BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012284
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation fa...   106   2e-21
ref|XP_002873722.1| U-box domain-containing protein [Arabidopsis...    95   5e-18
gb|ABG89128.1| UFD2 [synthetic construct]                              95   5e-18
ref|NP_568313.2| putative ubiquitin conjugation factor E4 [Arabi...    95   5e-18
ref|XP_004136686.1| PREDICTED: probable ubiquitin conjugation fa...    94   9e-18

>ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Vitis
           vinifera] gi|296082973|emb|CBI22274.3| unnamed protein
           product [Vitis vinifera]
          Length = 1037

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/65 (84%), Positives = 60/65 (92%)
 Frame = -1

Query: 197 KPQRSPSEIEDIILGKIFLVSLQDSMENDSRVVFLEMTAAEILSEGFDLKLSRNLMERIL 18
           KPQ SP EIEDIILGKIFLVSL DSME+DSR+V+LEMTAAEILSEG  LKLSR+LMER+L
Sbjct: 5   KPQLSPDEIEDIILGKIFLVSLNDSMESDSRIVYLEMTAAEILSEGRPLKLSRDLMERVL 64

Query: 17  IDRLS 3
           IDRLS
Sbjct: 65  IDRLS 69


>ref|XP_002873722.1| U-box domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319559|gb|EFH49981.1| U-box domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1038

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/67 (71%), Positives = 60/67 (89%)
 Frame = -1

Query: 203 STKPQRSPSEIEDIILGKIFLVSLQDSMENDSRVVFLEMTAAEILSEGFDLKLSRNLMER 24
           ++KPQRSP+EIEDIIL KIF V+L +S ++D R+V+LEMTAAEILSEG +L LSR+LMER
Sbjct: 3   TSKPQRSPAEIEDIILRKIFYVTLTESADSDPRIVYLEMTAAEILSEGKELLLSRDLMER 62

Query: 23  ILIDRLS 3
           +LIDRLS
Sbjct: 63  VLIDRLS 69


>gb|ABG89128.1| UFD2 [synthetic construct]
          Length = 1037

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/67 (71%), Positives = 60/67 (89%)
 Frame = -1

Query: 203 STKPQRSPSEIEDIILGKIFLVSLQDSMENDSRVVFLEMTAAEILSEGFDLKLSRNLMER 24
           ++KPQRSP+EIEDIIL KIF V+L +S ++D R+V+LEMTAAEILSEG +L LSR+LMER
Sbjct: 3   TSKPQRSPAEIEDIILRKIFYVTLTESTDSDPRIVYLEMTAAEILSEGKELLLSRDLMER 62

Query: 23  ILIDRLS 3
           +LIDRLS
Sbjct: 63  VLIDRLS 69


>ref|NP_568313.2| putative ubiquitin conjugation factor E4 [Arabidopsis thaliana]
           gi|75174048|sp|Q9LF41.1|UBE4_ARATH RecName:
           Full=Probable ubiquitin conjugation factor E4; AltName:
           Full=Plant U-box protein 1; AltName: Full=U-box
           domain-containing protein 1; AltName:
           Full=Ubiquitin-fusion degradation protein 2-like;
           Short=UB fusion protein 2-like
           gi|9755795|emb|CAC01739.1| ubiquitin-fusion degradation
           protein-like [Arabidopsis thaliana]
           gi|332004773|gb|AED92156.1| putative ubiquitin
           conjugation factor E4 [Arabidopsis thaliana]
          Length = 1038

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/67 (71%), Positives = 60/67 (89%)
 Frame = -1

Query: 203 STKPQRSPSEIEDIILGKIFLVSLQDSMENDSRVVFLEMTAAEILSEGFDLKLSRNLMER 24
           ++KPQRSP+EIEDIIL KIF V+L +S ++D R+V+LEMTAAEILSEG +L LSR+LMER
Sbjct: 3   TSKPQRSPAEIEDIILRKIFYVTLTESTDSDPRIVYLEMTAAEILSEGKELLLSRDLMER 62

Query: 23  ILIDRLS 3
           +LIDRLS
Sbjct: 63  VLIDRLS 69


>ref|XP_004136686.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Cucumis
           sativus] gi|449494681|ref|XP_004159617.1| PREDICTED:
           probable ubiquitin conjugation factor E4-like [Cucumis
           sativus]
          Length = 1043

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/67 (65%), Positives = 60/67 (89%)
 Frame = -1

Query: 203 STKPQRSPSEIEDIILGKIFLVSLQDSMENDSRVVFLEMTAAEILSEGFDLKLSRNLMER 24
           ++KPQRSP E+EDIIL K+FL+SL D+ ++DSR+V+LE TAAE+LSEG  L++SR++MER
Sbjct: 3   TSKPQRSPEEVEDIILRKVFLISLTDTSDSDSRIVYLEQTAAELLSEGKPLRISRDVMER 62

Query: 23  ILIDRLS 3
           I+IDRLS
Sbjct: 63  IIIDRLS 69