BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011977
         (1570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...   345   1e-92
emb|CBI35920.3| unnamed protein product [Vitis vinifera]              342   2e-91
ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221...   318   2e-84
ref|XP_002339506.1| predicted protein [Populus trichocarpa] gi|2...   300   5e-79
ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub...   293   9e-77

>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Vitis
            vinifera]
          Length = 421

 Score =  345 bits (886), Expect = 1e-92
 Identities = 184/376 (48%), Positives = 256/376 (68%), Gaps = 8/376 (2%)
 Frame = -2

Query: 1473 VTLKIQTLETNSEKFPPIVVRVPSRYDLLKNCQETEEVGASVKVYKDIKRTNRFQVRAKL 1294
            V +K++ +  + EK PP+V   PS +D  K      +   +VKV+++  R NR Q+    
Sbjct: 27   VNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSP 86

Query: 1293 NGSDVEFIGSNYDGEASRPQLCNYAFALIDKATNTIKMIPIAANKIFRLEPKIGNSDELE 1114
            N S V F+G++Y GEA+  Q+C YA  ++DK T T+K++PIA+NKIFRLEP++G SD   
Sbjct: 87   NDSKVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASV 146

Query: 1113 DVPQNAL----SREEKAEAMKDLQLLYSTRKS---ERERNALRAYDDAETRQDLDKKIEG 955
            D P + L    + EEKA  M+DL  LY T+KS    ++  AL   DD  +++DLD+K++ 
Sbjct: 147  DEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLKE 206

Query: 954  INLPAEADEVAASSINERNLPPYDLEASDPSRAYPLEKIISKGEWRYLLDVFHVSQVGGE 775
            + +  EA E + S+ + RN+PPYD  A+ P  AY L+KII KGEW YLLD+  + Q G E
Sbjct: 207  VVINKEALE-STSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVE 265

Query: 774  VTPEVYPSFVCNRVHKLESIKDENEKRKLAGIFSFITHLIRFKDKHAMDSVRSVAHHKIP 595
            V    Y SFVCNR+ KL+ ++DE EK  LA IFS+I HL+++KD+++MD+  S  HHKIP
Sbjct: 266  VESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSAKHHKIP 324

Query: 594  GILFHKFSSMF-VDSESKRLATEKIELLISYVLVLTLFVDDFRTDLTDIAMDLRMPAFKL 418
            GIL  KFSSMF +DS+S+RL  EK +LLISYVLVLTL+ D+FRTD +DIA DLRM A KL
Sbjct: 325  GILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKL 384

Query: 417  RSYYESLGCKLVREKQ 370
            R+++E LGCKLV + +
Sbjct: 385  RAHFEHLGCKLVSQNK 400


>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  342 bits (876), Expect = 2e-91
 Identities = 182/372 (48%), Positives = 253/372 (68%), Gaps = 8/372 (2%)
 Frame = -2

Query: 1461 IQTLETNSEKFPPIVVRVPSRYDLLKNCQETEEVGASVKVYKDIKRTNRFQVRAKLNGSD 1282
            ++ +  + EK PP+V   PS +D  K      +   +VKV+++  R NR Q+    N S 
Sbjct: 1    MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSPNDSK 60

Query: 1281 VEFIGSNYDGEASRPQLCNYAFALIDKATNTIKMIPIAANKIFRLEPKIGNSDELEDVPQ 1102
            V F+G++Y GEA+  Q+C YA  ++DK T T+K++PIA+NKIFRLEP++G SD   D P 
Sbjct: 61   VNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASVDEPS 120

Query: 1101 NAL----SREEKAEAMKDLQLLYSTRKS---ERERNALRAYDDAETRQDLDKKIEGINLP 943
            + L    + EEKA  M+DL  LY T+KS    ++  AL   DD  +++DLD+K++ + + 
Sbjct: 121  SLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLKEVVIN 180

Query: 942  AEADEVAASSINERNLPPYDLEASDPSRAYPLEKIISKGEWRYLLDVFHVSQVGGEVTPE 763
             EA E + S+ + RN+PPYD  A+ P  AY L+KII KGEW YLLD+  + Q G EV   
Sbjct: 181  KEALE-STSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEVESS 239

Query: 762  VYPSFVCNRVHKLESIKDENEKRKLAGIFSFITHLIRFKDKHAMDSVRSVAHHKIPGILF 583
             Y SFVCNR+ KL+ ++DE EK  LA IFS+I HL+++KD+++MD+  S  HHKIPGIL 
Sbjct: 240  AYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSAKHHKIPGILN 298

Query: 582  HKFSSMF-VDSESKRLATEKIELLISYVLVLTLFVDDFRTDLTDIAMDLRMPAFKLRSYY 406
             KFSSMF +DS+S+RL  EK +LLISYVLVLTL+ D+FRTD +DIA DLRM A KLR+++
Sbjct: 299  QKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLRAHF 358

Query: 405  ESLGCKLVREKQ 370
            E LGCKLV + +
Sbjct: 359  EHLGCKLVSQNK 370


>ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221697 [Cucumis sativus]
            gi|449480549|ref|XP_004155927.1| PREDICTED:
            uncharacterized protein LOC101224839 [Cucumis sativus]
          Length = 435

 Score =  318 bits (816), Expect = 2e-84
 Identities = 169/371 (45%), Positives = 245/371 (66%), Gaps = 8/371 (2%)
 Frame = -2

Query: 1464 KIQTLETNSEKFPPIVVRVPSRYDLLKNCQETEEVGASVKVYKDIKRTNRFQVRAKLNGS 1285
            KIQ L    +K PP+V   PS +D  K+  + +      +VYK   R NR Q+     GS
Sbjct: 44   KIQVLSNQPQKTPPVVGYFPSGFDPHKDADKEQSRSVRARVYKHKNRPNRMQLVVSPTGS 103

Query: 1284 DVEFIGSNYDGEASR-PQLCNYAFALIDKATNTIKMIPIAANKIFRLEPKIGNSDELED- 1111
            +V+F+G+NY GEA+   Q C YA  ++DKAT ++K++PIA+N IFRL+PK+  SD  E+ 
Sbjct: 104  NVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMIFRLDPKVRGSDVTENE 163

Query: 1110 ---VPQNALSREEKAEAMKDLQLLYSTRKSERER---NALRAYDDAETRQDLDKKIEGIN 949
               V    LS ++KA  M++L  LY T+KS+++    +AL+  DD ET+ DLD +++ + 
Sbjct: 164  SPSVANEELSGQDKANRMRELTALYGTKKSKKQAQKLHALKQEDDPETKSDLDGRMKNVV 223

Query: 948  LPAEADEVAASSINERNLPPYDLEASDPSRAYPLEKIISKGEWRYLLDVFHVSQVGGEVT 769
            +  EA E   + +  RN+P Y+  A+ P  AYPL+KII KGEW +L D++   Q   E++
Sbjct: 224  VNKEALEGTQAEV-ARNIPAYNASATTPQEAYPLDKIILKGEWSFLEDLYFRLQETAEIS 282

Query: 768  PEVYPSFVCNRVHKLESIKDENEKRKLAGIFSFITHLIRFKDKHAMDSVRSVAHHKIPGI 589
               YPSFV NR++KL+ I+DE EK+KL  IFS+ITHLI++KD+H+M  V S   HKIP +
Sbjct: 283  A-TYPSFVRNRIYKLQDIQDEEEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKGHKIPSM 341

Query: 588  LFHKFSSMFVDSESKRLATEKIELLISYVLVLTLFVDDFRTDLTDIAMDLRMPAFKLRSY 409
            L  KFSSMF  +ES+RL+ +KI LLIS+VLVL+LF D+F +D  DIA DLR   + LR +
Sbjct: 342  LRQKFSSMFPTAESRRLSADKINLLISHVLVLSLFADEFSSDPADIAKDLRTSPYDLRLH 401

Query: 408  YESLGCKLVRE 376
            +++LGCK +R+
Sbjct: 402  FDNLGCKFIRK 412


>ref|XP_002339506.1| predicted protein [Populus trichocarpa] gi|222839699|gb|EEE78022.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  300 bits (769), Expect = 5e-79
 Identities = 165/403 (40%), Positives = 249/403 (61%), Gaps = 31/403 (7%)
 Frame = -2

Query: 1488 SDDNEVTLKIQTLETNSEKFPPIVVRVPSRYDLLK--NCQETEE------VGASVKVYKD 1333
            ++   + +K++ +    +K PP+V   PS Y+  K  +  + +E         SVK+Y++
Sbjct: 49   NEQPRLDVKLELVNNQVDKTPPVVGYFPSGYNPHKTNDINDAQEPILPLAAPPSVKLYRN 108

Query: 1332 IKR----------------TNRFQVRAKLNGSDVEFIGSNYDGEASRPQLCNYAFALIDK 1201
             +R                + R ++    NGS+VEF+G++Y GEA   QLC YA  ++DK
Sbjct: 109  AQRAKVEKSSGEKNEKGRTSERLELVVSPNGSNVEFVGNSYKGEAMAAQLCTYALGVLDK 168

Query: 1200 ATNTIKMIPIAANKIFRLEPKIGNS----DELEDVPQNALSREEKAEAMKDLQLLYSTRK 1033
            AT T+K++PIA NKI RLEPK+  S     E  +     ++ E++A  ++ L + Y  +K
Sbjct: 169  ATQTLKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKK 228

Query: 1032 S---ERERNALRAYDDAETRQDLDKKIEGINLPAEADEVAASSINERNLPPYDLEASDPS 862
            S   +++  ALR  DD  +++DL +KIE   +  +A E + S  + RN+PPY+  A  P 
Sbjct: 229  SIIQDKKMQALRKGDDPLSQKDLGRKIENAPINKDALE-STSGHSARNIPPYNSSAITPQ 287

Query: 861  RAYPLEKIISKGEWRYLLDVFHVSQVGGEVTPEVYPSFVCNRVHKLESIKDENEKRKLAG 682
             AYPL+ II  GEW +L D++ + QVGGEV    YP+FVCNR+ KL  I+DE EK++L+ 
Sbjct: 288  EAYPLDGIILTGEWDFLEDIYKILQVGGEVASNAYPTFVCNRIQKLREIQDEVEKKRLSC 347

Query: 681  IFSFITHLIRFKDKHAMDSVRSVAHHKIPGILFHKFSSMFVDSESKRLATEKIELLISYV 502
            IFS+ITHL++FKD+H+MD   S  +H+ P I+  KF  MF   E++RL+ +KI+LLISYV
Sbjct: 348  IFSYITHLLKFKDQHSMDGAASARNHQFPSIIRQKFFEMF-KPETRRLSVDKIDLLISYV 406

Query: 501  LVLTLFVDDFRTDLTDIAMDLRMPAFKLRSYYESLGCKLVREK 373
            LVLTL+ DDFRT   D++ DLRM    ++S+Y +LGCK+ REK
Sbjct: 407  LVLTLYADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREK 449


>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Glycine
            max]
          Length = 424

 Score =  293 bits (750), Expect = 9e-77
 Identities = 160/380 (42%), Positives = 237/380 (62%), Gaps = 4/380 (1%)
 Frame = -2

Query: 1500 QLMASDDNEVTLKIQTLETNSEKFPPIVVRVPSRYDLLKNCQETEEVGASVKVYKDIKRT 1321
            +++     ++ ++++ +  +  K PP+V   PS +D +KN        ++ +VY+     
Sbjct: 27   EVVQPQSEQIEVEVEVVREHPNKTPPVVGYFPSGFDPVKNHGGGP---SNFQVYRHRSMP 83

Query: 1320 NRFQVRAKLNGSDVEFIGSNYDGEASRPQLCNYAFALIDKATNTIKMIPIAANKIFRLEP 1141
             R ++  +   S VEF+G++Y GEA+      YA  ++DK   T+K++PIA NKIFRLEP
Sbjct: 84   KRLELVVRPPRSSVEFVGTSYAGEAAARHRAKYALGVLDKEAGTLKVVPIAGNKIFRLEP 143

Query: 1140 KIGNSDELEDVPQNALSRE-EKAEAMKDLQLLYSTRKS---ERERNALRAYDDAETRQDL 973
            K+      E+ P N+   E  + +   +   ++ T+K     +++ ALR  +D +++++L
Sbjct: 144  KVKGVGAFENEPANSTLEEMTQQQKFAETTSIWGTKKDIEKAKKKLALRQDEDPDSQRNL 203

Query: 972  DKKIEGINLPAEADEVAASSINERNLPPYDLEASDPSRAYPLEKIISKGEWRYLLDVFHV 793
            D K++ + +  +A E   S ++ RN+PPYD  A+ P  AY L+KII KGEW YL D+++ 
Sbjct: 204  DVKMKSVTVNKKALESTESHVS-RNIPPYDASATTPQEAYILDKIILKGEWDYLEDIYNN 262

Query: 792  SQVGGEVTPEVYPSFVCNRVHKLESIKDENEKRKLAGIFSFITHLIRFKDKHAMDSVRSV 613
             Q G E     YP+FV NR+ +L  IKDE+EK++L+ IFS+I HLI+FKD+H+ D V S 
Sbjct: 263  LQRGEEADFSAYPTFVRNRIERLRKIKDESEKKQLSCIFSYINHLIKFKDQHSFD-VLSA 321

Query: 612  AHHKIPGILFHKFSSMFVDSESKRLATEKIELLISYVLVLTLFVDDFRTDLTDIAMDLRM 433
              HKIP IL HKFS+MF  SESKRL  EKI LLI YVLVLTLF D+FRTD TDIA DL M
Sbjct: 322  KGHKIPNILRHKFSNMFAVSESKRLPPEKISLLICYVLVLTLFSDEFRTDYTDIAKDLSM 381

Query: 432  PAFKLRSYYESLGCKLVREK 373
                +R  YE LGCK+ R+K
Sbjct: 382  NILPVRQLYEHLGCKISRQK 401