BLASTX nr result
ID: Lithospermum22_contig00011915
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00011915
(2194 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi... 581 e-163
ref|XP_002303045.1| predicted protein [Populus trichocarpa] gi|2... 571 e-160
ref|NP_199684.2| pentatricopeptide repeat-containing protein [Ar... 556 e-155
ref|XP_002529915.1| pentatricopeptide repeat-containing protein,... 550 e-154
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi... 548 e-153
>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product
[Vitis vinifera]
Length = 497
Score = 581 bits (1498), Expect = e-163
Identities = 281/359 (78%), Positives = 316/359 (88%)
Frame = -3
Query: 1151 QVFELLREQLWYRPNTGIYIKLIVMLGKCKQPVKAQLLFQEMIDDGCDVNSETYTALLSA 972
+VFELLREQLWYRPN+GIYIKLIVMLGKCKQP KA LF MID+GC VN E YTALLSA
Sbjct: 123 KVFELLREQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSA 182
Query: 971 YSRSGYFNEAFSILELMKKTPYCQPDVFTYSILLKSCLHVQDFEKAKSVLSDMASQGIKP 792
YSRSG F++AFS+LE MK TP CQPDV TYS+L+KSCL V F+K +LSDMA+QGIKP
Sbjct: 183 YSRSGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKP 242
Query: 791 NTITYNTLIDAYGKAKRFTEMESILVEMLRQRDCEPDVWTMNSTLRAFGGSGQIEMMENC 612
NT+TYNTLIDAYGKAKRF EMES L+EMLR+ CEPDVWTMNSTLRAFG SGQIE ME C
Sbjct: 243 NTVTYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKC 302
Query: 611 YDKFQSSGINPNIKTFNILLDSYGKTGNYEKMSSVMEYMQKYHFSWTLVTYNIVIDAFGR 432
Y+KFQS+GI PNIKTFNILLDSYGK YEKMS+VMEYMQKYHFSWT+VTYN+VIDAFGR
Sbjct: 303 YEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGR 362
Query: 431 AGDLKQMEFLFRLMQSERIKPNCVTLCSLIKAYGQAGKLEKIESILHYIENSDMTLDIVF 252
AGDLKQME+LFRLM+SERIKP+CVTLCSL++AYG+AGK EKI +L +IENSD+ LDIVF
Sbjct: 363 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVF 422
Query: 251 FNSLVDAFGMMGCLAEMKGVLEMMEKKGCKPDKITYRTMIKAYSINGMSNQAKELLNVL 75
FN LVDA+G +GC AEMKGVLEMM+KKGCKPDKITYRTMIKAY I GM++ AKEL ++
Sbjct: 423 FNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTSCAKELQGLM 481
>ref|XP_002303045.1| predicted protein [Populus trichocarpa] gi|222844771|gb|EEE82318.1|
predicted protein [Populus trichocarpa]
Length = 388
Score = 571 bits (1472), Expect = e-160
Identities = 272/362 (75%), Positives = 320/362 (88%)
Frame = -3
Query: 1148 VFELLREQLWYRPNTGIYIKLIVMLGKCKQPVKAQLLFQEMIDDGCDVNSETYTALLSAY 969
VFELLREQLWYRP G+Y+KLIVMLGKCKQP KA LFQ MID+GC V E+YTALLSAY
Sbjct: 16 VFELLREQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAY 75
Query: 968 SRSGYFNEAFSILELMKKTPYCQPDVFTYSILLKSCLHVQDFEKAKSVLSDMASQGIKPN 789
RSG F++AFSI+E MK TP C+PDV TYSIL+KSCL V F+K + +LSDM S GI+PN
Sbjct: 76 GRSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPN 135
Query: 788 TITYNTLIDAYGKAKRFTEMESILVEMLRQRDCEPDVWTMNSTLRAFGGSGQIEMMENCY 609
T+TYNT+IDAYGKAK F EME+ L+EML Q+DCEPDVWTMNST+RAFGGSGQ+EMMENCY
Sbjct: 136 TVTYNTVIDAYGKAKMFAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCY 195
Query: 608 DKFQSSGINPNIKTFNILLDSYGKTGNYEKMSSVMEYMQKYHFSWTLVTYNIVIDAFGRA 429
+KFQS+GI PNIKTFNILLDSYGK GNY+KMS+VMEYMQ+YH+SWT+VTYN+VIDAFGRA
Sbjct: 196 EKFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRA 255
Query: 428 GDLKQMEFLFRLMQSERIKPNCVTLCSLIKAYGQAGKLEKIESILHYIENSDMTLDIVFF 249
GDLKQME+LFRLM+SERIKP+CVTLCSL++AY +AGK EKI S+L +IENSD+TLD VFF
Sbjct: 256 GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFF 315
Query: 248 NSLVDAFGMMGCLAEMKGVLEMMEKKGCKPDKITYRTMIKAYSINGMSNQAKELLNVLAS 69
N LVDA+G + C AEMK VLE+ME+KGCKPDK+TYRTMIKAYSI GM++ AK+L N+L S
Sbjct: 316 NCLVDAYGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIKAYSIKGMTSHAKKLRNLLGS 375
Query: 68 LK 63
++
Sbjct: 376 VE 377
Score = 94.7 bits (234), Expect = 9e-17
Identities = 73/295 (24%), Positives = 127/295 (43%), Gaps = 35/295 (11%)
Frame = -3
Query: 1154 FQVFELLREQLWYRPNTGIYIKLIVMLGKCKQPVKAQLLFQEMIDDGCDVNSETYTALLS 975
F + E ++ RP+ Y LI + K Q+L +M G N+ TY ++
Sbjct: 85 FSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTYNTVID 144
Query: 974 AYSRSGYFNEAFSILELMKKTPYCQPDVFTYSILLKSCLHVQDFEKAKSVLSDMASQGIK 795
AY ++ F E + L M C+PDV+T + +++ E ++ S GI+
Sbjct: 145 AYGKAKMFAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIE 204
Query: 794 PNTITYNTLIDAYGKAKRFTEMESILVEMLRQRDCEPDVWTMNSTLRAFGGSGQIEMMEN 615
PN T+N L+D+YGKA + +M +++ E +++ + T N + AFG +G ++ ME
Sbjct: 205 PNIKTFNILLDSYGKAGNYQKMSAVM-EYMQRYHYSWTIVTYNVVIDAFGRAGDLKQMEY 263
Query: 614 CYDKFQSSGINPNIKT-----------------------------------FNILLDSYG 540
+ +S I P+ T FN L+D+YG
Sbjct: 264 LFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFNCLVDAYG 323
Query: 539 KTGNYEKMSSVMEYMQKYHFSWTLVTYNIVIDAFGRAGDLKQMEFLFRLMQSERI 375
+ + +M V+E M++ VTY +I A+ G + L L+ S +
Sbjct: 324 RLECFAEMKEVLELMEEKGCKPDKVTYRTMIKAYSIKGMTSHAKKLRNLLGSVEV 378
>ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g48730, chloroplastic; Flags: Precursor
gi|332008334|gb|AED95717.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 556 bits (1432), Expect = e-155
Identities = 269/362 (74%), Positives = 313/362 (86%)
Frame = -3
Query: 1151 QVFELLREQLWYRPNTGIYIKLIVMLGKCKQPVKAQLLFQEMIDDGCDVNSETYTALLSA 972
QVFELLREQLWY+PN GIY+KLIVMLGKCKQP KA LFQEMI++GC VN E YTAL+SA
Sbjct: 135 QVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSA 194
Query: 971 YSRSGYFNEAFSILELMKKTPYCQPDVFTYSILLKSCLHVQDFEKAKSVLSDMASQGIKP 792
YSRSG F+ AF++LE MK + CQPDV TYSIL+KS L V F+K + +LSDM QGI+P
Sbjct: 195 YSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRP 254
Query: 791 NTITYNTLIDAYGKAKRFTEMESILVEMLRQRDCEPDVWTMNSTLRAFGGSGQIEMMENC 612
NTITYNTLIDAYGKAK F EMES L++ML + DC+PD WTMNSTLRAFGG+GQIEMMENC
Sbjct: 255 NTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENC 314
Query: 611 YDKFQSSGINPNIKTFNILLDSYGKTGNYEKMSSVMEYMQKYHFSWTLVTYNIVIDAFGR 432
Y+KFQSSGI PNI+TFNILLDSYGK+GNY+KMS+VMEYMQKYH+SWT+VTYN+VIDAFGR
Sbjct: 315 YEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR 374
Query: 431 AGDLKQMEFLFRLMQSERIKPNCVTLCSLIKAYGQAGKLEKIESILHYIENSDMTLDIVF 252
AGDLKQME+LFRLMQSERI P+CVTLCSL++AYG+A K +KI +L +IENSD+ LD+VF
Sbjct: 375 AGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVF 434
Query: 251 FNSLVDAFGMMGCLAEMKGVLEMMEKKGCKPDKITYRTMIKAYSINGMSNQAKELLNVLA 72
FN LVDA+G M AEMKGVLE+MEKKG KPDKITYRTM+KAY I+GM+ KEL V+
Sbjct: 435 FNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVE 494
Query: 71 SL 66
S+
Sbjct: 495 SV 496
>ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530592|gb|EEF32469.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 636
Score = 550 bits (1416), Expect = e-154
Identities = 266/361 (73%), Positives = 313/361 (86%)
Frame = -3
Query: 1151 QVFELLREQLWYRPNTGIYIKLIVMLGKCKQPVKAQLLFQEMIDDGCDVNSETYTALLSA 972
+VFELLREQ+WYRP +G+YIKLIVMLGKCKQP KA LFQ MI +GCDV+ E+YTALLSA
Sbjct: 140 KVFELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSA 199
Query: 971 YSRSGYFNEAFSILELMKKTPYCQPDVFTYSILLKSCLHVQDFEKAKSVLSDMASQGIKP 792
Y RSG ++AFS+LE MK+ P CQPDV TYSIL+KSC+ V F+KAK++LS+M S GI P
Sbjct: 200 YGRSGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISP 259
Query: 791 NTITYNTLIDAYGKAKRFTEMESILVEMLRQRDCEPDVWTMNSTLRAFGGSGQIEMMENC 612
NTITYNTLIDAYGKAK F EME+ LV+ML Q++CEPDVWTMNSTLRAFG SGQIE ME C
Sbjct: 260 NTITYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKC 319
Query: 611 YDKFQSSGINPNIKTFNILLDSYGKTGNYEKMSSVMEYMQKYHFSWTLVTYNIVIDAFGR 432
Y+KFQ +GI P+I TFN+LLDSYGK G+Y+KMS+VMEYMQKYH+SWT++TYNIVIDAFGR
Sbjct: 320 YEKFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGR 379
Query: 431 AGDLKQMEFLFRLMQSERIKPNCVTLCSLIKAYGQAGKLEKIESILHYIENSDMTLDIVF 252
AGDLKQME+LFRLM+SERIKP+CVTLCSL++AYGQA K EKIE +L +IENSD+TLD VF
Sbjct: 380 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVF 439
Query: 251 FNSLVDAFGMMGCLAEMKGVLEMMEKKGCKPDKITYRTMIKAYSINGMSNQAKELLNVLA 72
FN LVDA+G MGC AEMKGVL +ME+KG +PDKITYRTMIKAYS GM+ KEL ++ A
Sbjct: 440 FNCLVDAYGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKELQDLEA 499
Query: 71 S 69
+
Sbjct: 500 A 500
>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 548 bits (1413), Expect = e-153
Identities = 259/364 (71%), Positives = 315/364 (86%)
Frame = -3
Query: 1151 QVFELLREQLWYRPNTGIYIKLIVMLGKCKQPVKAQLLFQEMIDDGCDVNSETYTALLSA 972
+VFELL EQ+WY+P+TG+YIKLIVMLGKCKQP KA LFQ M+D+GC ++ E+YTALLSA
Sbjct: 142 KVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTALLSA 201
Query: 971 YSRSGYFNEAFSILELMKKTPYCQPDVFTYSILLKSCLHVQDFEKAKSVLSDMASQGIKP 792
YSRSG ++AFS+LE MK TP CQPDV TYSILLKSCL V F+K +S+LSDM ++GIKP
Sbjct: 202 YSRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMTNRGIKP 261
Query: 791 NTITYNTLIDAYGKAKRFTEMESILVEMLRQRDCEPDVWTMNSTLRAFGGSGQIEMMENC 612
NT+TYNTLIDAYGKA++F+EMESILVEML R C+PDVWTMNSTLRAFG GQIE ME C
Sbjct: 262 NTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIETMEKC 321
Query: 611 YDKFQSSGINPNIKTFNILLDSYGKTGNYEKMSSVMEYMQKYHFSWTLVTYNIVIDAFGR 432
Y+KFQ++GI PN++TFNILLDSYGK +Y+KMS+VMEYMQKYH+SWT+VT+NIVIDAFG+
Sbjct: 322 YEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVIDAFGK 381
Query: 431 AGDLKQMEFLFRLMQSERIKPNCVTLCSLIKAYGQAGKLEKIESILHYIENSDMTLDIVF 252
AGDLKQME+LFRLM+SERIKP+CVTLCSL++AY +AGK EKI +L ++ENSD+ LD VF
Sbjct: 382 AGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVF 441
Query: 251 FNSLVDAFGMMGCLAEMKGVLEMMEKKGCKPDKITYRTMIKAYSINGMSNQAKELLNVLA 72
FN LVDA+ +GCLAEMKGVLEMM++ GCKPD +TYRTMIK Y+ GM + AKEL +L
Sbjct: 442 FNCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIVTYRTMIKTYTYKGMDSHAKELRELLP 501
Query: 71 SLKK 60
++ +
Sbjct: 502 TVNR 505
Score = 64.7 bits (156), Expect = 1e-07
Identities = 59/275 (21%), Positives = 121/275 (44%), Gaps = 2/275 (0%)
Frame = -3
Query: 1349 IYNFSKDRSI--DY*LRGLSPFTVNHNTLPNLTGVIPARSVLCLTLCITLQNF*SFCQVD 1176
++ F K +S+ D RG+ P TV +NTL + G S + L L + +CQ D
Sbjct: 241 VFAFDKIQSLLSDMTNRGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLAD--RYCQPD 298
Query: 1175 FDST*MCFQVFELLREQLWYRPNTGIYIKLIVMLGKCKQPVKAQLLFQEMIDDGCDVNSE 996
+W +T + G Q + +++ + G N +
Sbjct: 299 -----------------VWTMNST------LRAFGNIGQIETMEKCYEKFQNAGIQPNVQ 335
Query: 995 TYTALLSAYSRSGYFNEAFSILELMKKTPYCQPDVFTYSILLKSCLHVQDFEKAKSVLSD 816
T+ LL +Y ++ + + +++E M+K Y + T++I++ + D ++ + +
Sbjct: 336 TFNILLDSYGKAQDYKKMSAVMEYMQKYHYSW-TIVTFNIVIDAFGKAGDLKQMEYLFRL 394
Query: 815 MASQGIKPNTITYNTLIDAYGKAKRFTEMESILVEMLRQRDCEPDVWTMNSTLRAFGGSG 636
M S+ IKP+ +T +L+ AY +A + ++ +L + D D N + A+ G
Sbjct: 395 MRSERIKPSCVTLCSLVRAYARAGKPEKISGVL-RFVENSDVLLDTVFFNCLVDAYARLG 453
Query: 635 QIEMMENCYDKFQSSGINPNIKTFNILLDSYGKTG 531
+ M+ + + +G P+I T+ ++ +Y G
Sbjct: 454 CLAEMKGVLEMMKQNGCKPDIVTYRTMIKTYTYKG 488