BLASTX nr result

ID: Lithospermum22_contig00012308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012308
         (2598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   102   7e-19
emb|CBI23047.3| unnamed protein product [Vitis vinifera]              102   7e-19
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   100   3e-18
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...    97   2e-17
ref|XP_002321981.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-17

>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  102 bits (253), Expect = 7e-19
 Identities = 56/86 (65%), Positives = 57/86 (66%)
 Frame = -3

Query: 2596 GYKEVRLVTKESRHSGGDPLVLCFVDFESPAHAATAMDALQGXXXXXXXXXXXXXXXXXX 2417
            GYKEVRLV+KESRHSGGDPLVLCFVDF SPAHAATAMDALQ                   
Sbjct: 155  GYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQ------------------- 195

Query: 2416 XXXXXXXXGYKFDEHDRDSVFLRLQF 2339
                    GYKFDEHDRDSV LRLQF
Sbjct: 196  --------GYKFDEHDRDSVNLRLQF 213


>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  102 bits (253), Expect = 7e-19
 Identities = 56/86 (65%), Positives = 57/86 (66%)
 Frame = -3

Query: 2596 GYKEVRLVTKESRHSGGDPLVLCFVDFESPAHAATAMDALQGXXXXXXXXXXXXXXXXXX 2417
            GYKEVRLV+KESRHSGGDPLVLCFVDF SPAHAATAMDALQ                   
Sbjct: 156  GYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQ------------------- 196

Query: 2416 XXXXXXXXGYKFDEHDRDSVFLRLQF 2339
                    GYKFDEHDRDSV LRLQF
Sbjct: 197  --------GYKFDEHDRDSVNLRLQF 214


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  100 bits (248), Expect = 3e-18
 Identities = 55/86 (63%), Positives = 56/86 (65%)
 Frame = -3

Query: 2596 GYKEVRLVTKESRHSGGDPLVLCFVDFESPAHAATAMDALQGXXXXXXXXXXXXXXXXXX 2417
            GYKEVRLV+KESRH GGDPLVLCFVDF SPAHAATAMDALQ                   
Sbjct: 159  GYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAATAMDALQ------------------- 199

Query: 2416 XXXXXXXXGYKFDEHDRDSVFLRLQF 2339
                    GYKFDEHDRDSV LRLQF
Sbjct: 200  --------GYKFDEHDRDSVSLRLQF 217


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223545062|gb|EEF46575.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 232

 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 54/86 (62%), Positives = 55/86 (63%)
 Frame = -3

Query: 2596 GYKEVRLVTKESRHSGGDPLVLCFVDFESPAHAATAMDALQGXXXXXXXXXXXXXXXXXX 2417
            GYKEVRLV+KESR  GGDPLVLCFVDF SPAHAATAMDALQ                   
Sbjct: 158  GYKEVRLVSKESRRPGGDPLVLCFVDFLSPAHAATAMDALQ------------------- 198

Query: 2416 XXXXXXXXGYKFDEHDRDSVFLRLQF 2339
                    GYKFDEHDRDSV LRLQF
Sbjct: 199  --------GYKFDEHDRDSVHLRLQF 216


>ref|XP_002321981.1| predicted protein [Populus trichocarpa] gi|222868977|gb|EEF06108.1|
            predicted protein [Populus trichocarpa]
          Length = 220

 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 53/86 (61%), Positives = 56/86 (65%)
 Frame = -3

Query: 2596 GYKEVRLVTKESRHSGGDPLVLCFVDFESPAHAATAMDALQGXXXXXXXXXXXXXXXXXX 2417
            GYKEVRLV+KESRH GGDPLVLCFVDF SPAHAAT+MDALQ                   
Sbjct: 146  GYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAATSMDALQ------------------- 186

Query: 2416 XXXXXXXXGYKFDEHDRDSVFLRLQF 2339
                    GY+FDEHDRDSV LRLQF
Sbjct: 187  --------GYRFDEHDRDSVDLRLQF 204


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