BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012299
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   214   1e-56
ref|XP_003539690.1| PREDICTED: RNA and export factor-binding pro...   208   8e-56
ref|XP_002531375.1| RNA and export factor binding protein, putat...   211   1e-55
ref|XP_003538006.1| PREDICTED: RNA and export factor-binding pro...   206   3e-55
ref|XP_003606654.1| THO complex subunit [Medicago truncatula] gi...   206   8e-54

>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  214 bits (546), Expect(2) = 1e-56
 Identities = 117/189 (61%), Positives = 134/189 (70%), Gaps = 2/189 (1%)
 Frame = -2

Query: 916 ESTWQHDMFGTDGYSAPS-AGRAGSIETGTKLYISNLDYGVSNEDVKELFSEIGDLKRCT 740
           E+TWQHDMF     + P+ AGR  +IETGTKLYISNLDYGVSNED+KELFSE+GDLKR +
Sbjct: 58  ETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYS 117

Query: 739 VHYDRSGRSKGTAEIVFSRRQDAVAAVKRYNNVQLDGNPMKIEIVGTNVSTPAAGGPL-N 563
           +HYDRSGRSKGTAE+VFSRR DAVAAVKRYNNVQLDG PMKIEIVGTN++TPAA  P+ N
Sbjct: 118 IHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTN 177

Query: 562 RSFGDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEKVSADDLDADLEK 383
            +FG++N                                     R EKVSA+DLDADLEK
Sbjct: 178 GTFGNSN---GGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEK 234

Query: 382 YHSEAMETN 356
           YHSEAM+ N
Sbjct: 235 YHSEAMQIN 243



 Score = 32.7 bits (73), Expect(2) = 1e-56
 Identities = 14/22 (63%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = -1

Query: 1043 LPNRATNRAAPYS-TKVPESTW 981
            LPNR  NR  PYS +K PE+TW
Sbjct: 40   LPNRGANRITPYSVSKAPETTW 61


>ref|XP_003539690.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
           max]
          Length = 247

 Score =  208 bits (530), Expect(2) = 8e-56
 Identities = 113/192 (58%), Positives = 127/192 (66%), Gaps = 5/192 (2%)
 Frame = -2

Query: 916 ESTWQHDMFGTD-----GYSAPSAGRAGSIETGTKLYISNLDYGVSNEDVKELFSEIGDL 752
           E+TWQHD++        GY A   GRA SIETGTKLYISNLDYGVSN+D+KELF+E+GDL
Sbjct: 57  EATWQHDLYADQHVAAAGYPA-QGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDL 115

Query: 751 KRCTVHYDRSGRSKGTAEIVFSRRQDAVAAVKRYNNVQLDGNPMKIEIVGTNVSTPAAGG 572
           KR  VHYDRSGRSKGTAE+VFSRR DAV+AVKRYNNVQLDG PMKIEIVGTN+STP    
Sbjct: 116 KRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVAP 175

Query: 571 PLNRSFGDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEKVSADDLDAD 392
             N + G+ N                                     R EKVSADDLDAD
Sbjct: 176 APNGAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDAD 235

Query: 391 LEKYHSEAMETN 356
           LEKYH+EAM+ N
Sbjct: 236 LEKYHAEAMQLN 247



 Score = 36.2 bits (82), Expect(2) = 8e-56
 Identities = 16/22 (72%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
 Frame = -1

Query: 1043 LPNRATNRAAPYS-TKVPESTW 981
            LPNRA NRAAPY+  K PE+TW
Sbjct: 39   LPNRAANRAAPYAPAKAPEATW 60


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223529035|gb|EEF31023.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 247

 Score =  211 bits (536), Expect(2) = 1e-55
 Identities = 116/193 (60%), Positives = 130/193 (67%), Gaps = 6/193 (3%)
 Frame = -2

Query: 916 ESTWQHDMFGTDGYSAPSAG------RAGSIETGTKLYISNLDYGVSNEDVKELFSEIGD 755
           ESTWQHDMF   G      G      RA  IETGTKLYISNL+YGVSNED+KELFSE+GD
Sbjct: 57  ESTWQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGD 116

Query: 754 LKRCTVHYDRSGRSKGTAEIVFSRRQDAVAAVKRYNNVQLDGNPMKIEIVGTNVSTPAAG 575
           LKR ++HYDRSGRSKGTAE+VFSRR DA+AAVKRYNNVQLDG PMKIEIVGTN++TPAA 
Sbjct: 117 LKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAAT 176

Query: 574 GPLNRSFGDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEKVSADDLDA 395
              N +FG++N                                     R EKVSA+DLDA
Sbjct: 177 PAANGNFGNSN--GAPRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDA 234

Query: 394 DLEKYHSEAMETN 356
           DLEKYHSEAM+TN
Sbjct: 235 DLEKYHSEAMQTN 247



 Score = 33.5 bits (75), Expect(2) = 1e-55
 Identities = 15/20 (75%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = -1

Query: 1037 NRATNRAAPY-STKVPESTW 981
            NR TNRAAPY + K PESTW
Sbjct: 41   NRGTNRAAPYAAAKAPESTW 60


>ref|XP_003538006.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
           max]
          Length = 247

 Score =  206 bits (524), Expect(2) = 3e-55
 Identities = 112/192 (58%), Positives = 127/192 (66%), Gaps = 5/192 (2%)
 Frame = -2

Query: 916 ESTWQHDMFGTD-----GYSAPSAGRAGSIETGTKLYISNLDYGVSNEDVKELFSEIGDL 752
           E+TWQHD++        GY A   GRA SIETGTKLYISNLDYGVS++D+KELF+E+GDL
Sbjct: 57  EATWQHDLYADQQVAAAGYPA-QGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDL 115

Query: 751 KRCTVHYDRSGRSKGTAEIVFSRRQDAVAAVKRYNNVQLDGNPMKIEIVGTNVSTPAAGG 572
           KR  VHYDRSGRSKGTAE+VFSRR DAVAAVKRYNNVQLDG PMKIEIVGTN+STP    
Sbjct: 116 KRHAVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAP 175

Query: 571 PLNRSFGDANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEKVSADDLDAD 392
             N + G+ +                                     R EKVSADDLDAD
Sbjct: 176 ARNGAIGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDAD 235

Query: 391 LEKYHSEAMETN 356
           LEKYH+EAM+ N
Sbjct: 236 LEKYHAEAMQLN 247



 Score = 36.6 bits (83), Expect(2) = 3e-55
 Identities = 16/21 (76%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
 Frame = -1

Query: 1040 PNRATNRAAPYST-KVPESTW 981
            PNRA NRAAPY+T K PE+TW
Sbjct: 40   PNRAANRAAPYATAKAPEATW 60


>ref|XP_003606654.1| THO complex subunit [Medicago truncatula]
           gi|355507709|gb|AES88851.1| THO complex subunit
           [Medicago truncatula]
          Length = 376

 Score =  206 bits (523), Expect(2) = 8e-54
 Identities = 114/203 (56%), Positives = 129/203 (63%), Gaps = 16/203 (7%)
 Frame = -2

Query: 916 ESTWQHDMFGTD-----GYSAPSAGRAGSIETGTKLYISNLDYGVSNEDVKELFSEIGDL 752
           E+TWQHD++         Y A   GRA SIETGTKLYISNLDYGVSN+D+KELFSE+GDL
Sbjct: 174 ETTWQHDLYADQHVAAAAYPAAQGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGDL 233

Query: 751 KRCTVHYDRSGRSKGTAEIVFSRRQDAVAAVKRYNNVQLDGNPMKIEIVGTNVSTPAAGG 572
           KR  VHYDRSGRSKGTAE+VFSRRQDAVAAVKRYNNVQLDG PMKIEIVGTN+STP A  
Sbjct: 234 KRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGAAP 293

Query: 571 PLNRSFGDAN-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRD 425
            +N   G+ N                                                RD
Sbjct: 294 VVNAPIGNFNGIPQSGQGRVGEFRGPGGRGQGIRRNRGRGRGSGGPRGGGRGGGRGRGRD 353

Query: 424 EKVSADDLDADLEKYHSEAMETN 356
           +KVSA+DLDA+LEKYH+EAM+ N
Sbjct: 354 DKVSAEDLDAELEKYHAEAMQLN 376



 Score = 32.3 bits (72), Expect(2) = 8e-54
 Identities = 15/20 (75%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = -1

Query: 1037 NRATNRAAPYS-TKVPESTW 981
            NRA NRAAPYS  K PE+TW
Sbjct: 158  NRAGNRAAPYSAAKAPETTW 177