BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012267
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   251   4e-83
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]      253   1e-80
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   248   2e-80
ref|XP_002331109.1| predicted protein [Populus trichocarpa] gi|2...   251   9e-80
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-lik...   252   1e-79

>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
           gi|297739525|emb|CBI29707.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  251 bits (642), Expect(2) = 4e-83
 Identities = 132/197 (67%), Positives = 147/197 (74%), Gaps = 25/197 (12%)
 Frame = -3

Query: 761 YFYRLLSGPEALSTFEKDRAWHVPEEIDILAMQEACKVLVGQHDFSSFRAAGCEAKSPIR 582
           YFYRLLSGPE LS+FEKDRAWHVPE++D+LAMQ+AC+VLVG HDFSSFRAAGC+AKSPIR
Sbjct: 184 YFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSSFRAAGCQAKSPIR 243

Query: 581 TLEELSVIEVTSTPYFPSIFERKQLGINFAGDL-------------------------AN 477
           TL+EL V EV  TPYFPSI ER Q        L                         A 
Sbjct: 244 TLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTANHDRLDGFNGAG 303

Query: 476 EEFGMRRRNQCLVVTARSRSFLYHQVRLLVGVLKSVGTGDLTVLDVERILKAKTVTAASP 297
           + FG+RRR++C +VTAR+RSFLYHQVRLLVGV+K VGTGDLTV DVERIL AKTVTAASP
Sbjct: 304 QGFGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNAKTVTAASP 363

Query: 296 MAPAGGLYLGQVKYDLP 246
           MAPA GLYLG V YDLP
Sbjct: 364 MAPACGLYLGNVNYDLP 380



 Score = 84.0 bits (206), Expect(2) = 4e-83
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -1

Query: 952 LPPHDPAVVKRAVNHFLQKNEGDISVIDVRSVPPNFHSRYQAIERT 815
           LPPH+PAVV+RAVNHFLQKNEGD+ VIDVR VPP+FH+RY+A ERT
Sbjct: 138 LPPHEPAVVRRAVNHFLQKNEGDVMVIDVRCVPPDFHARYKARERT 183


>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  253 bits (646), Expect(2) = 1e-80
 Identities = 132/198 (66%), Positives = 153/198 (77%), Gaps = 26/198 (13%)
 Frame = -3

Query: 761 YFYRLLSGPEALSTFEKDRAWHVPEEIDILAMQEACKVLVGQHDFSSFRAAGCEAKSPIR 582
           YFYRLLSGPE LSTFEKDRAWH+PEE+++ AMQEACKVLVG HDFSSFRA+GC+AKSPIR
Sbjct: 164 YFYRLLSGPETLSTFEKDRAWHIPEELNLPAMQEACKVLVGHHDFSSFRASGCQAKSPIR 223

Query: 581 TLEELSVIEVTSTPYFPSIFERKQLGINFAGDL----ANEE------------------- 471
           +L+ELSV+EVT +PYFPS+ +R+   IN   DL    +N E                   
Sbjct: 224 SLDELSVVEVTRSPYFPSVMDREN-PINVTDDLHCFHSNSETVIPLGSSARIDEVSASKE 282

Query: 470 ---FGMRRRNQCLVVTARSRSFLYHQVRLLVGVLKSVGTGDLTVLDVERILKAKTVTAAS 300
              FG RR ++CLVVTAR+R+FLYHQVRLLVGVLK VGTG++TV DVERIL AKTVTA S
Sbjct: 283 DVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNITVTDVERILNAKTVTATS 342

Query: 299 PMAPAGGLYLGQVKYDLP 246
           PMAPA GLYLG+VKYDLP
Sbjct: 343 PMAPACGLYLGEVKYDLP 360



 Score = 73.9 bits (180), Expect(2) = 1e-80
 Identities = 33/46 (71%), Positives = 40/46 (86%)
 Frame = -1

Query: 952 LPPHDPAVVKRAVNHFLQKNEGDISVIDVRSVPPNFHSRYQAIERT 815
           L PH+PAVV+RAVNHFLQK  GD++VIDVR VP +FH+RY+A ERT
Sbjct: 118 LQPHEPAVVRRAVNHFLQKENGDLAVIDVRCVPSDFHARYKAQERT 163


>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 372

 Score =  248 bits (634), Expect(2) = 2e-80
 Identities = 133/197 (67%), Positives = 149/197 (75%), Gaps = 25/197 (12%)
 Frame = -3

Query: 761 YFYRLLSGPEALSTFEKDRAWHVPEEIDILAMQEACKVLVGQHDFSSFRAAGCEAKSPIR 582
           YFYR LSGPE LSTFEKDRAWHV E++DI+AMQEACKVLVG HDFSSFRA+GC+AKSPIR
Sbjct: 176 YFYRFLSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVLVGHHDFSSFRASGCQAKSPIR 235

Query: 581 TLEELSVIEVTSTPYFPSIFERKQ------------------LGINFAGDLANEE----- 471
           TL E+SV EV ST YFPSI ER+Q                  +G +   ++A        
Sbjct: 236 TLAEISVSEVASTLYFPSITEREQNCENGENSCCKKFKTDLPMGSHSNTNVAESSFGETD 295

Query: 470 --FGMRRRNQCLVVTARSRSFLYHQVRLLVGVLKSVGTGDLTVLDVERILKAKTVTAASP 297
             FG+RRR++C VVTAR+RSFLYHQVRLLVGVLKSVG GDLT  DVERIL AK+VTAASP
Sbjct: 296 LGFGIRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGIGDLTTSDVERILSAKSVTAASP 355

Query: 296 MAPAGGLYLGQVKYDLP 246
           MAPA GLYLG VKYDLP
Sbjct: 356 MAPARGLYLGHVKYDLP 372



 Score = 77.8 bits (190), Expect(2) = 2e-80
 Identities = 35/46 (76%), Positives = 41/46 (89%)
 Frame = -1

Query: 952 LPPHDPAVVKRAVNHFLQKNEGDISVIDVRSVPPNFHSRYQAIERT 815
           LPPH+PAVV+RAVNHFLQKNEGDI V DVR VP +FH+R++A ERT
Sbjct: 130 LPPHEPAVVRRAVNHFLQKNEGDIMVTDVRCVPSDFHARFKAQERT 175


>ref|XP_002331109.1| predicted protein [Populus trichocarpa] gi|222872837|gb|EEF09968.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  251 bits (641), Expect(2) = 9e-80
 Identities = 132/197 (67%), Positives = 150/197 (76%), Gaps = 27/197 (13%)
 Frame = -3

Query: 761 YFYRLLSGPEALSTFEKDRAWHVPEEIDILAMQEACKVLVGQHDFSSFRAAGCEAKSPIR 582
           YFYRLL GPE LSTFEKDRAWHV EE+D+++MQEACKVLVG HDFSSFRA+GC+AKSP R
Sbjct: 128 YFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVGHHDFSSFRASGCQAKSPFR 187

Query: 581 TLEELSVIEVTSTPYFPSIFERKQLGINF---------------AGDLANE--------- 474
           TLEELSV+EV STPYFPSI ER+Q   N                 G ++N          
Sbjct: 188 TLEELSVLEVVSTPYFPSITEREQNSSNGEGPHSFHNKCKTGLPTGSISNGFMAGGSNSG 247

Query: 473 ---EFGMRRRNQCLVVTARSRSFLYHQVRLLVGVLKSVGTGDLTVLDVERILKAKTVTAA 303
               FG+RRR++C V+TARSRSFLYHQVRLLVGVLKSVGTGDLTV DVERIL A+++TAA
Sbjct: 248 TDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILNARSITAA 307

Query: 302 SPMAPAGGLYLGQVKYD 252
           SPMAPA GLYLG VKY+
Sbjct: 308 SPMAPACGLYLGHVKYE 324



 Score = 73.2 bits (178), Expect(2) = 9e-80
 Identities = 33/46 (71%), Positives = 40/46 (86%)
 Frame = -1

Query: 952 LPPHDPAVVKRAVNHFLQKNEGDISVIDVRSVPPNFHSRYQAIERT 815
           LPPH+PAVV++AVNHFLQK EGDI V DVRSV  +FH+R++A ERT
Sbjct: 82  LPPHEPAVVRKAVNHFLQKKEGDIMVTDVRSVSAHFHARFKAQERT 127


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max]
          Length = 369

 Score =  252 bits (643), Expect(2) = 1e-79
 Identities = 135/198 (68%), Positives = 152/198 (76%), Gaps = 26/198 (13%)
 Frame = -3

Query: 761 YFYRLLSGPEALSTFEKDRAWHVPEEIDILAMQEACKVLVGQHDFSSFRAAGCEAKSPIR 582
           YFYRLLSGPE LSTFEKDRAWHVPEE+ + AMQEAC+VLVG HDFSSFRAAGC+AKSPIR
Sbjct: 171 YFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGCHDFSSFRAAGCQAKSPIR 230

Query: 581 TLEELSVIEVTSTPYFPSIFERKQLGINFAGDLA----NEE------------------- 471
           TL+ELSV EV  +PYFPS+ +R+Q     +GDL     N E                   
Sbjct: 231 TLDELSVNEVIESPYFPSLMDREQHN-KVSGDLRSCSNNTETDIPPISNPSIDKVITSSQ 289

Query: 470 ---FGMRRRNQCLVVTARSRSFLYHQVRLLVGVLKSVGTGDLTVLDVERILKAKTVTAAS 300
              FG RRR++CLVVTAR+RSFLYHQVRLLVGVLK+ GTG+LT+ DVERIL AKTVTAAS
Sbjct: 290 DAGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAAGTGNLTIPDVERILNAKTVTAAS 349

Query: 299 PMAPAGGLYLGQVKYDLP 246
           PMAPA GLYLG+VKYDLP
Sbjct: 350 PMAPACGLYLGEVKYDLP 367



 Score = 72.0 bits (175), Expect(2) = 1e-79
 Identities = 32/46 (69%), Positives = 40/46 (86%)
 Frame = -1

Query: 952 LPPHDPAVVKRAVNHFLQKNEGDISVIDVRSVPPNFHSRYQAIERT 815
           LPPH+PAVV RAVNHFLQK++ D+ VIDVR VP +FH+R++A ERT
Sbjct: 125 LPPHEPAVVGRAVNHFLQKHDSDLMVIDVRCVPSDFHARFKAQERT 170