BLASTX nr result

ID: Lithospermum22_contig00012007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00012007
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312948.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002306193.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...    55   8e-06
emb|CBI37850.3| unnamed protein product [Vitis vinifera]               55   8e-06

>ref|XP_002312948.1| predicted protein [Populus trichocarpa] gi|222849356|gb|EEE86903.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = +3

Query: 3   HGRWFAGKMITATYMAPQTYEAKFPGS 83
           HGRWFAGKMITAT+M PQTYEAKFP S
Sbjct: 293 HGRWFAGKMITATFMVPQTYEAKFPDS 319


>ref|XP_002306193.1| predicted protein [Populus trichocarpa] gi|222849157|gb|EEE86704.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +3

Query: 3   HGRWFAGKMITATYMAPQTYEAKFPGS 83
           HGRWFAGK+ITAT+M PQTYEAKFP S
Sbjct: 321 HGRWFAGKLITATFMVPQTYEAKFPDS 347


>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = +3

Query: 3   HGRWFAGKMITATYMAPQTYEAKFPGS 83
           HGRWFAGKMITAT+M PQ YEAKFP S
Sbjct: 582 HGRWFAGKMITATFMLPQNYEAKFPDS 608


>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = +3

Query: 3   HGRWFAGKMITATYMAPQTYEAKFPGS 83
           HGRWFAGKMITAT+M PQ YEAKFP S
Sbjct: 400 HGRWFAGKMITATFMLPQNYEAKFPDS 426


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