BLASTX nr result
ID: Lithospermum22_contig00012007
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00012007 (312 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312948.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 ref|XP_002306193.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi... 55 8e-06 emb|CBI37850.3| unnamed protein product [Vitis vinifera] 55 8e-06 >ref|XP_002312948.1| predicted protein [Populus trichocarpa] gi|222849356|gb|EEE86903.1| predicted protein [Populus trichocarpa] Length = 320 Score = 57.0 bits (136), Expect = 2e-06 Identities = 24/27 (88%), Positives = 25/27 (92%) Frame = +3 Query: 3 HGRWFAGKMITATYMAPQTYEAKFPGS 83 HGRWFAGKMITAT+M PQTYEAKFP S Sbjct: 293 HGRWFAGKMITATFMVPQTYEAKFPDS 319 >ref|XP_002306193.1| predicted protein [Populus trichocarpa] gi|222849157|gb|EEE86704.1| predicted protein [Populus trichocarpa] Length = 348 Score = 55.8 bits (133), Expect = 3e-06 Identities = 23/27 (85%), Positives = 25/27 (92%) Frame = +3 Query: 3 HGRWFAGKMITATYMAPQTYEAKFPGS 83 HGRWFAGK+ITAT+M PQTYEAKFP S Sbjct: 321 HGRWFAGKLITATFMVPQTYEAKFPDS 347 >ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera] Length = 609 Score = 54.7 bits (130), Expect = 8e-06 Identities = 23/27 (85%), Positives = 24/27 (88%) Frame = +3 Query: 3 HGRWFAGKMITATYMAPQTYEAKFPGS 83 HGRWFAGKMITAT+M PQ YEAKFP S Sbjct: 582 HGRWFAGKMITATFMLPQNYEAKFPDS 608 >emb|CBI37850.3| unnamed protein product [Vitis vinifera] Length = 427 Score = 54.7 bits (130), Expect = 8e-06 Identities = 23/27 (85%), Positives = 24/27 (88%) Frame = +3 Query: 3 HGRWFAGKMITATYMAPQTYEAKFPGS 83 HGRWFAGKMITAT+M PQ YEAKFP S Sbjct: 400 HGRWFAGKMITATFMLPQNYEAKFPDS 426