BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012014
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34194.3| unnamed protein product [Vitis vinifera]              289   9e-76
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   289   9e-76
ref|XP_003520835.1| PREDICTED: multisubstrate pseudouridine synt...   266   6e-69
ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt...   263   9e-68
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   260   6e-67

>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  289 bits (740), Expect = 9e-76
 Identities = 159/286 (55%), Positives = 191/286 (66%), Gaps = 6/286 (2%)
 Frame = +2

Query: 2    YVHSYQSYLWNHTASLRVQTYGHARVVSGDLVYCKEQCTGKLSIPDSVEEEDLATKDAYD 181
            YVHSYQSYLWNH AS+RVQ YG  +VV GDLVYCK     K++   + E +D    DA+D
Sbjct: 406  YVHSYQSYLWNHAASMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFD 465

Query: 182  N-----VSEADLREVKNSSVKVVDEEDLTAGVYTIEDVVLPLPGSRVIYPSNSIGNLYHD 346
            +     +SE DL E +N  VK +D EDL  G YTI+DVVLPLPGSR IYP+N I  +YHD
Sbjct: 466  SSHFDEISETDLPEERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHD 525

Query: 347  MAKKDGINLMESVHGVKEFSITNLTGGYRRVFQKPKDFKWELLKYTAGNIPLAETDLDRI 526
             AKKD I+L ES H VKEFSITN+TGG+RRVFQKP DF+WELL YT GNIPLAETD D+I
Sbjct: 526  FAKKDAISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKI 585

Query: 527  GTSIPCTVTNKGDPLNGNKGETITVNGEFQSGNSENVIQPLAENNKVESGTET-VETKNS 703
              S P  +    D  NGN+ E  +     QS + E+ +    +NN+    TE  +     
Sbjct: 586  TKSKPSNIIGGEDSRNGNEKEN-SFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEP 644

Query: 704  MDDTNIAEEQIALKLSFILPTSSYATMAIRELLKSSTSVAFHKSLN 841
              ++   E Q ALKLSF LP S YATMAIRELLK+STSVAF K+LN
Sbjct: 645  QFESGAPEAQRALKLSFTLPASCYATMAIRELLKTSTSVAFQKTLN 690


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  289 bits (740), Expect = 9e-76
 Identities = 159/286 (55%), Positives = 191/286 (66%), Gaps = 6/286 (2%)
 Frame = +2

Query: 2    YVHSYQSYLWNHTASLRVQTYGHARVVSGDLVYCKEQCTGKLSIPDSVEEEDLATKDAYD 181
            YVHSYQSYLWNH AS+RVQ YG  +VV GDLVYCK     K++   + E +D    DA+D
Sbjct: 407  YVHSYQSYLWNHAASMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFD 466

Query: 182  N-----VSEADLREVKNSSVKVVDEEDLTAGVYTIEDVVLPLPGSRVIYPSNSIGNLYHD 346
            +     +SE DL E +N  VK +D EDL  G YTI+DVVLPLPGSR IYP+N I  +YHD
Sbjct: 467  SSHFDEISETDLPEERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHD 526

Query: 347  MAKKDGINLMESVHGVKEFSITNLTGGYRRVFQKPKDFKWELLKYTAGNIPLAETDLDRI 526
             AKKD I+L ES H VKEFSITN+TGG+RRVFQKP DF+WELL YT GNIPLAETD D+I
Sbjct: 527  FAKKDAISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKI 586

Query: 527  GTSIPCTVTNKGDPLNGNKGETITVNGEFQSGNSENVIQPLAENNKVESGTET-VETKNS 703
              S P  +    D  NGN+ E  +     QS + E+ +    +NN+    TE  +     
Sbjct: 587  TKSKPSNIIGGEDSRNGNEKEN-SFQCMKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEP 645

Query: 704  MDDTNIAEEQIALKLSFILPTSSYATMAIRELLKSSTSVAFHKSLN 841
              ++   E Q ALKLSF LP S YATMAIRELLK+STSVAF K+LN
Sbjct: 646  QFESGAPEAQRALKLSFTLPASCYATMAIRELLKTSTSVAFQKTLN 691


>ref|XP_003520835.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max]
          Length = 687

 Score =  266 bits (681), Expect = 6e-69
 Identities = 150/285 (52%), Positives = 191/285 (67%), Gaps = 5/285 (1%)
 Frame = +2

Query: 2    YVHSYQSYLWNHTASLRVQTYGHARVVSGDLVYCKEQCTGKLSIPDSVE-EEDLATKDAY 178
            YVHSYQSYLWNH AS RVQ YG   VV GDLVYCKE  TGK++     E  ED + +  Y
Sbjct: 408  YVHSYQSYLWNHAASKRVQKYGTENVVLGDLVYCKENSTGKVTESVGSEYAEDCSGR--Y 465

Query: 179  DNVSEADLR---EVKNSSVKVVDEEDLTAGVYTIEDVVLPLPGSRVIYPSNSIGNLYHDM 349
            D+ +E ++      +  SVKVVD EDL +G YTI+DV+LP+PGSR+ YP+N I N+Y D+
Sbjct: 466  DSNNEDEISGEIHEEIDSVKVVDVEDLNSGYYTIDDVILPMPGSRIKYPTNHIANVYEDL 525

Query: 350  AKKDGINLMESVHGVKEFSITNLTGGYRRVFQKPKDFKWELLKYTAGNIPLAETDLDRIG 529
            AKKDGI+L ESVH V++FSIT++TG YRRVFQKP +F+WELL Y+  N  L ETDLD++ 
Sbjct: 526  AKKDGISLTESVHNVEDFSITSITGCYRRVFQKPINFEWELLTYSDSNKQLVETDLDKVN 585

Query: 530  TSIPCTVTNKGDPLNGNKGETITVNGEFQSGNSENVIQPLAENNKVESGTE-TVETKNSM 706
             S P     +    NG   E      E +S N  +V++   EN    +G E  +    S+
Sbjct: 586  KSKPMGTVKQMGAANGKNEEAFDCIRELESSN--DVVK--VENYSEIAGEEIKLPHDESL 641

Query: 707  DDTNIAEEQIALKLSFILPTSSYATMAIRELLKSSTSVAFHKSLN 841
              ++  + QIALKLSF LP S YATMAIRELLK+STSVA+HK+LN
Sbjct: 642  SGSSSQDSQIALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLN 686


>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max]
          Length = 687

 Score =  263 bits (671), Expect = 9e-68
 Identities = 149/287 (51%), Positives = 186/287 (64%), Gaps = 7/287 (2%)
 Frame = +2

Query: 2    YVHSYQSYLWNHTASLRVQTYGHARVVSGDLVYCKEQCTGKLS-IPDSVEEEDLATKDAY 178
            YVHSYQSYLWNH AS RVQ YG   VV GDLVYCKE  TGK++    S   ED   +   
Sbjct: 408  YVHSYQSYLWNHAASKRVQKYGTENVVLGDLVYCKENSTGKVTEFVGSEYAEDCRGRYDS 467

Query: 179  DNVSEA--DLREVKNSSVKVVDEEDLTAGVYTIEDVVLPLPGSRVIYPSNSIGNLYHDMA 352
            +N  E   ++ E  NS VKV+D EDL +G YTI+DV+LP+PGSRV YP+N I N+Y D+A
Sbjct: 468  NNEDEVSGEIHEEINS-VKVIDAEDLNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLA 526

Query: 353  KKDGINLMESVHGVKEFSITNLTGGYRRVFQKPKDFKWELLKYTAGNIPLAETDLDRIGT 532
            KKDGI+L ESVH V++FSIT++TG YRRVFQKP +F+WELL Y+  +  L +TDLD+I  
Sbjct: 527  KKDGISLTESVHNVEDFSITSITGCYRRVFQKPINFEWELLSYSDSSEQLVDTDLDKINK 586

Query: 533  SIPCTVTNKGDPLNGNKGETITVNGEFQSGNS----ENVIQPLAENNKVESGTETVETKN 700
            S P     +    NG   E      E +S +     EN  + L E  K+           
Sbjct: 587  SKPMNTVKQMGAANGKNEEAFDCIRELESSDDIAKVENYSEILGEEVKLPH-------DE 639

Query: 701  SMDDTNIAEEQIALKLSFILPTSSYATMAIRELLKSSTSVAFHKSLN 841
            S+  ++  + QIALKLSF LP S YATMAIRELLK+STSVA+HK+LN
Sbjct: 640  SLIGSSSQDSQIALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLN 686


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
            gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
            [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
            hypothetical protein At3g04820 [Arabidopsis thaliana]
            gi|332640619|gb|AEE74140.1| pseudouridine synthase
            [Arabidopsis thaliana]
          Length = 715

 Score =  260 bits (664), Expect = 6e-67
 Identities = 143/284 (50%), Positives = 185/284 (65%), Gaps = 4/284 (1%)
 Frame = +2

Query: 2    YVHSYQSYLWNHTASLRVQTYGHARVVSGDLVYCK----EQCTGKLSIPDSVEEEDLATK 169
            YVHSYQSYLWN+ ASLRV+ YG ++VV GDLV  K    ++    L+   +   E+    
Sbjct: 445  YVHSYQSYLWNNAASLRVKNYGTSQVVLGDLVSTKVDAAKRMVDSLTSEHNESSEEALDC 504

Query: 170  DAYDNVSEADLREVKNSSVKVVDEEDLTAGVYTIEDVVLPLPGSRVIYPSNSIGNLYHDM 349
            D  D+ +  DL   ++  VKVV  EDL AG Y+  D+VLPLPGSRVIYPSN I  +YHD+
Sbjct: 505  DQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDL 564

Query: 350  AKKDGINLMESVHGVKEFSITNLTGGYRRVFQKPKDFKWELLKYTAGNIPLAETDLDRIG 529
            AKKDGI+L ES+HGVKEFSIT++TGGYRRVFQKP DF+WELL YT  N PLAETDLDRI 
Sbjct: 565  AKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRIP 624

Query: 530  TSIPCTVTNKGDPLNGNKGETITVNGEFQSGNSENVIQPLAENNKVESGTETVETKNSMD 709
             + P       + +            E +S  S+       E N ++  T++ E +    
Sbjct: 625  MNKPVEKVGSTEEI------------EDESMKSDTNPHDSGETN-LKDQTDSNEAEKDTG 671

Query: 710  DTNIAEEQIALKLSFILPTSSYATMAIRELLKSSTSVAFHKSLN 841
            + +  + Q+ALK++  LP+S YATMAIRELLK+STSVA+HK+LN
Sbjct: 672  NPDSEQTQMALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN 715