BLASTX nr result
ID: Lithospermum22_contig00012308
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00012308 (2598 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265... 102 7e-19 emb|CBI23047.3| unnamed protein product [Vitis vinifera] 102 7e-19 gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel... 100 3e-18 ref|XP_002515833.1| nucleic acid binding protein, putative [Rici... 97 2e-17 ref|XP_002321981.1| predicted protein [Populus trichocarpa] gi|2... 97 2e-17 >ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera] Length = 229 Score = 102 bits (253), Expect = 7e-19 Identities = 56/86 (65%), Positives = 57/86 (66%) Frame = -3 Query: 2596 GYKEVRLVTKESRHSGGDPLVLCFVDFESPAHAATAMDALQGXXXXXXXXXXXXXXXXXX 2417 GYKEVRLV+KESRHSGGDPLVLCFVDF SPAHAATAMDALQ Sbjct: 155 GYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQ------------------- 195 Query: 2416 XXXXXXXXGYKFDEHDRDSVFLRLQF 2339 GYKFDEHDRDSV LRLQF Sbjct: 196 --------GYKFDEHDRDSVNLRLQF 213 >emb|CBI23047.3| unnamed protein product [Vitis vinifera] Length = 230 Score = 102 bits (253), Expect = 7e-19 Identities = 56/86 (65%), Positives = 57/86 (66%) Frame = -3 Query: 2596 GYKEVRLVTKESRHSGGDPLVLCFVDFESPAHAATAMDALQGXXXXXXXXXXXXXXXXXX 2417 GYKEVRLV+KESRHSGGDPLVLCFVDF SPAHAATAMDALQ Sbjct: 156 GYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQ------------------- 196 Query: 2416 XXXXXXXXGYKFDEHDRDSVFLRLQF 2339 GYKFDEHDRDSV LRLQF Sbjct: 197 --------GYKFDEHDRDSVNLRLQF 214 >gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra] Length = 233 Score = 100 bits (248), Expect = 3e-18 Identities = 55/86 (63%), Positives = 56/86 (65%) Frame = -3 Query: 2596 GYKEVRLVTKESRHSGGDPLVLCFVDFESPAHAATAMDALQGXXXXXXXXXXXXXXXXXX 2417 GYKEVRLV+KESRH GGDPLVLCFVDF SPAHAATAMDALQ Sbjct: 159 GYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAATAMDALQ------------------- 199 Query: 2416 XXXXXXXXGYKFDEHDRDSVFLRLQF 2339 GYKFDEHDRDSV LRLQF Sbjct: 200 --------GYKFDEHDRDSVSLRLQF 217 >ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis] gi|223545062|gb|EEF46575.1| nucleic acid binding protein, putative [Ricinus communis] Length = 232 Score = 97.4 bits (241), Expect = 2e-17 Identities = 54/86 (62%), Positives = 55/86 (63%) Frame = -3 Query: 2596 GYKEVRLVTKESRHSGGDPLVLCFVDFESPAHAATAMDALQGXXXXXXXXXXXXXXXXXX 2417 GYKEVRLV+KESR GGDPLVLCFVDF SPAHAATAMDALQ Sbjct: 158 GYKEVRLVSKESRRPGGDPLVLCFVDFLSPAHAATAMDALQ------------------- 198 Query: 2416 XXXXXXXXGYKFDEHDRDSVFLRLQF 2339 GYKFDEHDRDSV LRLQF Sbjct: 199 --------GYKFDEHDRDSVHLRLQF 216 >ref|XP_002321981.1| predicted protein [Populus trichocarpa] gi|222868977|gb|EEF06108.1| predicted protein [Populus trichocarpa] Length = 220 Score = 97.4 bits (241), Expect = 2e-17 Identities = 53/86 (61%), Positives = 56/86 (65%) Frame = -3 Query: 2596 GYKEVRLVTKESRHSGGDPLVLCFVDFESPAHAATAMDALQGXXXXXXXXXXXXXXXXXX 2417 GYKEVRLV+KESRH GGDPLVLCFVDF SPAHAAT+MDALQ Sbjct: 146 GYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAATSMDALQ------------------- 186 Query: 2416 XXXXXXXXGYKFDEHDRDSVFLRLQF 2339 GY+FDEHDRDSV LRLQF Sbjct: 187 --------GYRFDEHDRDSVDLRLQF 204