BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011881
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript...    82   3e-20
gb|ABK28243.1| unknown [Arabidopsis thaliana]                          82   3e-20
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali...    82   3e-20
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    73   8e-20
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    70   3e-19

>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
           to a family of Arabidopsis thaliana predicted proteins,
           which have similarity to reverse transcriptases; see
           T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
           gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
           thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 332

 Score = 82.0 bits (201), Expect(2) = 3e-20
 Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 19/204 (9%)
 Frame = +3

Query: 24  LLKYKEVIREHVKVRIGDGVRDNFMYDSWLYRGYLNEVLSEVAKRFLRIEDKATVAKVMT 203
           + K + V R  +   +G GV   F +D+W+  G L EV+  +  R + +   A V   + 
Sbjct: 1   MCKLRVVARPFIVCEVGSGVTAKFWHDNWIGLGPLIEVIGPLGPRTVGLPIDAVVRDALR 60

Query: 204 SGRW-----PKGTELTVELKQL-KENLSVLKVDKKDRLTWG----GGGDCIRTKDIWKTL 353
              W          + V+LK L  E   +L     D   W        +       W  L
Sbjct: 61  GTSWWIASSRSRNPIIVQLKNLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSAL 120

Query: 354 HPVISKPEWVKLVWFKENIPRHIFLCWVLFQGKLPIKDRLKRWDVCDDDLCLFYGEQ--- 524
           HP      W K VWFK ++P+H F+CWV+   +L  +DRL+ W +     CL        
Sbjct: 121 HPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDS 180

Query: 525 ------ESVYGGIYWCIWMISGDL 578
                 E  + G+ W  +  S +L
Sbjct: 181 RAHLFFECQFSGVVWRFFTASTNL 204



 Score = 43.1 bits (100), Expect(2) = 3e-20
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +2

Query: 650 RLCFGCVVYEVWRERNKRLFEGVNREVE*IVQSYIVTIRSRV 775
           RL F   VY +WRERN+RL  GV+R  E I++   + IR+R+
Sbjct: 231 RLAFHSCVYAIWRERNQRLHSGVSRSTESILKDIQLIIRARL 272


>gb|ABK28243.1| unknown [Arabidopsis thaliana]
          Length = 297

 Score = 82.0 bits (201), Expect(2) = 3e-20
 Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 19/204 (9%)
 Frame = +3

Query: 24  LLKYKEVIREHVKVRIGDGVRDNFMYDSWLYRGYLNEVLSEVAKRFLRIEDKATVAKVMT 203
           + K + V R  +   +G GV   F +D+W+  G L EV+  +  R + +   A V   + 
Sbjct: 1   MCKLRVVARPFIVCEVGSGVTAKFWHDNWIGLGPLIEVIGPLGPRTVGLPIDAVVRDALR 60

Query: 204 SGRW-----PKGTELTVELKQL-KENLSVLKVDKKDRLTWG----GGGDCIRTKDIWKTL 353
              W          + V+LK L  E   +L     D   W        +       W  L
Sbjct: 61  GTSWWIASSRSRNPIIVQLKNLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSAL 120

Query: 354 HPVISKPEWVKLVWFKENIPRHIFLCWVLFQGKLPIKDRLKRWDVCDDDLCLFYGEQ--- 524
           HP      W K VWFK ++P+H F+CWV+   +L  +DRL+ W +     CL        
Sbjct: 121 HPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDS 180

Query: 525 ------ESVYGGIYWCIWMISGDL 578
                 E  + G+ W  +  S +L
Sbjct: 181 RAHLFFECQFSGVVWRFFTASTNL 204



 Score = 43.1 bits (100), Expect(2) = 3e-20
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +2

Query: 650 RLCFGCVVYEVWRERNKRLFEGVNREVE*IVQSYIVTIRSRV 775
           RL F   VY +WRERN+RL  GV+R  E I++   + IR+R+
Sbjct: 231 RLAFHSCVYAIWRERNQRLHSGVSRSTESILKDIQLIIRARL 272


>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
          Length = 296

 Score = 82.0 bits (201), Expect(2) = 3e-20
 Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 19/204 (9%)
 Frame = +3

Query: 24  LLKYKEVIREHVKVRIGDGVRDNFMYDSWLYRGYLNEVLSEVAKRFLRIEDKATVAKVMT 203
           + K + V R  +   +G GV   F +D+W+  G L EV+  +  R + +   A V   + 
Sbjct: 1   MCKLRVVARPFIVCEVGSGVTAKFWHDNWIGLGPLIEVIGPLGPRTVGLPIDAVVRDALR 60

Query: 204 SGRW-----PKGTELTVELKQL-KENLSVLKVDKKDRLTWG----GGGDCIRTKDIWKTL 353
              W          + V+LK L  E   +L     D   W        +       W  L
Sbjct: 61  GTSWWIASSRSRNPIIVQLKNLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSAL 120

Query: 354 HPVISKPEWVKLVWFKENIPRHIFLCWVLFQGKLPIKDRLKRWDVCDDDLCLFYGEQ--- 524
           HP      W K VWFK ++P+H F+CWV+   +L  +DRL+ W +     CL        
Sbjct: 121 HPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDS 180

Query: 525 ------ESVYGGIYWCIWMISGDL 578
                 E  + G+ W  +  S +L
Sbjct: 181 RAHLFFECQFSGVVWRFFTASTNL 204



 Score = 43.1 bits (100), Expect(2) = 3e-20
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +2

Query: 650 RLCFGCVVYEVWRERNKRLFEGVNREVE*IVQSYIVTIRSRV 775
           RL F   VY +WRERN+RL  GV+R  E I++   + IR+R+
Sbjct: 231 RLAFHSCVYAIWRERNQRLHSGVSRSTESILKDIQLIIRARL 272


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 72.8 bits (177), Expect(2) = 8e-20
 Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 7/174 (4%)
 Frame = +3

Query: 6    SSIWRQLLKYKEVIREHVKVRIGDGVRDNFMYDSWLYRGYLNEVLSEVAKRFLRIEDKAT 185
            SS W ++LK + +    +K  IGDG+  +  +D+W     L +   E   RF+     A 
Sbjct: 747  SSAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGE---RFIYDSGMAK 803

Query: 186  VAKV---MTSGRWPKGTELTVELKQLKENL---SVLKVDKKDRLTW-GGGGDCIRTKDIW 344
             AKV   + +  W   T   +    + E +   S  K+ +KD + W          K  W
Sbjct: 804  NAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVKVAW 863

Query: 345  KTLHPVISKPEWVKLVWFKENIPRHIFLCWVLFQGKLPIKDRLKRWDVCDDDLC 506
            + L       EW  +VWFK  +PRH FL W++ Q KL  +D+L R+ +   + C
Sbjct: 864  EQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRC 917



 Score = 50.8 bits (120), Expect(2) = 8e-20
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
 Frame = +2

Query: 527  ECIWRNILVYLDDFRRSWG*EEERRIAVSYYRGKSFKKRLRRLCFGCVVYEVWRERNKRL 706
            + IW ++    D  R + G +E  R A   + GKSF    R+L F   VY VW+ERN R+
Sbjct: 938  KAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFINFSRKLSFAATVYHVWQERNARI 997

Query: 707  FEGVNR-------EVE*IVQSYIVTIRSRVCSWKIPRNRTNWQI 817
            F G++R       ++E I++  +  +R+ V + +  R +  W++
Sbjct: 998  FAGLSRTSNLVFNQIECIIRDKLDLMRNVVPTNENKRIQRAWRV 1041


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 70.5 bits (171), Expect(2) = 3e-19
 Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 7/171 (4%)
 Frame = +3

Query: 15  WRQLLKYKEVIREHVKVRIGDGVRDNFMYDSWLYRGYLNEVLSEVAKRFLRIEDKATVAK 194
           W ++LK + +    +K  IGDG+  +  +D+W     L +   E   RF+     A  AK
Sbjct: 35  WGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGE---RFIYDSGMAKNAK 91

Query: 195 V---MTSGRWPKGTELTVELKQLKENL---SVLKVDKKDRLTW-GGGGDCIRTKDIWKTL 353
           V   + +  W   T   +    + E +   S  K+ +KD + W          K  W+ L
Sbjct: 92  VNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVKVAWEQL 151

Query: 354 HPVISKPEWVKLVWFKENIPRHIFLCWVLFQGKLPIKDRLKRWDVCDDDLC 506
                  EW  +VWFK  +PRH FL W++ Q KL  +D+L R+ +   + C
Sbjct: 152 RRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRC 202



 Score = 51.2 bits (121), Expect(2) = 3e-19
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
 Frame = +2

Query: 527 ECIWRNILVYLDDFRRSWG*EEERRIAVSYYRGKSFKKRLRRLCFGCVVYEVWRERNKRL 706
           + IW ++    D  R + G +E  R A   + GKSF    R+L F   VY VW+ERN R+
Sbjct: 223 KAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHVWQERNARI 282

Query: 707 FEGVNR-------EVE*IVQSYIVTIRSRVCSWKIPRNRTNWQI 817
           F G++R       ++E I++  +  +R+ V + +  R +  W++
Sbjct: 283 FAGLSRTSNLVFNQIECIIRDKLDLMRNVVPTNENKRIQRAWRV 326