bits (238), Expect(4) = 8e-70
 Identities = 46/131 (35%), Positives = 76/131 (58%)
 Frame = +1

Query: 1738 AVMEAMGFPWRFIFLLQCCITRASFSLNLNGTLRGWFTSSRGLRQGDPISSYLFILVLEI 1917
            + ++A+G P RF++ +  CI+  +FS+ +NG   G+F S+RGLRQG+P+S +LF+L +E+
Sbjct: 561  SALKAIGIPDRFVYWITQCISTPTFSVCVNGNTGGFFKSTRGLRQGNPLSPFLFVLAMEV 620

Query: 1918 FNGLMRKASGTPRYTFHSKCRELGITHLSFADDMILLVSANMDIFRVVKDTLSLFGDLTG 2097
            F+ L+          +H K   L I+HL FADD+++           + + L  F   +G
Sbjct: 621  FSSLLNSRFQAGYIHYHPKTSPLSISHLMFADDIMVFFDGGSSSLHGISEALEDFAFWSG 680

Query: 2098 LKLNCSKRKIY 2130
            L LN  K  +Y
Sbjct: 681  LVLNREKTHLY 691



 Score = 67.0 bits (162), Expect(4) = 8e-70
 Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
 Frame = +1

Query: 298 SVVYGANLYIPRRSLWRSLM----DANTQGRPWILAGDFNRICXXXXXXXXXXXXXXXNS 465
           S+VY AN  I R+ LW  L+      +  G+PWI+ GDFN++                +S
Sbjct: 56  SIVYAANEAITRKELWEELLLLSVSLSGNGKPWIMLGDFNQVLCPAE-----------HS 104

Query: 466 MSV*TLMLQK*RAMGVCLLGALI---------------GGVRM*M*ESWIIFCNEEWLST 600
            +    + ++ +    CL  A +                  R    +   I  NE W S 
Sbjct: 105 QATSLNVNRRMKVFRDCLFEAELCDLVFKGNTFTWWNKSATRPVAKKLDRILVNESWCSR 164

Query: 601 FPQSSVH*LPPGISDHAQMVVHLKQSLVVGPRLFKYHIFWQSHPSYAAVVEGCWQNSGGS 780
           FP +      P  SDHA   V +   +    R F+++ F   +P + ++V   W +    
Sbjct: 165 FPSAYAVFGEPDFSDHASCGVIINPLMHREKRPFRFYNFLLQNPDFISLVGELWYSINVV 224

Query: 781 GSPLDLVLRKLKSVKQVLSSLNREHFSDIGGRVR 882
           GS +  + +KLK++K  + + + E+FS++  RV+
Sbjct: 225 GSSMFKMSKKLKALKNPIRTFSMENFSNLEKRVK 258



 Score = 26.9 bits (58), Expect(4) = 8e-70
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 993  KAELDLLRSKARMTWLANGAFSTYFFH 1073
            KAE      ++R+TW+  G  +T +FH
Sbjct: 295  KAEESFFCQRSRVTWMGEGDSNTSYFH 321