BLASTX nr result

ID: Lithospermum22_contig00012489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012489
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40324.3| unnamed protein product [Vitis vinifera]              385   e-104
ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   385   e-104
ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   382   e-103
ref|XP_002511831.1| dead box ATP-dependent RNA helicase, putativ...   375   e-102
ref|XP_003623900.1| DEAD-box ATP-dependent RNA helicase [Medicag...   370   e-100

>emb|CBI40324.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  385 bits (989), Expect = e-104
 Identities = 187/206 (90%), Positives = 202/206 (98%)
 Frame = +2

Query: 602  WLKRNQLGSDNAVDKIEKRVQPEGVDSSSQDWKAQLKVPPPDTRYRTEDVTATKGNEFED 781
            WL+RNQ G+D+AVD++EK VQ E VDSSSQDWKA+LK+PPPDTRYRTEDVTATKGNEFED
Sbjct: 43   WLRRNQAGADSAVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFED 102

Query: 782  YFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQ 961
            YFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQ
Sbjct: 103  YFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQ 162

Query: 962  DNNVIQVVILVPTRELALQTAQVCKELGKNLQIQVMVTTGGTSLKDDIMRLYQPVHLLVG 1141
            DNNVIQVVILVPTRELALQT+QVCKELGK+L+IQVMVTTGGTSLKDDIMRLYQPVHLLVG
Sbjct: 163  DNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVG 222

Query: 1142 TPGRILDLAKRGICVLKDCSMLVMDE 1219
            TPGRILDL+K+G+C+LKDCSMLVMDE
Sbjct: 223  TPGRILDLSKKGVCILKDCSMLVMDE 248


>ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Vitis vinifera]
            gi|147785187|emb|CAN75439.1| hypothetical protein
            VITISV_000835 [Vitis vinifera]
          Length = 491

 Score =  385 bits (989), Expect = e-104
 Identities = 187/206 (90%), Positives = 202/206 (98%)
 Frame = +2

Query: 602  WLKRNQLGSDNAVDKIEKRVQPEGVDSSSQDWKAQLKVPPPDTRYRTEDVTATKGNEFED 781
            WL+RNQ G+D+AVD++EK VQ E VDSSSQDWKA+LK+PPPDTRYRTEDVTATKGNEFED
Sbjct: 62   WLRRNQAGADSAVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFED 121

Query: 782  YFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQ 961
            YFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQ
Sbjct: 122  YFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQ 181

Query: 962  DNNVIQVVILVPTRELALQTAQVCKELGKNLQIQVMVTTGGTSLKDDIMRLYQPVHLLVG 1141
            DNNVIQVVILVPTRELALQT+QVCKELGK+L+IQVMVTTGGTSLKDDIMRLYQPVHLLVG
Sbjct: 182  DNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVG 241

Query: 1142 TPGRILDLAKRGICVLKDCSMLVMDE 1219
            TPGRILDL+K+G+C+LKDCSMLVMDE
Sbjct: 242  TPGRILDLSKKGVCILKDCSMLVMDE 267


>ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Cucumis
            sativus] gi|449480172|ref|XP_004155819.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 8-like [Cucumis
            sativus]
          Length = 492

 Score =  382 bits (981), Expect = e-103
 Identities = 189/209 (90%), Positives = 201/209 (96%), Gaps = 3/209 (1%)
 Frame = +2

Query: 602  WLKRNQLG---SDNAVDKIEKRVQPEGVDSSSQDWKAQLKVPPPDTRYRTEDVTATKGNE 772
            WLKRNQLG   +D+ VD++EK VQ E VDSSSQDWKA+LK+PPPDTRY+TEDVTATKGNE
Sbjct: 60   WLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKGNE 119

Query: 773  FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 952
            FEDYFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK
Sbjct: 120  FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 179

Query: 953  IDQDNNVIQVVILVPTRELALQTAQVCKELGKNLQIQVMVTTGGTSLKDDIMRLYQPVHL 1132
            IDQDNNVIQVVILVPTRELALQT+QVCKELGKNL IQVMVTTGGTSLKDDIMRLYQPVHL
Sbjct: 180  IDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHL 239

Query: 1133 LVGTPGRILDLAKRGICVLKDCSMLVMDE 1219
            LVGTPGRILDLAK+G+CVLKDCSML+MDE
Sbjct: 240  LVGTPGRILDLAKKGVCVLKDCSMLIMDE 268


>ref|XP_002511831.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223549011|gb|EEF50500.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 507

 Score =  375 bits (964), Expect = e-102
 Identities = 185/207 (89%), Positives = 202/207 (97%), Gaps = 1/207 (0%)
 Frame = +2

Query: 602  WLKRNQLG-SDNAVDKIEKRVQPEGVDSSSQDWKAQLKVPPPDTRYRTEDVTATKGNEFE 778
            WL+R+QL  +D++VD++EK VQ E VDS+SQDWKA+LK+PPPDTRY+TEDVTATKGNEFE
Sbjct: 77   WLRRSQLPPADSSVDEVEKTVQSEAVDSTSQDWKARLKIPPPDTRYKTEDVTATKGNEFE 136

Query: 779  DYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID 958
            DYFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID
Sbjct: 137  DYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID 196

Query: 959  QDNNVIQVVILVPTRELALQTAQVCKELGKNLQIQVMVTTGGTSLKDDIMRLYQPVHLLV 1138
            QDNNVIQVVILVPTRELALQT+QVCKELGK+L+IQVMVTTGGTSLKDDIMRLYQPVHLLV
Sbjct: 197  QDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLV 256

Query: 1139 GTPGRILDLAKRGICVLKDCSMLVMDE 1219
            GTPGRILDLAK+G+CVLKDCSMLVMDE
Sbjct: 257  GTPGRILDLAKKGVCVLKDCSMLVMDE 283


>ref|XP_003623900.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355498915|gb|AES80118.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 514

 Score =  370 bits (949), Expect = e-100
 Identities = 185/209 (88%), Positives = 197/209 (94%), Gaps = 3/209 (1%)
 Frame = +2

Query: 602  WLKRNQLGSD---NAVDKIEKRVQPEGVDSSSQDWKAQLKVPPPDTRYRTEDVTATKGNE 772
            WL+RNQLG     N V+++EK VQ E  DSSSQDWKA+LK+PP DTRYRTEDVTATKGNE
Sbjct: 82   WLRRNQLGGGTDTNVVEEVEKTVQSEANDSSSQDWKARLKLPPADTRYRTEDVTATKGNE 141

Query: 773  FEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 952
            FEDYFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKTAAF IPALEK
Sbjct: 142  FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEK 201

Query: 953  IDQDNNVIQVVILVPTRELALQTAQVCKELGKNLQIQVMVTTGGTSLKDDIMRLYQPVHL 1132
            IDQDNN+IQVVILVPTRELALQT+QVCKELGK+LQIQVMVTTGGTSLKDDIMRLYQPVHL
Sbjct: 202  IDQDNNIIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHL 261

Query: 1133 LVGTPGRILDLAKRGICVLKDCSMLVMDE 1219
            LVGTPGRILDLAK+G+CVLKDCSMLVMDE
Sbjct: 262  LVGTPGRILDLAKKGVCVLKDCSMLVMDE 290


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