BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012035
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japon...    64   2e-08
gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indi...    64   2e-08
ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts...    62   4e-08
ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati...    62   6e-08
tpg|DAA40909.1| TPA: hypothetical protein ZEAMMB73_069756 [Zea m...    61   8e-08

>dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
           gi|222637078|gb|EEE67210.1| hypothetical protein
           OsJ_24327 [Oryza sativa Japonica Group]
          Length = 1277

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/54 (62%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
 Frame = -1

Query: 236 PIMDSGTNLYETASQPD----AGPDAYTFLEFNTQADEDDFNYPQFQELSQPIR 87
           P   +  +LYETASQPD    A  DAYTFLEFNTQ   DDF+YP F ELSQP R
Sbjct: 6   PSSSAAADLYETASQPDPPASAAGDAYTFLEFNTQG--DDFDYPDFPELSQPAR 57


>gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
          Length = 1277

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/54 (62%), Positives = 38/54 (70%), Gaps = 4/54 (7%)
 Frame = -1

Query: 236 PIMDSGTNLYETASQPD----AGPDAYTFLEFNTQADEDDFNYPQFQELSQPIR 87
           P   +  +LYETASQPD    A  DAYTFLEFNTQ   DDF+YP F+ELSQP R
Sbjct: 6   PSSSADDDLYETASQPDPPASAAGDAYTFLEFNTQG--DDFDYPDFRELSQPAR 57


>ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog
           [Brachypodium distachyon]
          Length = 1267

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/54 (62%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
 Frame = -1

Query: 236 PIMDSGTNLYETASQPD----AGPDAYTFLEFNTQADEDDFNYPQFQELSQPIR 87
           P   +  +LYETASQPD    A  DAYTFLEFNTQ   DDF YP F ELSQP R
Sbjct: 6   PSSAAAADLYETASQPDPSASAAGDAYTFLEFNTQG--DDFEYPDFPELSQPAR 57


>ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
           gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay
           protein, putative [Ricinus communis]
          Length = 1280

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/42 (73%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
 Frame = -1

Query: 230 MDSG-TNLYETASQPDAGPDAYTFLEFNTQADEDDFNYPQFQ 108
           MDS  +NLYETASQPD G DAYTFLEFNTQ  E DF+YP+F+
Sbjct: 1   MDSEQSNLYETASQPDTGTDAYTFLEFNTQG-ESDFDYPEFR 41


>tpg|DAA40909.1| TPA: hypothetical protein ZEAMMB73_069756 [Zea mays]
          Length = 889

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
 Frame = -1

Query: 224 SGTNLYETASQPD--AGPDAYTFLEFNTQADEDDFNYPQFQELSQP 93
           +  +LYETASQPD  A  DAYTFLEFNTQ   DDF+YP F ELSQP
Sbjct: 11  AAVDLYETASQPDAPAAGDAYTFLEFNTQG--DDFDYPDFPELSQP 54