BLASTX nr result

ID: Lithospermum22_contig00011940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011940
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB55378.1| histone deacetylase-like protein-like [Solanum tu...   139   8e-31
gb|ABB29936.1| deacetylase-like protein [Solanum tuberosum]           139   8e-31
gb|ABA40460.1| histone deacetylase-like protein [Solanum tuberosum]   139   8e-31
ref|XP_002328078.1| histone deacetylase [Populus trichocarpa] gi...   130   6e-28
gb|ABK93186.1| unknown [Populus trichocarpa]                          130   6e-28

>gb|ABB55378.1| histone deacetylase-like protein-like [Solanum tuberosum]
          Length = 191

 Score =  139 bits (351), Expect = 8e-31
 Identities = 65/95 (68%), Positives = 80/95 (84%)
 Frame = +1

Query: 106 MEFWGVEVKPGESLKVKPQLYKMIHISQASLGELKNAKGNVNVPLRLKIDGKSFVMGFLS 285
           MEFWGVEVK G++LKVKP+L+K+IH+SQA++GE+K+ K    VPLRL +   S+V+G LS
Sbjct: 1   MEFWGVEVKAGQTLKVKPELFKLIHVSQAAIGEVKDVKEAKYVPLRLTVGENSYVIGTLS 60

Query: 286 TEDRPQMMVDLVFGKEFELSHDWKNGSVYFIGYTA 390
            EDRPQ+M DLVF KEFELSH WKNGSV+FIGYTA
Sbjct: 61  AEDRPQLMFDLVFEKEFELSHGWKNGSVHFIGYTA 95


>gb|ABB29936.1| deacetylase-like protein [Solanum tuberosum]
          Length = 299

 Score =  139 bits (351), Expect = 8e-31
 Identities = 65/95 (68%), Positives = 80/95 (84%)
 Frame = +1

Query: 106 MEFWGVEVKPGESLKVKPQLYKMIHISQASLGELKNAKGNVNVPLRLKIDGKSFVMGFLS 285
           MEFWGVEVK G++LKVKP+L+K+IH+SQA++GE+K+ K    VPLRL +   S+V+G LS
Sbjct: 1   MEFWGVEVKAGQTLKVKPELFKLIHVSQAAIGEVKDVKEAKYVPLRLTVGENSYVIGTLS 60

Query: 286 TEDRPQMMVDLVFGKEFELSHDWKNGSVYFIGYTA 390
            EDRPQ+M DLVF KEFELSH WKNGSV+FIGYTA
Sbjct: 61  AEDRPQLMFDLVFEKEFELSHGWKNGSVHFIGYTA 95


>gb|ABA40460.1| histone deacetylase-like protein [Solanum tuberosum]
          Length = 223

 Score =  139 bits (351), Expect = 8e-31
 Identities = 65/95 (68%), Positives = 80/95 (84%)
 Frame = +1

Query: 106 MEFWGVEVKPGESLKVKPQLYKMIHISQASLGELKNAKGNVNVPLRLKIDGKSFVMGFLS 285
           MEFWGVEVK G++LKVKP+L+K+IH+SQA++GE+K+ K    VPLRL +   S+V+G LS
Sbjct: 1   MEFWGVEVKAGQTLKVKPELFKLIHVSQAAIGEVKDVKEAKYVPLRLTVGENSYVIGTLS 60

Query: 286 TEDRPQMMVDLVFGKEFELSHDWKNGSVYFIGYTA 390
            EDRPQ+M DLVF KEFELSH WKNGSV+FIGYTA
Sbjct: 61  AEDRPQLMFDLVFEKEFELSHGWKNGSVHFIGYTA 95


>ref|XP_002328078.1| histone deacetylase [Populus trichocarpa]
           gi|222837593|gb|EEE75958.1| histone deacetylase [Populus
           trichocarpa]
          Length = 260

 Score =  130 bits (326), Expect = 6e-28
 Identities = 94/246 (38%), Positives = 123/246 (50%), Gaps = 19/246 (7%)
 Frame = +1

Query: 100 TKMEFWGVEVKPGESLKVKPQLYKMIHISQASLGELKNAKGNVNVPLRLKIDGKSFVMGF 279
           + MEFWGVEVK GE LKV+P+ + MIH+SQA+LGE  + KGN +VPL LK+D K  V+G 
Sbjct: 2   SSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGE-SSKKGNESVPLFLKLDEKKLVLGT 60

Query: 280 LSTEDRPQMMVDLVFGKEFELSHDWKNGSVYFIGYTA---XXXXXXXXXXXXIPTD--ED 444
           LS +  PQ+  DLVF +EFELSH+WKNGSV+F GY A               IP +  E+
Sbjct: 61  LSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPENDSDFSDDGDEIPFEKVEN 120

Query: 445 VELPNGI--PVKGER-QINGGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPKDIAQET 615
           V+   G     K E+ + N                                L +D+  E+
Sbjct: 121 VKFATGTDKAAKPEKPKANPVVPSKDDESDDDDSDDDSDEDDSGDGSEGMSLEEDLDDES 180

Query: 616 SSSDDEPEPPKQNQLNKKRVE------PVTKKPKLSAPPQ-----KAGGNGPSPKNAAKA 762
            S D+  E PK+ + +KKR        PV+ K   +A PQ     KAG   P P     A
Sbjct: 181 DSEDE--ETPKKAEQSKKRTSDSAIKTPVSSKKAKTATPQKTDGGKAGQVTPHPAKGKAA 238

Query: 763 KNGKRP 780
            NG  P
Sbjct: 239 SNGNNP 244


>gb|ABK93186.1| unknown [Populus trichocarpa]
          Length = 279

 Score =  130 bits (326), Expect = 6e-28
 Identities = 94/246 (38%), Positives = 123/246 (50%), Gaps = 19/246 (7%)
 Frame = +1

Query: 100 TKMEFWGVEVKPGESLKVKPQLYKMIHISQASLGELKNAKGNVNVPLRLKIDGKSFVMGF 279
           + MEFWGVEVK GE LKV+P+ + MIH+SQA+LGE  + KGN +VPL LK+D K  V+G 
Sbjct: 2   SSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGE-SSKKGNESVPLFLKLDEKKLVLGT 60

Query: 280 LSTEDRPQMMVDLVFGKEFELSHDWKNGSVYFIGYTA---XXXXXXXXXXXXIPTD--ED 444
           LS +  PQ+  DLVF +EFELSH+WKNGSV+F GY A               IP +  E+
Sbjct: 61  LSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPENDSDFSDDGDEIPFEKVEN 120

Query: 445 VELPNGI--PVKGER-QINGGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPKDIAQET 615
           V+   G     K E+ + N                                L +D+  E+
Sbjct: 121 VKFATGTDKAAKPEKPKANPVVPSKDDESDDDDSDDDSDEDDSGDGSEGMSLEEDLDDES 180

Query: 616 SSSDDEPEPPKQNQLNKKRVE------PVTKKPKLSAPPQ-----KAGGNGPSPKNAAKA 762
            S D+  E PK+ + +KKR        PV+ K   +A PQ     KAG   P P     A
Sbjct: 181 DSEDE--ETPKKAEQSKKRTSDSAIKTPVSSKKAKTATPQKTDGGKAGQVTPHPAKGEAA 238

Query: 763 KNGKRP 780
            NG  P
Sbjct: 239 SNGNNP 244


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