BLASTX nr result

ID: Lithospermum22_contig00012253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012253
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   298   8e-79
ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|2...   290   2e-76
ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycin...   290   2e-76
ref|XP_004147701.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   286   2e-75
ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   286   3e-75

>ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|296086279|emb|CBI31720.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  298 bits (763), Expect = 8e-79
 Identities = 147/217 (67%), Positives = 174/217 (80%)
 Frame = +2

Query: 68  DVAKDAGGNGEQVVVETSRTMVDNNYESKENLEPCTKVYVGGIPFYSTEDDIRSCFEGCG 247
           DV  + G  G  VV ET++       +S+EN +   KVYVGGIP+YSTEDDIRS F+ CG
Sbjct: 154 DVENEGGEKG--VVKETAQIS-----DSQENGDASNKVYVGGIPYYSTEDDIRSYFDSCG 206

Query: 248 SITEIDCMKFPESGKFRGIAIITFKTEAASERALALDGSDMGGLYLKIQPYKSERTNKAS 427
           +ITE+DCM FPESGKFRGIAII+FKTEAA++RALALDG+DMGGL+LKIQPYK+ R NK+S
Sbjct: 207 TITEVDCMMFPESGKFRGIAIISFKTEAAAKRALALDGADMGGLFLKIQPYKTTRANKSS 266

Query: 428 PFAPAIVEGYNRIYVGNLAWDITEDDVRNLFSSCNIASIRFGRDKETMEFKGYGHVDFAD 607
            FAP +VEGYNRIYVGNL WDITED+VR  FS CN++SIRFG DKET EF+GY HVDF+D
Sbjct: 267 DFAPEMVEGYNRIYVGNLPWDITEDEVRKFFSRCNVSSIRFGMDKETQEFRGYAHVDFSD 326

Query: 608 SESVKTALKLDQNVVCGRPIRISCAVAKKGAITGSTP 718
           + S+  ALKLDQ +VCGRP +I CAV KKGA   STP
Sbjct: 327 NPSLTMALKLDQEIVCGRPAKIRCAVPKKGAKDYSTP 363


>ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|222865346|gb|EEF02477.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  290 bits (743), Expect = 2e-76
 Identities = 143/205 (69%), Positives = 168/205 (81%)
 Frame = +2

Query: 83  AGGNGEQVVVETSRTMVDNNYESKENLEPCTKVYVGGIPFYSTEDDIRSCFEGCGSITEI 262
           AGG  E VV E ++       ESK + +   +VYVGGIP+YSTEDDIRS FEGCG+ITE+
Sbjct: 170 AGGEAEGVV-EAAKVAG----ESKISEDIADRVYVGGIPYYSTEDDIRSFFEGCGTITEV 224

Query: 263 DCMKFPESGKFRGIAIITFKTEAASERALALDGSDMGGLYLKIQPYKSERTNKASPFAPA 442
           DCM FP+SGKFRGIAII+FKTEAA++RAL LDGSDMGG YLKIQPYK+ + NK   FAP 
Sbjct: 225 DCMTFPDSGKFRGIAIISFKTEAAAKRALDLDGSDMGGFYLKIQPYKTTKVNKEPNFAPG 284

Query: 443 IVEGYNRIYVGNLAWDITEDDVRNLFSSCNIASIRFGRDKETMEFKGYGHVDFADSESVK 622
           IVEGYNRIYVGNL+WDITEDD++  FS C I+SIRFG DKET EF+GYGHVDF+D++S+ 
Sbjct: 285 IVEGYNRIYVGNLSWDITEDDLKKFFSDCKISSIRFGMDKETGEFRGYGHVDFSDNDSLV 344

Query: 623 TALKLDQNVVCGRPIRISCAVAKKG 697
            ALKLDQ +VCGRPI+ISCAV KKG
Sbjct: 345 KALKLDQRIVCGRPIKISCAVPKKG 369


>ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
           gi|255644669|gb|ACU22837.1| unknown [Glycine max]
          Length = 411

 Score =  290 bits (742), Expect = 2e-76
 Identities = 146/229 (63%), Positives = 176/229 (76%), Gaps = 5/229 (2%)
 Frame = +2

Query: 44  ENGGLEKIDVAKDAGGNGEQVVVETSRTMVDNNYESKENLEPCT--KVYVGGIPFYSTED 217
           +N   +K   A++   NG   + E +     N   SK+N +  T  K YVGGIP+YSTED
Sbjct: 121 KNKNKKKSTTAEENESNGGGEMPEATELTKTNTTTSKDNGDAPTNTKAYVGGIPYYSTED 180

Query: 218 DIRSCFEGCGSITEIDCMKFPESGKFRGIAIITFKTEAASERALALDGSDMGGLYLKIQP 397
           DIRS FE CG+ITE+DCM FPE+GKFRGIAIITFKTEAA++RALALDG+DMGGL+LKIQP
Sbjct: 181 DIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALDGADMGGLFLKIQP 240

Query: 398 YKSERTNKASPFAPAIVEGYNRIYVGNLAWDITEDDVRNLFSSCNIASIRFGRDKETMEF 577
           YK+ R NKAS FAP I+EGYNRIYVGNL+WDITE+++R  F+ C I S+RFG DKET EF
Sbjct: 241 YKATRANKASDFAPEILEGYNRIYVGNLSWDITEEELRKFFNGCEITSLRFGMDKETGEF 300

Query: 578 KGYGHVDFADSESVKTALKLDQNVVCGRPIRISCAV---AKKGAITGST 715
           +GY HVDF+DS+S+KTAL LDQNV+ GRP+RISCAV    K G  T ST
Sbjct: 301 RGYAHVDFSDSQSLKTALALDQNVLFGRPVRISCAVPLKKKTGTHTSST 349


>ref|XP_004147701.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 432

 Score =  286 bits (733), Expect = 2e-75
 Identities = 142/228 (62%), Positives = 173/228 (75%), Gaps = 6/228 (2%)
 Frame = +2

Query: 44  ENGGLEKIDVAKD------AGGNGEQVVVETSRTMVDNNYESKENLEPCTKVYVGGIPFY 205
           EN G E+ +  KD         +G  V  +   T  +   E  ENL   TKVYVGGIP+Y
Sbjct: 141 ENNGEEEKEKEKDKEKEKQGDVSGNDVKGQVEETHYNIGSEFDENL--ATKVYVGGIPYY 198

Query: 206 STEDDIRSCFEGCGSITEIDCMKFPESGKFRGIAIITFKTEAASERALALDGSDMGGLYL 385
           STEDDI S FE CG+ITEIDCMKFPESGKFRGIAI++FKTEAA++RALA DG+DMGGL+L
Sbjct: 199 STEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDGADMGGLFL 258

Query: 386 KIQPYKSERTNKASPFAPAIVEGYNRIYVGNLAWDITEDDVRNLFSSCNIASIRFGRDKE 565
           K+QPYK  R N+A+ F+P +VEGYNRIY+GNL+WD+TEDD++ LF +C IASIRFG DKE
Sbjct: 259 KVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIASIRFGMDKE 318

Query: 566 TMEFKGYGHVDFADSESVKTALKLDQNVVCGRPIRISCAVAKKGAITG 709
           T EF+GY HVDF+D  S+KTALKLDQ ++ GRP++I CAV KKG   G
Sbjct: 319 TGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENG 366


>ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 432

 Score =  286 bits (732), Expect = 3e-75
 Identities = 142/230 (61%), Positives = 176/230 (76%), Gaps = 8/230 (3%)
 Frame = +2

Query: 44  ENGGLEKIDVAK--------DAGGNGEQVVVETSRTMVDNNYESKENLEPCTKVYVGGIP 199
           EN G E+ +  K        D  GN  +  VE +   + + ++  ENL   TKVYVGGIP
Sbjct: 141 ENNGEEEKEKEKEKEKEKQGDVSGNDVKGQVEETHYNIGSEFD--ENL--ATKVYVGGIP 196

Query: 200 FYSTEDDIRSCFEGCGSITEIDCMKFPESGKFRGIAIITFKTEAASERALALDGSDMGGL 379
           +YSTEDDI S FE CG+ITEIDCMKFPESGKFRGIAI++FKTEAA++RALA DG+DMGGL
Sbjct: 197 YYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRALACDGADMGGL 256

Query: 380 YLKIQPYKSERTNKASPFAPAIVEGYNRIYVGNLAWDITEDDVRNLFSSCNIASIRFGRD 559
           +LK+QPYK  R N+A+ F+P +VEGYNRIY+GNL+WD+TEDD++ LF +C IASIRFG D
Sbjct: 257 FLKVQPYKGTRKNRAADFSPGLVEGYNRIYIGNLSWDVTEDDLKKLFVNCKIASIRFGMD 316

Query: 560 KETMEFKGYGHVDFADSESVKTALKLDQNVVCGRPIRISCAVAKKGAITG 709
           KET EF+GY HVDF+D  S+KTALKLDQ ++ GRP++I CAV KKG   G
Sbjct: 317 KETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENG 366


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