BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012410
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...   194   1e-47
emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]   191   1e-46
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              186   6e-45
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   185   8e-45
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   183   3e-44

>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
            gi|225898008|dbj|BAH30336.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 1459

 Score =  194 bits (494), Expect = 1e-47
 Identities = 92/167 (55%), Positives = 120/167 (71%)
 Frame = -3

Query: 505  HAMVTRSRNDITKPKKLTSLSASIIPSPFLHTPTCFTEAIKLPHWQQAMAEEFNALTQQH 326
            H M TRS+N+ITKPK  TSL+ ++   P L  P   T+A+K   W+ AM++EF+A  + H
Sbjct: 919  HQMKTRSKNNITKPKTKTSLTVALT-QPHLSEPNTVTQALKDKKWRFAMSDEFDAQQRNH 977

Query: 325  TWDLVPPNSTHNLIGSKWIFRVKLKANGTLDKYKAQLVAQGFKQQHGIDFDQTFSPVIKH 146
            TWDLVPPN T +L+G +W+F++K   NG +DKYKA+LVA+GF QQ+G+D+ +TFSPVIK 
Sbjct: 978  TWDLVPPNPTQHLVGCRWVFKLKYLPNGLIDKYKARLVAKGFNQQYGVDYAETFSPVIKA 1037

Query: 145  ATIRTVLTIAVSNKWSLRQLDVKNAFFNGTLSEVVYMKQPAGFTHPD 5
             TIR VL +AV   W L+QLDV NAF  GTL+E VYM QP GF   D
Sbjct: 1038 TTIRVVLDVAVKKNWPLKQLDVNNAFLQGTLTEEVYMAQPPGFVDKD 1084


>emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]
          Length = 1044

 Score =  191 bits (485), Expect = 1e-46
 Identities = 89/172 (51%), Positives = 125/172 (72%), Gaps = 3/172 (1%)
 Frame = -3

Query: 508  THAMVTRSRNDITKPKKLTSLSASIIPSPFLHTPTCFTEAIKLPHWQQAMAEEFNALTQQ 329
            TH+M TRS N+I KPK+L ++S   +P P    PTC T+A+  P W +AM+ E  AL + 
Sbjct: 491  THSMTTRSMNNIFKPKQLHTVSKHYLPLPL--EPTCVTQAVSHPEWXEAMSSELTALMRH 548

Query: 328  HTWDLVPPNSTHNLIGSKWIFRVKLKANGTLDKYKAQLVAQGFKQQHGIDFDQTFSPVIK 149
             TWDL+PP    + +G KW+FRVK K +G++DK+KA+LVA+G+ QQ G+D+++TFSPV+K
Sbjct: 549  GTWDLIPPPINCHPVGCKWVFRVKRKVDGSVDKFKARLVAKGYNQQPGVDYNETFSPVVK 608

Query: 148  HATIRTVLTIAVSNKWSLRQLDVKNAFFNGTLSEVVYMKQPAGF---THPDF 2
             ATIRT+L+IA+ N W L+Q+DV NAF +G L+E VYM QP GF   + PD+
Sbjct: 609  PATIRTMLSIAIMNGWPLKQMDVNNAFLHGNLTETVYMMQPPGFKDLSRPDY 660


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  186 bits (471), Expect = 6e-45
 Identities = 83/166 (50%), Positives = 124/166 (74%)
 Frame = -3

Query: 499  MVTRSRNDITKPKKLTSLSASIIPSPFLHTPTCFTEAIKLPHWQQAMAEEFNALTQQHTW 320
            +VTRS++ I+KP    ++ ++++  P    PTC+T+A K P W++AM  EF AL Q  TW
Sbjct: 846  IVTRSKHGISKPNPKYAMHSTLLALPL--EPTCYTQAAKYPEWREAMDHEFKALQQAGTW 903

Query: 319  DLVPPNSTHNLIGSKWIFRVKLKANGTLDKYKAQLVAQGFKQQHGIDFDQTFSPVIKHAT 140
             LVPP+S  N++ +KW+FR+K +++G++++YKA+LVA GF QQ G+D+ +TFSPV+KH+T
Sbjct: 904  FLVPPSSLMNILPNKWVFRIKKRSDGSVERYKARLVANGFHQQEGLDYTETFSPVVKHST 963

Query: 139  IRTVLTIAVSNKWSLRQLDVKNAFFNGTLSEVVYMKQPAGFTHPDF 2
            IR VL +AVS++W +RQLDV+N F +G L+E +YMKQ  GF  P F
Sbjct: 964  IRLVLALAVSHRWPIRQLDVQNVFLHGYLNEDIYMKQHVGFVDPKF 1009


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  185 bits (470), Expect = 8e-45
 Identities = 92/168 (54%), Positives = 123/168 (73%), Gaps = 4/168 (2%)
 Frame = -3

Query: 493  TRSRNDITKPKKLTSLSASIIPSPFLHT-PTCFTEAIKLPHWQQAMAEEFNALTQQHTWD 317
            TR ++ I+KPK+ T  +     +    T P+  +EA+  P W+ AM  EF AL + +TW 
Sbjct: 896  TRLQHGISKPKQFTDGTVRYGNAAARITEPSSVSEALADPQWRAAMEAEFQALQKNNTWT 955

Query: 316  LVPPNSTHNLIGSKWIFRVKLKANGTLDKYKAQLVAQGFKQQHGIDFDQTFSPVIKHATI 137
            LVPP+ T NLI  KW+F+VK  A+G++D+ KA+LVA+GFKQQ+GID+D TFSPV+KH+TI
Sbjct: 956  LVPPDRTRNLIDCKWVFKVKYNADGSIDRLKARLVAKGFKQQYGIDYDDTFSPVVKHSTI 1015

Query: 136  RTVLTIAVSNKWSLRQLDVKNAFFNGTLSEVVYMKQPAGF---THPDF 2
            R VL++AVS KWSLRQLDV+NAF +G L E VYMKQP GF   THP++
Sbjct: 1016 RLVLSLAVSQKWSLRQLDVQNAFLHGILEETVYMKQPPGFADTTHPNY 1063


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  183 bits (465), Expect = 3e-44
 Identities = 88/167 (52%), Positives = 122/167 (73%)
 Frame = -3

Query: 505  HAMVTRSRNDITKPKKLTSLSASIIPSPFLHTPTCFTEAIKLPHWQQAMAEEFNALTQQH 326
            H M TR++N+ITKP +  +L     P+    TPT  ++A+K  +W+QAM++E++AL +  
Sbjct: 815  HRMTTRAKNNITKPIQKLNLHTHK-PTFQTTTPTSISQALKDQNWRQAMSDEYDALVRNG 873

Query: 325  TWDLVPPNSTHNLIGSKWIFRVKLKANGTLDKYKAQLVAQGFKQQHGIDFDQTFSPVIKH 146
            TW+LVPP    NL+G KWIFR+K  ++G++D+YKA+LVA+GF Q+ G+D+ +TFSPV+K 
Sbjct: 874  TWELVPPEDITNLVGCKWIFRIKRNSDGSIDRYKARLVAKGFHQRPGVDYHETFSPVVKP 933

Query: 145  ATIRTVLTIAVSNKWSLRQLDVKNAFFNGTLSEVVYMKQPAGFTHPD 5
             T+R VL+IAVSN WSLRQLDV NAF  G LSE V+M QP GF   D
Sbjct: 934  TTVRLVLSIAVSNGWSLRQLDVNNAFLQGRLSENVFMAQPPGFVDSD 980