BLASTX nr result

ID: Lithospermum22_contig00011946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011946
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vit...    75   2e-11
emb|CAN75635.1| hypothetical protein VITISV_044171 [Vitis vinifera]    75   2e-11
ref|XP_004146004.1| PREDICTED: 60S ribosomal protein L18a-1-like...    64   4e-08
ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative ...    64   4e-08
ref|XP_003543169.1| PREDICTED: 60S ribosomal protein L18a-1-like...    62   1e-07

>ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vitis vinifera]
           gi|296082825|emb|CBI22126.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 44/118 (37%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
 Frame = +3

Query: 159 EEQQQVAAQHYGTFEGIP---QQPTIGF------XXXXXXXXXXXXXXXXXXXXXXXVTG 311
           EE +  + QHYGTF+G+P   Q P +GF                             V G
Sbjct: 3   EESKNRSDQHYGTFQGVPTYSQPPAVGFPQPVPPPGAAEPSAPPPPPPQYYAHGYQAVPG 62

Query: 312 YVVAEGTPVRRQRPLPXXXXXXXXXXXXXXXXXXAIPWYLGAFVMLFSRIDYREKPGY 485
           Y VAEGTPVR +R LP                  A+PWY+G F++L +R+DYREKPGY
Sbjct: 63  YAVAEGTPVRERR-LPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCARVDYREKPGY 119


>emb|CAN75635.1| hypothetical protein VITISV_044171 [Vitis vinifera]
          Length = 141

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 44/118 (37%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
 Frame = +3

Query: 159 EEQQQVAAQHYGTFEGIP---QQPTIGF------XXXXXXXXXXXXXXXXXXXXXXXVTG 311
           EE +  + QHYGTF+G+P   Q P +GF                             V G
Sbjct: 3   EESKNRSDQHYGTFQGVPTYSQPPAVGFPQPVPPPGAAEPSAPPPPPPQYYAHGYQAVPG 62

Query: 312 YVVAEGTPVRRQRPLPXXXXXXXXXXXXXXXXXXAIPWYLGAFVMLFSRIDYREKPGY 485
           Y VAEGTPVR +R LP                  A+PWY+G F++L +R+DYREKPGY
Sbjct: 63  YAVAEGTPVRERR-LPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCARVDYREKPGY 119


>ref|XP_004146004.1| PREDICTED: 60S ribosomal protein L18a-1-like [Cucumis sativus]
           gi|449524020|ref|XP_004169021.1| PREDICTED: 60S
           ribosomal protein L18a-1-like [Cucumis sativus]
          Length = 153

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 36/104 (34%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
 Frame = +3

Query: 186 HYGTFEGIPQQPTIGFXXXXXXXXXXXXXXXXXXXXXXX----VTGYVVAEGTPVRRQRP 353
           HYGTF+G+   P +GF                           V GY + EG PVR  R 
Sbjct: 26  HYGTFQGVANYPPVGFSHPTRLPGVPDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPR- 84

Query: 354 LPXXXXXXXXXXXXXXXXXXAIPWYLGAFVMLFSRIDYREKPGY 485
           LP                  AIPWY GA +++  R+DYREKPGY
Sbjct: 85  LPCCGIGIGWFLFIIGFFLAAIPWYAGAILIICGRVDYREKPGY 128


>ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis]
           gi|223530361|gb|EEF32252.1| 60S ribosomal protein L18a,
           plant, putative [Ricinus communis]
          Length = 166

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 41/107 (38%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
 Frame = +3

Query: 189 YGTFEGI--------PQQPTIGFXXXXXXXXXXXXXXXXXXXXXXXVTGYVVAEGTPVRR 344
           YGTF+G+        PQ P IGF                       V GY VAEG PVR 
Sbjct: 38  YGTFQGVANYPPPHPPQHPVIGFPQPVPPPGASEPPAYPHGYQT--VPGYAVAEGRPVRE 95

Query: 345 QRPLPXXXXXXXXXXXXXXXXXXAIPWYLGAFVMLFSRIDYREKPGY 485
           +R LP                  AIPWY+G F++L +RID REKPGY
Sbjct: 96  RR-LPCCGIGVGWFLFIIGFFLGAIPWYVGLFILLCARIDPREKPGY 141


>ref|XP_003543169.1| PREDICTED: 60S ribosomal protein L18a-1-like [Glycine max]
          Length = 160

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 43/116 (37%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
 Frame = +3

Query: 162 EQQQVAAQHYGTFEGI-----PQ-QPTIGFXXXXXXXXXXXXXXXXXXXXXXX--VTGYV 317
           + Q   A  YGTF+G+     PQ  P IGF                         V GY 
Sbjct: 21  QPQPFPAAQYGTFQGVANYPPPQPHPAIGFPHPVPPPGAVDSSAPPPPYYPGYQAVPGYA 80

Query: 318 VAEGTPVRRQRPLPXXXXXXXXXXXXXXXXXXAIPWYLGAFVMLFSRIDYREKPGY 485
           VAEG PVR +R L                    IPWY+GA +ML SR+DYREKPGY
Sbjct: 81  VAEGRPVRERR-LGCCGLGCGWCLFILGFFLAGIPWYVGAIIMLCSRVDYREKPGY 135


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