BLASTX nr result

ID: Lithospermum22_contig00012502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012502
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32681.3| unnamed protein product [Vitis vinifera]              117   2e-24
ref|XP_002274909.2| PREDICTED: auxin-induced protein 5NG4-like [...   115   4e-24
ref|XP_002312071.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002308146.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_004161682.1| PREDICTED: auxin-induced protein 5NG4-like [...   113   2e-23

>emb|CBI32681.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  117 bits (292), Expect = 2e-24
 Identities = 54/113 (47%), Positives = 83/113 (73%)
 Frame = -3

Query: 457 GIICSGVSYYISGMIMEVKGPVFVTAFSPLTMVIVAIMSSLFLAEHLTLGQLLGAVIIVV 278
           GI+CSG++YYI G++M+ +GPVFVTAF+PL+M+IVA+MSS  LAE + LG+++GA++IV 
Sbjct: 272 GIVCSGLAYYIQGVVMKDRGPVFVTAFNPLSMIIVAVMSSFILAEQMYLGRVIGAIVIVA 331

Query: 277 GLYAVVWGKSRDLKSSTSSCDKRELEDHKRTTSIYVDEEAKNTSNLKHTEITN 119
           GLY VVWGKS++ KS + S D + ++D + T +     ++   S  +H+   N
Sbjct: 332 GLYFVVWGKSKEYKSGSPSTDGQMVQDKQMTDA---SSDSNENSTPEHSSQAN 381


>ref|XP_002274909.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
          Length = 396

 Score =  115 bits (289), Expect = 4e-24
 Identities = 51/91 (56%), Positives = 75/91 (82%)
 Frame = -3

Query: 457 GIICSGVSYYISGMIMEVKGPVFVTAFSPLTMVIVAIMSSLFLAEHLTLGQLLGAVIIVV 278
           GI+CSG++YYI G++M+ +GPVFVTAF+PL+M+IVA+MSS  LAE + LG+++GA++IV 
Sbjct: 266 GIVCSGLAYYIQGVVMKDRGPVFVTAFNPLSMIIVAVMSSFILAEQMYLGRVIGAIVIVA 325

Query: 277 GLYAVVWGKSRDLKSSTSSCDKRELEDHKRT 185
           GLY VVWGKS++ KS + S D + ++D + T
Sbjct: 326 GLYFVVWGKSKEYKSGSPSTDGQMVQDKQMT 356


>ref|XP_002312071.1| predicted protein [Populus trichocarpa] gi|222851891|gb|EEE89438.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  115 bits (289), Expect = 4e-24
 Identities = 60/106 (56%), Positives = 76/106 (71%), Gaps = 7/106 (6%)
 Frame = -3

Query: 457 GIICSGVSYYISGMIMEVKGPVFVTAFSPLTMVIVAIMSSLFLAEHLTLGQLLGAVIIVV 278
           G+ICSG+ YY+ G+IM+ KGPVFVTAFSPL+MVIVAI+ S FL E L +G+++GAV+IV 
Sbjct: 259 GVICSGIGYYVQGLIMKRKGPVFVTAFSPLSMVIVAILGSFFLKEILCVGRVIGAVVIVT 318

Query: 277 GLYAVVWGKSRDLKSSTSSCDKRE-------LEDHKRTTSIYVDEE 161
           GLY V+WGKS+D   S SS DK E        E  +RT    VD+E
Sbjct: 319 GLYLVLWGKSKDQPPSDSSDDKAEAIVTQTATEMQERTDPETVDQE 364


>ref|XP_002308146.1| predicted protein [Populus trichocarpa] gi|222854122|gb|EEE91669.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/93 (56%), Positives = 73/93 (78%)
 Frame = -3

Query: 457 GIICSGVSYYISGMIMEVKGPVFVTAFSPLTMVIVAIMSSLFLAEHLTLGQLLGAVIIVV 278
           GI CSG++YYI G++M+ +GPVFVTAFSPL MVIVA+MSS+  AE + LG++LGA+IIV 
Sbjct: 256 GIFCSGLAYYIQGIVMKDRGPVFVTAFSPLCMVIVAVMSSIIWAEQMYLGRILGAIIIVA 315

Query: 277 GLYAVVWGKSRDLKSSTSSCDKRELEDHKRTTS 179
           GLY VVWGKS+D K+S+   D++ +   + T +
Sbjct: 316 GLYLVVWGKSKDYKTSSPPADEQTIPVKQTTVA 348


>ref|XP_004161682.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]
          Length = 368

 Score =  113 bits (283), Expect = 2e-23
 Identities = 57/101 (56%), Positives = 76/101 (75%), Gaps = 4/101 (3%)
 Frame = -3

Query: 457 GIICSGVSYYISGMIMEVKGPVFVTAFSPLTMVIVAIMSSLFLAEHLTLGQLLGAVIIVV 278
           GI CSG++YYI G++M+ KGPVFVTAFSPL+MVIVAIMSS  L E L  G++LGAV+I+V
Sbjct: 254 GIFCSGLAYYIQGLVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRVLGAVVIIV 313

Query: 277 GLYAVVWGKSRDLKSSTSS----CDKRELEDHKRTTSIYVD 167
           GLY VVWGK++D   S+S       K+ LED+K   ++ ++
Sbjct: 314 GLYLVVWGKNKDENCSSSEDLKLPTKQILEDNKTMETLTIE 354


Top