BLASTX nr result
ID: Lithospermum22_contig00012174
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00012174
(752 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517947.1| pre-mRNA splicing factor, putative [Ricinus ... 290 2e-76
ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like... 287 1e-75
ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like... 285 5e-75
emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera] 285 5e-75
gb|AFW56581.1| hypothetical protein ZEAMMB73_917811 [Zea mays] 285 9e-75
>ref|XP_002517947.1| pre-mRNA splicing factor, putative [Ricinus communis]
gi|223542929|gb|EEF44465.1| pre-mRNA splicing factor,
putative [Ricinus communis]
Length = 1031
Score = 290 bits (742), Expect = 2e-76
Identities = 150/218 (68%), Positives = 161/218 (73%), Gaps = 4/218 (1%)
Frame = +1
Query: 109 RLEFLNTKPPSNYVAGLGRGATGFTTRSDIGPARSAPDLPDRXXXXXXXXXXXXXXXXXX 288
RL+FLN+KPP NYVAGLGRGATGFTTRSDIGPAR+APDLPDR
Sbjct: 95 RLDFLNSKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSAVAIGAAGGAAGAGMGR 154
Query: 289 XXXXXXXXXXXXXXXXX----NQKFDEFEGNDVGLFXXXXXXXXXXXXXXIWEAIDQRMD 456
NQKFDEFEGNDVGLF +WEAID+RMD
Sbjct: 155 GRGKGGEEDDEDDGDEKGYDENQKFDEFEGNDVGLFASAEYDEDDKEADAVWEAIDKRMD 214
Query: 457 SRRKDRREARLKEEIEKYRASNPKITEQFADLKRKLHTLSTEDWDSIPEIGDYSLRNKKK 636
SRRKDRREARLKEEIEKYRASNPKITEQFADLKRKLHTLS E+W+SIP+IGDYSLRNKKK
Sbjct: 215 SRRKDRREARLKEEIEKYRASNPKITEQFADLKRKLHTLSAEEWESIPDIGDYSLRNKKK 274
Query: 637 KFESFVPVPDTMLEKARQEKEHVTALDPKSRGVGGAET 750
+FESFVPVPDT+LEKARQE+EHVTALDPKSR GGAET
Sbjct: 275 RFESFVPVPDTLLEKARQEQEHVTALDPKSRAAGGAET 312
>ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like [Cucumis sativus]
gi|449514699|ref|XP_004164455.1| PREDICTED:
pre-mRNA-processing factor 6-like [Cucumis sativus]
Length = 1023
Score = 287 bits (735), Expect = 1e-75
Identities = 148/215 (68%), Positives = 160/215 (74%), Gaps = 1/215 (0%)
Frame = +1
Query: 109 RLEFLNTKPPSNYVAGLGRGATGFTTRSDIGPARSAPDLPDRXXXXXXXXXXXXXXXXXX 288
RL+FLN+KPP NYVAGLGRGATGFTTRSDIGPAR+APDLPDR
Sbjct: 90 RLDFLNSKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSATTIGGAAAAPPGRGRG 149
Query: 289 XXXXXXXXXXXXXXXXX-NQKFDEFEGNDVGLFXXXXXXXXXXXXXXIWEAIDQRMDSRR 465
NQKFDEFEGNDVGLF +WEAID+RMDSRR
Sbjct: 150 KGGEEEEEDEGEDKGYDENQKFDEFEGNDVGLFASAEYDEDDKEADAVWEAIDKRMDSRR 209
Query: 466 KDRREARLKEEIEKYRASNPKITEQFADLKRKLHTLSTEDWDSIPEIGDYSLRNKKKKFE 645
KDRREARLKEEIEKYRASNPKITEQFADLKRKL+TLS ++W+SIPEIGDYSLRNKKK+FE
Sbjct: 210 KDRREARLKEEIEKYRASNPKITEQFADLKRKLYTLSAQEWESIPEIGDYSLRNKKKRFE 269
Query: 646 SFVPVPDTMLEKARQEKEHVTALDPKSRGVGGAET 750
SFVPVPDT+LEKARQE+EHVTALDPKSR GG ET
Sbjct: 270 SFVPVPDTLLEKARQEQEHVTALDPKSRAAGGTET 304
>ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like [Vitis vinifera]
Length = 1023
Score = 285 bits (730), Expect = 5e-75
Identities = 148/217 (68%), Positives = 159/217 (73%), Gaps = 3/217 (1%)
Frame = +1
Query: 109 RLEFLNTKPPSNYVAGLGRGATGFTTRSDIGPARSAPDLPDRXXXXXXXXXXXXXXXXXX 288
RLEFLNTKPP NYVAGLGRGATGFTTRSDIGPAR+APDLPDR
Sbjct: 88 RLEFLNTKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSATTIGGAAAPGGIGRGR 147
Query: 289 XXXXXXXXXXXXXXXXX---NQKFDEFEGNDVGLFXXXXXXXXXXXXXXIWEAIDQRMDS 459
NQKFDEFEGNDVGLF +WEAID+RMDS
Sbjct: 148 GKGGAEEEEEDEGDEKGYDENQKFDEFEGNDVGLFASAEYDEDDKEADAVWEAIDKRMDS 207
Query: 460 RRKDRREARLKEEIEKYRASNPKITEQFADLKRKLHTLSTEDWDSIPEIGDYSLRNKKKK 639
RRKDRREARLK+EIEKYRASNPKITEQFADLKRKL TLS ++WDSIPEIGDYSLRNKK++
Sbjct: 208 RRKDRREARLKQEIEKYRASNPKITEQFADLKRKLCTLSAQEWDSIPEIGDYSLRNKKRR 267
Query: 640 FESFVPVPDTMLEKARQEKEHVTALDPKSRGVGGAET 750
FESFVPVPDT+LEKARQE+EHVTALDP+SR GG ET
Sbjct: 268 FESFVPVPDTLLEKARQEQEHVTALDPRSRAAGGTET 304
>emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]
Length = 1023
Score = 285 bits (730), Expect = 5e-75
Identities = 148/217 (68%), Positives = 159/217 (73%), Gaps = 3/217 (1%)
Frame = +1
Query: 109 RLEFLNTKPPSNYVAGLGRGATGFTTRSDIGPARSAPDLPDRXXXXXXXXXXXXXXXXXX 288
RLEFLNTKPP NYVAGLGRGATGFTTRSDIGPAR+APDLPDR
Sbjct: 88 RLEFLNTKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLPDRSATTIGGAAAPGGIGRGR 147
Query: 289 XXXXXXXXXXXXXXXXX---NQKFDEFEGNDVGLFXXXXXXXXXXXXXXIWEAIDQRMDS 459
NQKFDEFEGNDVGLF +WEAID+RMDS
Sbjct: 148 GKGGAEEEEEDEGDEKGYDENQKFDEFEGNDVGLFASAEYDEDDKEADAVWEAIDKRMDS 207
Query: 460 RRKDRREARLKEEIEKYRASNPKITEQFADLKRKLHTLSTEDWDSIPEIGDYSLRNKKKK 639
RRKDRREARLK+EIEKYRASNPKITEQFADLKRKL TLS ++WDSIPEIGDYSLRNKK++
Sbjct: 208 RRKDRREARLKQEIEKYRASNPKITEQFADLKRKLCTLSAQEWDSIPEIGDYSLRNKKRR 267
Query: 640 FESFVPVPDTMLEKARQEKEHVTALDPKSRGVGGAET 750
FESFVPVPDT+LEKARQE+EHVTALDP+SR GG ET
Sbjct: 268 FESFVPVPDTLLEKARQEQEHVTALDPRSRAAGGTET 304
>gb|AFW56581.1| hypothetical protein ZEAMMB73_917811 [Zea mays]
Length = 956
Score = 285 bits (728), Expect = 9e-75
Identities = 144/214 (67%), Positives = 157/214 (73%)
Frame = +1
Query: 109 RLEFLNTKPPSNYVAGLGRGATGFTTRSDIGPARSAPDLPDRXXXXXXXXXXXXXXXXXX 288
R +FLN+KPP+NYVAGLGRGATGFTTRSDIGPAR+APDLPDR
Sbjct: 25 RYDFLNSKPPANYVAGLGRGATGFTTRSDIGPARAAPDLPDRSAAAAGPAVGRGRGKPPG 84
Query: 289 XXXXXXXXXXXXXXXXXNQKFDEFEGNDVGLFXXXXXXXXXXXXXXIWEAIDQRMDSRRK 468
NQKFDEFEGND GLF +WE+IDQRMDSRRK
Sbjct: 85 EDDGDDDGGDEEKGYDENQKFDEFEGNDAGLFSNADYDDDDREADAVWESIDQRMDSRRK 144
Query: 469 DRREARLKEEIEKYRASNPKITEQFADLKRKLHTLSTEDWDSIPEIGDYSLRNKKKKFES 648
DRREARLK+EIEKYRASNPKITEQFADLKRKL LS ++W+SIPEIGDYSLRNKKK+FES
Sbjct: 145 DRREARLKQEIEKYRASNPKITEQFADLKRKLADLSAQEWESIPEIGDYSLRNKKKRFES 204
Query: 649 FVPVPDTMLEKARQEKEHVTALDPKSRGVGGAET 750
FVPVPDT+LEKARQE+EHVTALDPKSR GG ET
Sbjct: 205 FVPVPDTLLEKARQEQEHVTALDPKSRAAGGTET 238