BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00011856
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]              124   4e-26
gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japo...    88   3e-15
ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thalia...    84   8e-14
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    84   8e-14
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S...    82   3e-13

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score =  124 bits (311), Expect = 4e-26
 Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 4/290 (1%)
 Frame = +1

Query: 7    SPDGLFSFKATYEDLRHQGASSALYAAIWHNNIPKKTSFLAWRLMRGCLPVDEVMQEKGI 186
            S +G F+ K+ Y D  +    + +   IWH   P K SFL WRL++  LP  + + +   
Sbjct: 543  SENGHFTTKSAYVDCSNTREKNDMRNKIWHGKFPFKMSFLTWRLVQNKLPFYDTVGKFVD 602

Query: 187  QMVSKCQCCQQV--ETVEHVFYSNQIADQIWAHFAQIVGIRHPRFNSIQQILTTWSLSVA 360
             + S C CC+ +  ET+ HVF ++ +A  +W  F   +GI     ++I  + T W++   
Sbjct: 603  NIDSNCVCCKNMKTETINHVFLNSDVASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTH 662

Query: 361  TQGH--IRQVIPMVILWALWEARNKAKHTVARYSFTQICQRVLSILIANGKANMTHAKFW 534
               H  I   +P++I W +W+ R   K+   +  + +  +  +   +      MT   F 
Sbjct: 663  NSIHNVIIHTLPILIFWEIWKRRCACKYGDQKKMWYRTMENHVWWNLKMS-LRMTFPSFE 721

Query: 535  TGDSYIASKLGAHTLVKHRQRPILLSWTRPTQGTLKLNIDAAFKDGKADYGGILRNDQGG 714
             G+S+    L     ++   +  ++ W  P    +K+N D +F  G A  G I+R+    
Sbjct: 722  IGNSW-RDLLNKVESLRPYPKWKIVHWNTPNINCVKINTDGSFSSGNAGLGWIVRDHTRR 780

Query: 715  LVCAKGIYGLCSSPLKAEVEALLYILQWCIHKGYNKMQIEVDSLQLVHMI 864
            ++ A  I   CSS   AE  A  + + WC+ +G++   +E+DS  +V M+
Sbjct: 781  MIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYLELDSKLVVDMV 830


>gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group]
          Length = 613

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 88/344 (25%), Positives = 145/344 (42%), Gaps = 28/344 (8%)
 Frame = +1

Query: 10   PDGLFSFKATYEDLRHQGASSAL-----------------YAAIWH-NNIPKKTSFLAWR 135
            P G+FS K+ Y  L +Q    A+                 +  +W  N++PK   FL WR
Sbjct: 251  PRGIFSVKSAYHTLEYQRDRQAIRQTGESSSGKTSSAALQWEKLWRLNHLPKVKHFL-WR 309

Query: 136  LMRGCLPVDEVMQEKGIQMVSKCQCCQQV-ETVEHVFYSNQIADQIWAHFAQIVGIRHPR 312
            L    LP+ + + ++G+++ ++C  C ++ E   H F+  +     W         R   
Sbjct: 310  LAHNSLPLRQNISKRGMEIDTRCPVCLRLDENGGHCFFKCKFVKPCW---------RMLN 360

Query: 313  FNSIQQILTTWSLSVATQGHIRQV------IPMVILWALWEARNKAKHTVARYSFTQICQ 474
            F  I+Q L+  + ++    HI  +        +++LW  W+ARNK      R +  ++  
Sbjct: 361  FEHIRQELSLQTSTLDVCKHILNLREDIMLTTVILLWNWWDARNKVNAGEDRRTHEEVYS 420

Query: 475  RVLSILIANGKANMTHAKFWTGDSYIASKLGAHTLVKHRQRPILLSWTRPTQGTLKLNID 654
            RV+ ++  N       A+   G+    S                 +W  P Q  LKLNID
Sbjct: 421  RVIRMVSENSLLFRDKAR---GNPSSQS-----------------TWCPPPQCVLKLNID 460

Query: 655  AAFKDG--KADYGGILRNDQG-GLVCAKGIYGLCSSPLKAEVEALLYILQWCIHKGYNKM 825
             AF+       +G ILR+ +G G++   G   L    L AE  A L+ L+  ++ G++  
Sbjct: 461  GAFQAANLSGGWGFILRDHEGNGVLARAGRIELVHDALSAEAVACLHALRAVLNHGFSYF 520

Query: 826  QIEVDSLQLVHMITGKIAHWQLYNKLTHIRTFLSSFGSHIRTLL 957
             +E DS  LV  +         Y++ T   TF       IRTLL
Sbjct: 521  SVETDSSILVSALDS-----ACYDQSTAGVTF-----KQIRTLL 554


>ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
           protein [Arabidopsis thaliana]
           gi|332643482|gb|AEE77003.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 343

 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 73/298 (24%), Positives = 121/298 (40%), Gaps = 14/298 (4%)
 Frame = +1

Query: 82  AAIWHNNIPKKTSFLAWRLMRGCLPVDEVMQEKGIQMVSKC-QCCQQVETVEHVFYSNQI 258
           A IW      K     W+L+ G L   + ++ + I+   +C +CCQ+ ET +H+F+    
Sbjct: 16  AKIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFY 75

Query: 259 ADQIWAHFAQIVGIRHPRFNSIQQILTT---WSLSVATQGHIRQVIPMV--ILWALWEAR 423
           A Q+W    +  GI H    +    + T     LS        Q+  +   ILW LW++R
Sbjct: 76  AQQVW----RASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSR 131

Query: 424 NKAKHTVARYSFTQICQRVLSILIANGKANMTHAKFWTGDSYIASKLGAHTLVKHRQRPI 603
           N+        S+    QR                + W   +     L         Q+P 
Sbjct: 132 NQLVFQQKSISWQNTLQRA-----------RNDVQEWEDTNTYVQSLNQQVHSSRHQQPT 180

Query: 604 L--LSWTRPTQGTLKLNIDAAF----KDGKADYGGILRNDQGGLVCAKG--IYGLCSSPL 759
           +    W RP    +K N D AF    ++ KA   G L  D+ G+    G  I    S  L
Sbjct: 181 MARTKWQRPPSTWIKYNYDGAFNHQTRNAKA---GWLMRDENGVYMGSGQAIGSTTSDSL 237

Query: 760 KAEVEALLYILQWCIHKGYNKMQIEVDSLQLVHMITGKIAHWQLYNKLTHIRTFLSSF 933
           ++E +AL+  +Q    +GY K+  E DS Q+  ++  +  ++  +N +   R +   F
Sbjct: 238 ESEFQALIIAMQHAWSQGYRKVIFEGDSKQVEELMNNEKLNFGRFNWIREGRFWQKRF 295


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 78/300 (26%), Positives = 128/300 (42%), Gaps = 20/300 (6%)
 Frame = +1

Query: 88   IWHNNIPKKTSFLAWRLMRGCLPVDEVMQEKGIQMVSKCQ-CCQQVETVEHVFYSNQIAD 264
            IW   I  K     WR + G L     ++ + I     CQ CC   ET+ H+ ++   A 
Sbjct: 1388 IWRLKITPKIKHFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQ 1447

Query: 265  QIWAHFAQIVGIRHPRFNSIQQILTTWSLS----VATQGHIRQVIPMV-------ILWAL 411
             +W         R   F+   ++  T +L     +  QG   Q +P++       I+W L
Sbjct: 1448 VVW---------RSANFSGSNRLCFTDNLEENIRLILQGKKNQNLPILNGLMPFWIMWRL 1498

Query: 412  WEARNKAKHTVARYSFTQICQRVLSILIANGKANMTHAKFWTGDSYIASKLGAHTLVKHR 591
            W++RN+       Y F Q+ +    +     +     A  W  ++ +     +H   +  
Sbjct: 1499 WKSRNE-------YLFQQLDRFPWKV----AQKAEQEATEWV-ETMVNDTAISHNTAQSN 1546

Query: 592  QRPILLS--WTRPTQGTLKLNIDAAFKDGKADY---GGILRNDQGGLV---CAKGIYGLC 747
             RP+  S  W+ P +G LK N D+ +  G+ DY   G ILR+  G ++   CAK      
Sbjct: 1547 DRPLSRSKQWSSPPEGFLKCNFDSGYVQGR-DYTSTGWILRDCNGRVLHSGCAK--LQQS 1603

Query: 748  SSPLKAEVEALLYILQWCIHKGYNKMQIEVDSLQLVHMITGKIAHWQLYNKLTHIRTFLS 927
             S L+AE    L+ LQ    +GY  +  E D+L+L ++I     H  L   L  IR +++
Sbjct: 1604 YSALQAEALGFLHALQMVWIRGYCYVWFEGDNLELTNLINKTEDHHLLETLLYDIRFWMT 1663


>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
           gi|241920472|gb|EER93616.1| hypothetical protein
           SORBIDRAFT_01g011130 [Sorghum bicolor]
          Length = 463

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 73/308 (23%), Positives = 135/308 (43%), Gaps = 25/308 (8%)
 Frame = +1

Query: 16  GLFSFKATYEDLR-----------HQGASS----ALYAAIWHNNIPKKTSFLAWRLMRGC 150
           G+FS K+ Y+  R            QG S+    +L+  +W  + P K     WR +   
Sbjct: 106 GVFSVKSAYKVARDTYIRNHTSQGQQGGSNPGPLSLWKRVWKLSCPNKIKHFLWRFLHNS 165

Query: 151 LPVDEVMQEKGIQMVSKCQCCQQV-ETVEHVFYSNQIADQIWAHFAQIVGIRHPRFNSIQ 327
            P+ + +  +G+++V +C  C QV E   H+F+   +A Q+W    +++G+   R     
Sbjct: 166 HPLRDNLIRRGMEIVPRCPVCNQVGEDGGHLFFKCGMARQVW----ELLGLSTER----- 216

Query: 328 QILTTWSLSVATQGHI------RQVIPMVILWALWEARNKAKHTVARYSFTQICQRVLSI 489
           ++L  +   +     I      R+++ +V LW  W  RN  +    R S  Q   R + +
Sbjct: 217 EVLANFYTPIDVVEFILRASESRKLMMIVALWYTWSERNAIREEDRRRS-PQTLARCVEL 275

Query: 490 LIANGKANMTHAKFWTGDSYIASKLGAHTLVKHRQRPILLSWTRPTQGTLKLNIDAAFK- 666
            +   +   T A                T  + +Q+     W++P    LKLN D +F  
Sbjct: 276 YVQEMRTTETTAN--------------PTANQEQQQ---YKWSKPPVDILKLNCDGSFSP 318

Query: 667 DGKADYGGILRNDQGG--LVCAKGIYGLCSSPLKAEVEALLYILQWCIHKGYNKMQIEVD 840
           + +A   G+L  D  G  ++  +G      +P++AE+ A L  +Q   + G  ++ +E D
Sbjct: 319 ETRAGSWGVLIRDHEGDVIMSGRGRVNHLMTPMQAELIACLQGVQLAANLGIGRLILETD 378

Query: 841 SLQLVHMI 864
           +L++V  I
Sbjct: 379 ALEVVKAI 386